; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG02G022360 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG02G022360
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPoly(A)-specific ribonuclease
Genome locationCG_Chr02:36782326..36783391
RNA-Seq ExpressionClCG02G022360
SyntenyClCG02G022360
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]4.6e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]4.6e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]4.6e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]3.6e-7160.23Show/hide
Query:  RQVWDFNL-----------IQSPPPSMDTEFPGVLI---------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD
        RQVWDFNL            + P  SMDTEFPGV+I         RPSDHYLLLKS+VDALNLIQ+GLTL           T   FIWEFNFRDFDV RD
Subjt:  RQVWDFNL-----------IQSPPPSMDTEFPGVLI---------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL
        LHAPDSI LLKRQGIDFERNR+HGV                         HS+  F                          FGNKVYDVKHMMRFCDGL
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL

Query:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        YGGLDRVA TLAVDRAVGK HQAGSD LLTWQAFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

TrEMBL top hitse value%identityAlignment
A0A0A0KI60 Poly(A)-specific ribonuclease2.0e-6455.6Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLI---------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD
        RQVWD NL+             P  S+DTEFPGVLI         RPSDHYLLLKS+VDALNLIQLGLTL           T  +FIWEFNFRDFDVARD
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLI---------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL
         HAPDSI LLK+QGIDF RNR HGV                         HS+  F                          FG KVYDVKHMMRFCDGL
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL

Query:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        YGGLDR+A TL +DRAVGK HQAGSD LLT+QAF+KM DVYF KDGP+KHAGVL+GLE+
Subjt:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

A0A1S3BNU2 Poly(A)-specific ribonuclease5.4e-6555.98Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR---------PSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD
        RQVWD NL+             P  S+DTEFPGVLIR         PSDHYLLLKS+VDALNLIQLGLTL           T  +FIWEFNFRDFDVAR 
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR---------PSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL
         H P SI LLK+QGIDF RNR HGV                         HS+  F                          FGNKVYDVKHMMRFCDGL
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL

Query:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        YGGLDRVA TL ++RAVGK HQAGSD LLTWQAF+KMRDVYF KDGPEKHAGVL+GLE+
Subjt:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

A0A5D3B887 Poly(A)-specific ribonuclease5.4e-6555.98Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR---------PSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD
        RQVWD NL+             P  S+DTEFPGVLIR         PSDHYLLLKS+VDALNLIQLGLTL           T  +FIWEFNFRDFDVAR 
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR---------PSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL
         H P SI LLK+QGIDF RNR HGV                         HS+  F                          FGNKVYDVKHMMRFCDGL
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCDGL

Query:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        YGGLDRVA TL ++RAVGK HQAGSD LLTWQAF+KMRDVYF KDGPEKHAGVL+GLE+
Subjt:  YGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

A0A6J1GZY2 Poly(A)-specific ribonuclease2.2e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

A0A6J1K4S7 Poly(A)-specific ribonuclease2.2e-7157.99Show/hide
Query:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF
        +LI H     H R+VWDFNL              P  SMDTEFPGV++       RPSDHYLLLKS+VDALNLIQ+GLTL           T + FIWEF
Subjt:  ILIPH----FHFRQVWDFNLIQS-----------PPPSMDTEFPGVLI-------RPSDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEF

Query:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV
        NFRDFDV RDLHAPDSI LLKRQGIDFERNR HGV S+                                                    AFFGNKVYDV
Subjt:  NFRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDV

Query:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        KHMMRFCD LYGGL+RVA TLAVDRAVGKCHQAGSD LLTW AFQKMRDVYF KDGPEKHAGVLYGLEV
Subjt:  KHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 112.3e-5749.05Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR----------PSDHYLLLKSDVDALNLIQLGLTL------------RTHQTFIWEFNFRDFDV
        R VW +NL              P  SMDTEFPGV+ +          P+  Y LLKS+VDAL+LIQ+GLTL            + ++ +IWEFNFRDFDV
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR----------PSDHYLLLKSDVDALNLIQLGLTL------------RTHQTFIWEFNFRDFDV

Query:  ARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDVKHMMRFC
         RD HAPDSI LL+R GIDFERNR  GV S                                                     AFFG++VYDVKH+MRFC
Subjt:  ARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDVKHMMRFC

Query:  D-GLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        +  LYGGLDRVA +L V+RAVGKCHQAGSD LLTWQAFQ+MRD+YF++DG EKHAGVLYGLEV
Subjt:  D-GLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Q9LEU4 Probable CCR4-associated factor 1 homolog 105.6e-3535.8Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARDL
        R+VWD+NL++               +MDTEFPGV+++P          +Y  LK +VD L LIQ+GLT            T +  IW+FNFR+F++  D+
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARDL

Query:  HAPDSIHLLKRQGIDFERNRVHGVH-------------------SSLAFFGN-------------------------------KVYDVKHMMRFCDGLYG
        +A +SI LL++ GIDF++N   G+                    S + F G                                 VYD+KH+M FC+GL+G
Subjt:  HAPDSIHLLKRQGIDFERNRVHGVH-------------------SSLAFFGN-------------------------------KVYDVKHMMRFCDGLYG

