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ClCG03G001090 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG03G001090
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionmitochondrial import inner membrane translocase subunit TIM10-like
Genome locationCG_Chr03:1076740..1080303
RNA-Seq ExpressionClCG03G001090
SyntenyClCG03G001090
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583395.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4283.33Show/hide
Query:  PSKPRA---SVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQL
        P KP+    +  K+ L V  K+SMASPNDM SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQL
Subjt:  PSKPRA---SVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQL

Query:  LGSGRPPM
        LGSGRPPM
Subjt:  LGSGRPPM

KAG6607285.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4379.17Show/hide
Query:  GVLPPLSTTDQISSNPSKPRASVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVS
        GVLPP   TD I     K       FAL    KVSMASP   P+AVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVS
Subjt:  GVLPPLSTTDQISSNPSKPRASVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVS

Query:  KYWHVTNLIGQLLGSGRPPM
        KYWHVTNLIGQLLGSGRPPM
Subjt:  KYWHVTNLIGQLLGSGRPPM

KAG7036963.1 Mitochondrial import inner membrane translocase subunit TIM10, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-4378.33Show/hide
Query:  GVLPPLSTTDQISSNPSKPRASVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVS
        G LPP   TD I     K       FAL    KVSMASP   P+AVDKEQIFGMAEKEMEYRVELFNKLT SCFNKCVDKRYKESELNMGENSCIDRCVS
Subjt:  GVLPPLSTTDQISSNPSKPRASVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVS

Query:  KYWHVTNLIGQLLGSGRPPM
        KYWHVTNLIGQLLGSGRPPM
Subjt:  KYWHVTNLIGQLLGSGRPPM

XP_004145269.1 mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus]2.3e-4198.82Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

XP_022970585.1 mitochondrial import inner membrane translocase subunit TIM10-like [Cucurbita maxima]1.8e-4197.65Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPNDMPSA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

TrEMBL top hitse value%identityAlignment
A0A0A0LVG1 zf-Tim10_DDP domain-containing protein1.1e-4198.82Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A1S3C655 mitochondrial import inner membrane translocase subunit TIM101.1e-4198.82Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A5D3BDG9 Mitochondrial import inner membrane translocase subunit TIM10-like1.1e-4198.82Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPN+MPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A6J1HM98 mitochondrial import inner membrane translocase subunit TIM10-like7.3e-4196.47Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPNDM SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

A0A6J1I395 mitochondrial import inner membrane translocase subunit TIM10-like8.7e-4297.65Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASPNDMPSA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNL+GQLLGSGRPPM
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

SwissProt top hitse value%identityAlignment
P87108 Mitochondrial import inner membrane translocase subunit TIM103.8e-1039.39Show/hide
Query:  VDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        +  +Q    AE E++   ++FNKL  +C+ KC++  Y E ELN  E+SC+DRCV+KY+     +G+
Subjt:  VDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q759W7 Mitochondrial import inner membrane translocase subunit TIM106.4e-1037.88Show/hide
Query:  VDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        +  +Q    AE E++   ++FNKL  +C  KC+D  Y E +LN  E++C+DRCV+KY+     +G+
Subjt:  VDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q9UTE9 Mitochondrial import inner membrane translocase subunit tim104.9e-1043.55Show/hide
Query:  QIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        Q   MAE+E+E   ++FN+L  +C  KC+  +Y E++L  GE+ CIDRCVSKY+     + Q
Subjt:  QIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Q9W2D6 Mitochondrial import inner membrane translocase subunit Tim109.9e-1144.29Show/hide
Query:  SAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL
        S  D+ ++  M E E+E   +L+N++T +C  KC+  RY ESEL  GE  CIDRCV+KY  +   IG+ L
Subjt:  SAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLL

Q9ZW33 Mitochondrial import inner membrane translocase subunit TIM102.3e-3174.12Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  +P  V KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

Arabidopsis top hitse value%identityAlignment
AT2G29530.1 Tim10/DDP family zinc finger protein1.6e-3274.12Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  +P  V KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

AT2G29530.2 Tim10/DDP family zinc finger protein1.6e-3274.12Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM
        MASP  +P  V KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQLL +G+PP+
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQLLGSGRPPM

AT2G29530.3 Tim10/DDP family zinc finger protein7.0e-2856.88Show/hide
Query:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNK------------------------LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ
        MASP  +P  V KEQ F MA+ EMEYRVELFN                         L Q+CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  ++GQ
Subjt:  MASPNDMPSAVDKEQIFGMAEKEMEYRVELFNK------------------------LTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLIGQ

Query:  LLGSGRPPM
        LL +G+PP+
Subjt:  LLGSGRPPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACATATCGGGGTTTTGCCTCCTCTATCAACTACTGATCAGATTTCATCGAACCCATCAAAACCCAGAGCTTCAGTCTTGAAATTTGCATTGGCTGTTAGTTTGAA
AGTGTCAATGGCTTCCCCGAACGATATGCCATCGGCTGTGGATAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTA
CACAATCATGTTTCAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTCAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTTTCCAAGTATTGGCATGTAACC
AATTTAATCGGCCAGCTACTCGGGTCTGGTAGACCTCCAATGGAAGCAACACTATACTCATCCGAGGAAGAAGACGAGGCGGGGGCTGTGGTTAAATGCATGAGAGGAGA
GGAAGAAGCGCGAGAGGTTGTGTACAAAGGGAGGGAGAGGAGAGGAAGAAGAGCGAGAGGTTGTGTACAAAGGGAGGGAGAGGAGAGGGAACGAAAAACTAATAGGAAAA
GATATATATATTCATCAAAAGAGCTAAAAGAACCACCTCAAATTGGCACTGTGTTGAGGATCAGTTTCGGGGCGGGCAAGGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATACATATCGGGGTTTTGCCTCCTCTATCAACTACTGATCAGATTTCATCGAACCCATCAAAACCCAGAGCTTCAGTCTTGAAATTTGCATTGGCTGTTAGTTTGAA
AGTGTCAATGGCTTCCCCGAACGATATGCCATCGGCTGTGGATAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTA
CACAATCATGTTTCAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTCAATATGGGTGAAAATAGTTGTATTGACCGCTGCGTTTCCAAGTATTGGCATGTAACC
AATTTAATCGGCCAGCTACTCGGGTCTGGTAGACCTCCAATGGAAGCAACACTATACTCATCCGAGGAAGAAGACGAGGCGGGGGCTGTGGTTAAATGCATGAGAGGAGA
GGAAGAAGCGCGAGAGGTTGTGTACAAAGGGAGGGAGAGGAGAGGAAGAAGAGCGAGAGGTTGTGTACAAAGGGAGGGAGAGGAGAGGGAACGAAAAACTAATAGGAAAA
GATATATATATTCATCAAAAGAGCTAAAAGAACCACCTCAAATTGGCACTGTGTTGAGGATCAGTTTCGGGGCGGGCAAGGGGTAG
Protein sequenceShow/hide protein sequence
MIHIGVLPPLSTTDQISSNPSKPRASVLKFALAVSLKVSMASPNDMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVT
NLIGQLLGSGRPPMEATLYSSEEEDEAGAVVKCMRGEEEAREVVYKGRERRGRRARGCVQREGEERERKTNRKRYIYSSKELKEPPQIGTVLRISFGAGKG