CuGenDBv2

Gene ID	ClCG02G024200
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	CG_Chr02:38501381..38505312
RNA-Seq Expression	ClCG02G024200
Synteny	ClCG02G024200
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449859.1 PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo]

1.5e-154

88.1

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F RITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNISALNLQLENQLGD G +SQV P AFKNFS S KEKTI+ELAQDKWL+CTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC+SE CTVRVHRYCLKKMLSNKKSKRACPGCGTRW+ST SN+ES+EE +EPDTR QDQPSS++RKKS+L++DIDL PNEDSTAEASQPPPD
Subjt:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSTRQ
        +RRATR+STRQ
Subjt:  SRRATRSSTRQ

XP_022153726.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia]

6.2e-148

85.58

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YKAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD GS+ SQV PPAFKNFSISLKEKTI+ELAQD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC++EGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSTRQ
        ++RR TRSS RQ
Subjt:  DSRRATRSSTRQ

XP_022153728.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia]

6.2e-148

85.58

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YKAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD GS+ SQV PPAFKNFSISLKEKTI+ELAQD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC++EGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSTRQ
        ++RR TRSS RQ
Subjt:  DSRRATRSSTRQ

XP_038900598.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida]

1.8e-155

89.46

Show/hide

Query:  GFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
        GF MPELSWRHHTLIQALLARGPLREDHFH +FTRITG TPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
Subjt:  GFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ

Query:  IAFYKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSC
        IAFYKAIVEAIAQDPSAQGGISNISALNLQLENQ+GD GS+SQV P AFKNFSISLKEKTI+ELAQDKWL+C+PDGFVNLGVRSFLDLRSWFRSNDVPSC
Subjt:  IAFYKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSC

Query:  EVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQP
        EVCNEAGVKAELCN+E CTVRVHRYCLKKMLSNKKSKRACPGCG +WRST SN+ESREEE+EPDT  QDQPSS++RKKSRL+IDIDL  NED  AEA QP
Subjt:  EVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQP

Query:  PPDSRRATRSSTR
        P  SRRATR S R
Subjt:  PPDSRRATRSSTR

XP_038900599.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida]

3.4e-154

89.68

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQALLARGPLREDHFH +FTRITG TPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        YKAIVEAIAQDPSAQGGISNISALNLQLENQ+GD GS+SQV P AFKNFSISLKEKTI+ELAQDKWL+C+PDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELCN+E CTVRVHRYCLKKMLSNKKSKRACPGCG +WRST SN+ESREEE+EPDT  QDQPSS++RKKSRL+IDIDL  NED  AEA QPP  
Subjt:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSTR
        SRRATR S R
Subjt:  SRRATRSSTR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ19 Non-structural maintenance of chromosomes element 1 homolog

2.9e-151

86.82

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F +ITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA 
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQD SAQGGISNISALNLQLENQLGD GS+SQV P AFKNFS S KEKTI+ELAQDKWL+CTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC++E CTVRVH+YCLKKMLSNKKSK+ACPGCGTRW+STTSN+E +EEE+EPDTR QDQPSS++RKKSRL++DIDL PNEDSTAEASQPPP 
Subjt:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSTRQ
        +RR TRSS RQ
Subjt:  SRRATRSSTRQ

A0A1S3BMD8 Non-structural maintenance of chromosomes element 1 homolog

7.4e-155

88.1

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MPELSWRHHTLIQ+LL+RGPLRED FH +F RITG TPDNDQQ+FNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC
        +KAIVEAIAQDPSAQGGISNISALNLQLENQLGD G +SQV P AFKNFS S KEKTI+ELAQDKWL+CTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVC
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVC

Query:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD
        NEAGVKAELC+SE CTVRVHRYCLKKMLSNKKSKRACPGCGTRW+ST SN+ES+EE +EPDTR QDQPSS++RKKS+L++DIDL PNEDSTAEASQPPPD
Subjt:  NEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPPD

Query:  SRRATRSSTRQ
        +RRATR+STRQ
Subjt:  SRRATRSSTRQ

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

3.0e-148

85.58

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YKAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD GS+ SQV PPAFKNFSISLKEKTI+ELAQD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC++EGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSTRQ
        ++RR TRSS RQ
Subjt:  DSRRATRSSTRQ

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

3.0e-148

85.58

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YKAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD GS+ SQV PPAFKNFSISLKEKTI+ELAQD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC++EGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSTRQ
        ++RR TRSS RQ
Subjt:  DSRRATRSSTRQ

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

3.0e-148

85.58

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M ELSWRHHTLIQALLARGPLRED FH +FTRITG +PDNDQQLFN+YLL INKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        YKAIVEAIAQDPSAQGGISNI+AL+LQLENQLGD GS+ SQV PPAFKNFSISLKEKTI+ELAQD+WLNCTPDGFVNLGVRSFLDLRSWFR+ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSR-SQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP
        CNEAGVKAELC++EGCTVRVH+YCLKKMLSNKKSKRACPGCGT+WRST +NMES+EEE+EPD R Q Q SS RRKKSRL+ID+D + N    A ASQPPP
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPPP

