; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG03G013000 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG03G013000
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRNA-binding family protein
Genome locationCG_Chr03:26794646..26804526
RNA-Seq ExpressionClCG03G013000
SyntenyClCG03G013000
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]2.9e-8155.65Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]4.2e-8055.65Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+A
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]3.2e-8054.78Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]3.5e-7954.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAG PKKTKGRGFR ESDRNTRL GSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]2.6e-8256.23Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein1.4e-8155.65Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B1.4e-8155.65Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL+G PKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A2.0e-8055.65Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+A
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like1.5e-8054.78Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG PKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like1.7e-7954.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSLAG PKKTKGRGFR ESDRNTRL GSDFDSLKSADGPGPQR          
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVE

Query:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL
                                                                                                            
Subjt:  TNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDL

Query:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA
                                              +IEGWIILVTGVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKA
Subjt:  GLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKA

Query:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        ISAMDG+ELLTQIINVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  ISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A3.1e-4638.81Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG--APKKTKGRGFRDE-SDRNTRLAG----SDFDSLKSADGPGPQRCWF
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G    +KTKGRGFRD+ + R++RLAG    SDFDSL S  GPGP R   
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAG--APKKTKGRGFRDE-SDRNTRLAG----SDFDSLKSADGPGPQRCWF

Query:  SPPSIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDN
                                                                                                            
Subjt:  SPPSIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDN

Query:  NNHVGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYES
                                                     +IEGWI+LVTGVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE+
Subjt:  NNHVGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYES

Query:  FEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRS-PRRRY
        FEEA+ AI A+DG ELLTQII+VDWAFS+GP++R+N R    RRSRS PRRRY
Subjt:  FEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRSRS-PRRRY

F4I9J7 RNA-binding protein Y144.1e-4639.27Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRCWFSPP
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQR      
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRCWFSPP

Query:  SIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNH
                                                                                                            
Subjt:  SIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNH

Query:  VGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEE
                                                  ++EGWIILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EE
Subjt:  VGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEE

Query:  AEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSRSPRRRY
        A+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSRSPRRRY
Subjt:  AEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSRSPRRRY

Q28BZ1 RNA-binding protein 8A4.1e-3060.38Show/hide
Query:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS
        ++EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+  ++G +L+ Q I+VDW F  GP   K  R +  RRS
Subjt:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS

Query:  RSPRRR
        RSP RR
Subjt:  RSPRRR

Q6ATR0 RNA-binding protein Y14B2.0e-3262.26Show/hide
Query:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS
        +IEGWI+LV+GV E+A+EDDL N F +FG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS GPI++  +     RRS
Subjt:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS

Query:  RSPRRR
        R+P RR
Subjt:  RSPRRR

Q9DF42 RNA-binding protein 8A-A5.4e-3059.43Show/hide
Query:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS
        ++EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+  ++G +L+ Q ++VDW F  GP   K  R +  RRS
Subjt:  AIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTRPARERRS

Query:  RSPRRR
        RSP RR
Subjt:  RSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-4739.27Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRCWFSPP
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFR+E  SDR  RL+  DF+SL S   PGPQR      
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDE--SDRNTRLAGSDFDSLKSADGPGPQRCWFSPP

Query:  SIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNH
                                                                                                            
Subjt:  SIVETNELRVISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNH

Query:  VGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEE
                                                  ++EGWIILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EE
Subjt:  VGDLGLRSGLFDREMDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEE

Query:  AEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSRSPRRRY
        A+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSRSPRRRY
Subjt:  AEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNTRPARERRSRSPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G13.5e-0830.67Show/hide
Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA
        + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      I+ V+WA
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA

AT3G11400.2 eukaryotic translation initiation factor 3G13.5e-0830.67Show/hide
Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA
        + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      I+ V+WA
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA

AT5G61030.1 glycine-rich RNA-binding protein 32.7e-0833.33Show/hide
Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA
        + + G+     ED L+ AF ++GE+ +  + LDR TG  +G+  + + S E A  AI A+DG +L  +++ V++A
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWA

AT5G64200.1 ortholog of human splicing factor SC351.0e-0732.71Show/hide
Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR--------PARER
        +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++         +R  
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNTR--------PARER