Query:  GLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        GL+R+A  + V+R VG CHQAGSD LLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  GLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Q9LXM2 Probable CCR4-associated factor 1 homolog 93.2e-5951.15Show/hide
Query:  RQVW------DFNLIQS-----PPPSMDTEFPGVLIR-------PSDHYLLLKSDVDALNLIQLGLTLR------------THQTFIWEFNFRDFDVARD
        R+VW      +F LI       P  SMDTEFPGV+ +       P D Y LLK++VDAL+LIQ+GLTL              H+ FIWEFNFRDFDVARD
Subjt:  RQVW------DFNLIQS-----PPPSMDTEFPGVLIR-------PSDHYLLLKSDVDALNLIQLGLTLR------------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCD-G
         HAPDSI LL+RQGIDFERN   GV                         HS+  F                          FG +VYDVKHMM+FC+  
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCD-G

Query:  LYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        L+GGLDRVA TL V+RAVGKCHQAGSD LLTW AFQ+MRD+YF++DGPEKHAGVLYGLEV
Subjt:  LYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.3e-3335.21Show/hide
Query:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF
        F+       R+VW+ NL +            P  +MDTEFPG+++RP          HY  LK++V+ L +IQLGLT            T +  IW+FNF
Subjt:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF

Query:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM
        R+FD+  D+ A DSI LLK+ GID  +N + G+                         HS   F                         +   VYD+KH+
Subjt:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM

Query:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        M+FC+ L+GGL+++A  L V+R VG CHQAGSD LLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.1e-3333.71Show/hide
Query:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTL-----------RTHQTFIWEFN
        F+       R+VW+ NL              P  +MDTEFPG++ RP          HY  LK++V+ L +IQLGLT              ++  IW+FN
Subjt:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTL-----------RTHQTFIWEFN

Query:  FRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS--------------------------------------------------LAFFGNKVYDVKH
        FR+FD+  D++A DSI LL++ GIDF +N   G+ S                                                   ++ +  +VYD+KH
Subjt:  FRDFDVARDLHAPDSIHLLKRQGIDFERNRVHGVHSS--------------------------------------------------LAFFGNKVYDVKH

Query:  MMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        +M+FC+ L+GGL+++A  L V+R VG CHQAGSD LLT   F+K+++ +F+    EK++GVLYGL V
Subjt:  MMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-3435.21Show/hide
Query:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF
        F+       R+VW+ NL +            P  +MDTEFPG+++RP          HY  LK++V+ L +IQLGLT            T +  IW+FNF
Subjt:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF

Query:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM
        R+FD+  D+ A DSI LLK+ GID  +N + G+                         HS   F                         +   VYD+KH+
Subjt:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM

Query:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        M+FC+ L+GGL+++A  L V+R VG CHQAGSD LLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-3435.21Show/hide
Query:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF
        F+       R+VW+ NL +            P  +MDTEFPG+++RP          HY  LK++V+ L +IQLGLT            T +  IW+FNF
Subjt:  FILIPHFHFRQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNF

Query:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM
        R+FD+  D+ A DSI LLK+ GID  +N + G+                         HS   F                         +   VYD+KH+
Subjt:  RDFDVARDLHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF-------------------------FGNKVYDVKHM

Query:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV
        M+FC+ L+GGL+++A  L V+R VG CHQAGSD LLT   F+K+++ +F+  GP  K++GVLYGL V
Subjt:  MRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGP-EKHAGVLYGLEV

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-6051.15Show/hide
Query:  RQVW------DFNLIQS-----PPPSMDTEFPGVLIR-------PSDHYLLLKSDVDALNLIQLGLTLR------------THQTFIWEFNFRDFDVARD
        R+VW      +F LI       P  SMDTEFPGV+ +       P D Y LLK++VDAL+LIQ+GLTL              H+ FIWEFNFRDFDVARD
Subjt:  RQVW------DFNLIQS-----PPPSMDTEFPGVLIR-------PSDHYLLLKSDVDALNLIQLGLTLR------------THQTFIWEFNFRDFDVARD

Query:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCD-G
         HAPDSI LL+RQGIDFERN   GV                         HS+  F                          FG +VYDVKHMM+FC+  
Subjt:  LHAPDSIHLLKRQGIDFERNRVHGV-------------------------HSSLAF--------------------------FGNKVYDVKHMMRFCD-G

Query:  LYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        L+GGLDRVA TL V+RAVGKCHQAGSD LLTW AFQ+MRD+YF++DGPEKHAGVLYGLEV
Subjt:  LYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-3635.8Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARDL
        R+VWD+NL++               +MDTEFPGV+++P          +Y  LK +VD L LIQ+GLT            T +  IW+FNFR+F++  D+
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIRP--------SDHYLLLKSDVDALNLIQLGLTLR----------THQTFIWEFNFRDFDVARDL