Query:  DSRRATRSSTRQ
        ++RR TRSS RQ
Subjt:  DSRRATRSSTRQ

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

7.6e-08

Show/hide

Query:  ELSWRHHTLIQALLARGPL-----REDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ
        +++  H   +Q L++ G +     R  H H           DN     + ++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  +
Subjt:  ELSWRHHTLIQALLARGPL-----REDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQ

Query:  IAFYKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISEL----AQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--
        +  ++  +E I    S  G    IS LNL  E Q                  S  +K+K + +L     QDKWL    +G   L  R  ++L  +  +  
Subjt:  IAFYKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISEL----AQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--

Query:  NDVPS-CEVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSR
         DV   C VC++  ++ +LC  E C + +H  C   +     +   CP C   W     ++   +  ++  + +Q  P   R ++SR
Subjt:  NDVPS-CEVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSR

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.1e-09

23.13

Show/hide

Query:  HHTLIQALLARG-----PLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYK
        H   +QAL++ G      +R  H H           D      + ++  +N+ L      +     + DG  YY LVN V ++ +K+ + Y+  ++  ++
Subjt:  HHTLIQALLARG-----PLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYK

Query:  AIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISEL----AQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--NDVPS
          +E I    S  G  ++IS LNL  E Q                  S  +K+K + +L     Q+KWL    +G   L  R  ++L  + R+   DV  
Subjt:  AIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISEL----AQDKWLNCTPDGFVNLGVRSFLDLRSWFRS--NDVPS

Query:  -CEVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKS
         C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W     ++     +    ++ +     N+R K+
Subjt:  -CEVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

3.5e-93

56.31

Show/hide

Query:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E  FHS+FT +TG  P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRS-QVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV
        +K I+EAIAQD +AQG IS+  ALN++LENQ+    S S Q  PPAFKNFS++ KEKT+ EL +DKWL  T +  + LG+RS LDLRSWFR+NDVPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRS-QVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEV

Query:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRW-RSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPP
        CNEAGVKA+LC +EGC VR+H+YCLKK+LS +  KR C GCG  W  S  +  E+ EE    +  ++ Q ++ + K+ R   D   E      + AS   
Subjt:  CNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRW-RSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAEASQPP

Query:  PDSRRATRS
         ++RR TRS
Subjt:  PDSRRATRS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAATTTAATCACTGCCACTGGGCGCGAGTTTATAGAGAGGGAGGGGGCGGTATTTCCCGCGTTTTGAACTCGTATTTCCTTCGGGAAACTTCACTCCCGGGGTTCAC
AATGCCAGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTACTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTCGGTGTTTACGCGAATCACTGGAAATA
CTCCAGATAATGACCAGCAGCTTTTTAATAGTTACCTCCTGACCATTAATAAAGCACTCTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGT
GTTTACTATGGCTTGGTCAATAATGTATCTGACGAGCAATCCAAGTTGGGAACAAAGTATTCAGTTCCACAGATTGCATTTTATAAAGCCATTGTTGAAGCAATTGCGCA
AGATCCATCTGCTCAAGGTGGAATATCCAACATTTCTGCTCTTAATCTGCAGTTGGAAAATCAGCTGGGGGATCCAGGGTCCCGGTCCCAAGTCACACCACCTGCTTTCA
AGAATTTCTCGATATCTCTCAAGGAAAAAACAATTTCCGAGCTTGCGCAGGATAAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCGTTTCTT
GATTTGCGAAGTTGGTTCCGCAGTAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGTGTGAAGGCAGAGTTGTGTAATAGTGAAGGTTGCACTGTCCGTGTACA
TCGGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCCTGCCCAGGTTGTGGCACTCGTTGGCGATCTACAACATCCAATATGGAGTCCAGGGAGGAAG
AGAACGAGCCAGATACGCGCAATCAAGATCAACCATCATCAAATAGGAGGAAGAAATCCAGGTTGAGCATAGATATTGATTTAGAACCAAATGAAGACAGTACGGCAGAA
GCTTCCCAACCTCCTCCAGATTCAAGGAGGGCAACGCGAAGTTCTACACGGCAGTGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKFNHCHWARVYREGGGGISRVLNSYFLRETSLPGFTMPELSWRHHTLIQALLARGPLREDHFHSVFTRITGNTPDNDQQLFNSYLLTINKALSFAQFELRGCRNQYDGR
VYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNISALNLQLENQLGDPGSRSQVTPPAFKNFSISLKEKTISELAQDKWLNCTPDGFVNLGVRSFL
DLRSWFRSNDVPSCEVCNEAGVKAELCNSEGCTVRVHRYCLKKMLSNKKSKRACPGCGTRWRSTTSNMESREEENEPDTRNQDQPSSNRRKKSRLSIDIDLEPNEDSTAE
ASQPPPDSRRATRSSTRQW

ClCG02G024200 (gene) of Watermelon (Charleston Gray) v2.5 genome