Query:  RSRSPRR
        RSRSPRR
Subjt:  RSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCTGATGTAGAGGCTGTCGACTTCGAGCCCGAGGAAGATGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGCCTCCCCACGAGCTCCATTT
CCCAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTCGCTTGCTGGTGCTCCTAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACC
CGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGATGGCCCTGGCCCCCAACGATGTTGGTTTTCCCCCCCTTCAATTGTCGAAACTAATGAGTTGAGA
GTTATTTCTAGCATTTATGGTGTCAAACCTAAGGCTTGGATGATTGACGACTTCAGAAAGAAAAAAAGGCAACAACTATGGGTGGATATTGCACGAAATGACCCC
TTATTTGCCCGTTTTGAGAAATTCATGGCTGGTTGTGGTAAGAGCATTTGCTTTAGGCATGATGTTTGGGTTGACCCATCCCCTTTGAAAGACTGCTTTCTTGAT
ATGTATGCTTTCTCTTTTAAAAAGGAGACCACTGTATTTGATTGCTGGGACAACAATAACCATGTGGGAGACCTTGGTCTTAGAAGTGGGCTCTTTGATCGTGAG
ATGGATGGCTGGGCATGCTTGGTGGAAAAGCTTAACTCCATTCAACTGGGATGGTGTGGATCAAGATCTTTGTTACTTTGTATAGCTATTGAAGGATGGATCATT
CTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCTCCAAAATGCCTTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGTCGTACT
GGGTTTGTCAAGGGATATGCATTGATTGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCCGCCATGGATGGGGCTGAACTTTTGACCCAAATTATCAAT
GTTGATTGGGCATTCAGCCATGGACCTATCAGAAGGAAGAACACAAGGCCTGCTCGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAAAGAAAAAGAAAAATCTAAAAGATTGGGTTAGCGGCCGAACAAGAAACCCTTGTTTTGATCCCCAAAACCCCCAGCCTTCCCCATCTTCTTTCTT
CCCTTCCATTTTCCCTTGCCATTTTGAAGAACCCACGAGGAGCTCTGAGAGACGTTGCTTAGCCATGGCGAGCGCTGATGTAGAGGCTGTCGACTTCGAGCCCGA
GGAAGATGACCTCATGGACGAGGATGGAGCTGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCCAAGCTCAAATCCGCCATTACCGGCGGCGCATCTTCCTC
GCTTGCTGGTGCTCCTAAGAAGACCAAGGGTCGTGGATTTCGAGACGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGA
TGGCCCTGGCCCCCAACGATGTTGGTTTTCCCCCCCTTCAATTGTCGAAACTAATGAGTTGAGAGTTATTTCTAGCATTTATGGTGTCAAACCTAAGGCTTGGAT
GATTGACGACTTCAGAAAGAAAAAAAGGCAACAACTATGGGTGGATATTGCACGAAATGACCCCTTATTTGCCCGTTTTGAGAAATTCATGGCTGGTTGTGGTAA
GAGCATTTGCTTTAGGCATGATGTTTGGGTTGACCCATCCCCTTTGAAAGACTGCTTTCTTGATATGTATGCTTTCTCTTTTAAAAAGGAGACCACTGTATTTGA
TTGCTGGGACAACAATAACCATGTGGGAGACCTTGGTCTTAGAAGTGGGCTCTTTGATCGTGAGATGGATGGCTGGGCATGCTTGGTGGAAAAGCTTAACTCCAT
TCAACTGGGATGGTGTGGATCAAGATCTTTGTTACTTTGTATAGCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCT
CCAAAATGCCTTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTCGATCGTCGTACTGGGTTTGTCAAGGGATATGCATTGATTGAATACGAGAGCTT
TGAGGAAGCAGAGAAAGCAATATCCGCCATGGATGGGGCTGAACTTTTGACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCTATCAGAAGGAAGAA
CACAAGGCCTGCTCGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGATTTTGAGGTGTAAAACTCCATGTGTGGTGTTATGGATTTTAATTGGAAAGGTG
TTTTTCTTGTGGATTGGATTAGGAGAGATGTTTCTACTGAGCTCTACTCAATTGTCTCAAGATTCCCCTGGCTTCCAGCCTTTGTTTCTCGGTCGTTGATGTGGA
TTGATGAATTGTATGTAACTTAGAGGATTTGAGGTTCATGTTTTTCTTTTTTCTTCTTTTTTGGATTACTTGAGGTTTATATTCCTTTTTGTGTTGAATATCTGG
TATTATATATATTTTTTTGTTCCAAATTTGGC
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLAGAPKKTKGRGFRDESDRNTRLAGSDFDSLKSADGPGPQRCWFSPPSIVETNELR
VISSIYGVKPKAWMIDDFRKKKRQQLWVDIARNDPLFARFEKFMAGCGKSICFRHDVWVDPSPLKDCFLDMYAFSFKKETTVFDCWDNNNHVGDLGLRSGLFDRE
MDGWACLVEKLNSIQLGWCGSRSLLLCIAIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIIN
VDWAFSHGPIRRKNTRPARERRSRSPRRRY