Query:  HAPDSIHLLKRQGIDFERNRVHGVH-------------------SSLAFFGN-------------------------------KVYDVKHMMRFCDGLYG
        +A +SI LL++ GIDF++N   G+                    S + F G                                 VYD+KH+M FC+GL+G
Subjt:  HAPDSIHLLKRQGIDFERNRVHGVH-------------------SSLAFFGN-------------------------------KVYDVKHMMRFCDGLYG

Query:  GLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        GL+R+A  + V+R VG CHQAGSD LLT  +F+K+++ YF     EK+ GVLYGL V
Subjt:  GLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-5849.05Show/hide
Query:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR----------PSDHYLLLKSDVDALNLIQLGLTL------------RTHQTFIWEFNFRDFDV
        R VW +NL              P  SMDTEFPGV+ +          P+  Y LLKS+VDAL+LIQ+GLTL            + ++ +IWEFNFRDFDV
Subjt:  RQVWDFNLIQS-----------PPPSMDTEFPGVLIR----------PSDHYLLLKSDVDALNLIQLGLTL------------RTHQTFIWEFNFRDFDV

Query:  ARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDVKHMMRFC
         RD HAPDSI LL+R GIDFERNR  GV S                                                     AFFG++VYDVKH+MRFC
Subjt:  ARDLHAPDSIHLLKRQGIDFERNRVHGVHSS---------------------------------------------------LAFFGNKVYDVKHMMRFC

Query:  D-GLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV
        +  LYGGLDRVA +L V+RAVGKCHQAGSD LLTWQAFQ+MRD+YF++DG EKHAGVLYGLEV
Subjt:  D-GLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATGTGCTTTTGCGTTGCAACTGGGAAGCATCTACGTCCATTCCTTCATTCTCATCCCACACTTTCACTTCCGTCAGGTCTGGGATTTCAATCTCATCCAATCGCCTCC
TCCATCCATGGACACTGAATTCCCCGGCGTCCTCATCCGCCCCTCCGATCACTACCTTCTCCTCAAGTCCGACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACCC
TCCGCACCCACCAGACCTTCATTTGGGAGTTCAATTTTAGGGATTTCGACGTCGCTCGTGACCTTCACGCGCCCGATTCCATCCATCTCTTGAAACGACAGGGCATTGAT
TTCGAACGCAACAGAGTTCACGGGGTTCACTCTTCTTTGGCCTTCTTTGGGAATAAGGTTTATGACGTCAAGCATATGATGCGGTTCTGTGATGGCCTTTATGGAGGCTT
GGACCGGGTTGCTAACACGCTTGCGGTGGACCGGGCGGTCGGAAAATGCCACCAAGCCGGTTCTGATGGCTTGCTGACGTGGCAAGCTTTCCAGAAGATGAGGGACGTCT
ATTTCTTAAAGGATGGGCCGGAGAAGCACGCCGGCGTTTTGTATGGATTAGAAGTGTGT
mRNA sequenceShow/hide mRNA sequence
AAATGTGCTTTTGCGTTGCAACTGGGAAGCATCTACGTCCATTCCTTCATTCTCATCCCACACTTTCACTTCCGTCAGGTCTGGGATTTCAATCTCATCCAATCGCCTCC
TCCATCCATGGACACTGAATTCCCCGGCGTCCTCATCCGCCCCTCCGATCACTACCTTCTCCTCAAGTCCGACGTCGACGCTCTCAACCTAATCCAACTCGGTCTCACCC
TCCGCACCCACCAGACCTTCATTTGGGAGTTCAATTTTAGGGATTTCGACGTCGCTCGTGACCTTCACGCGCCCGATTCCATCCATCTCTTGAAACGACAGGGCATTGAT
TTCGAACGCAACAGAGTTCACGGGGTTCACTCTTCTTTGGCCTTCTTTGGGAATAAGGTTTATGACGTCAAGCATATGATGCGGTTCTGTGATGGCCTTTATGGAGGCTT
GGACCGGGTTGCTAACACGCTTGCGGTGGACCGGGCGGTCGGAAAATGCCACCAAGCCGGTTCTGATGGCTTGCTGACGTGGCAAGCTTTCCAGAAGATGAGGGACGTCT
ATTTCTTAAAGGATGGGCCGGAGAAGCACGCCGGCGTTTTGTATGGATTAGAAGTGTGT
Protein sequenceShow/hide protein sequence
KCAFALQLGSIYVHSFILIPHFHFRQVWDFNLIQSPPPSMDTEFPGVLIRPSDHYLLLKSDVDALNLIQLGLTLRTHQTFIWEFNFRDFDVARDLHAPDSIHLLKRQGID
FERNRVHGVHSSLAFFGNKVYDVKHMMRFCDGLYGGLDRVANTLAVDRAVGKCHQAGSDGLLTWQAFQKMRDVYFLKDGPEKHAGVLYGLEVC