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ClCG03G014130 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG03G014130
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationCG_Chr03:29022578..29023283
RNA-Seq ExpressionClCG03G014130
SyntenyClCG03G014130
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]5.3e-0660.98Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   +LNQ+  +KLDR N+LLW+ +ALPIL+ +KLEGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

KAA0060627.1 Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]5.3e-0660.98Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   LLNQ++ +KLDR N+LLW+ +ALPI++S+K EGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

KAA0066132.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]8.2e-0765.85Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   +LNQ+T IKLDR+N+LLW+ +ALPIL+ +KLEGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]8.2e-0769.77Show/hide
Query:  SLPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        S P   LLNQ+T IK+DR NFLLWQN+ALPILRS+KL  +LTG
Subjt:  SLPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

XP_022842004.1 uncharacterized protein LOC111365701 [Olea europaea var. sylvestris]3.1e-0649.12Show/hide
Query:  LPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTGSPISTRDLISYMIAG
        LPF   L Q+  +KLD+NNFLLW+N+ LPI+R H LEGH+ G+ +   + IS    G
Subjt:  LPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTGSPISTRDLISYMIAG

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein2.6e-0660.98Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   +LNQ+  +KLDR N+LLW+ +ALPIL+ +KLEGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

A0A5A7V1E0 Reverse transcriptase, RNA-dependent DNA polymerase2.6e-0660.98Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   LLNQ++ +KLDR N+LLW+ +ALPI++S+K EGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

A0A5A7VCS1 Putative leucine-rich repeat receptor-like protein kinase4.0e-0765.85Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   +LNQ+T IKLDR+N+LLW+ +ALPIL+ +KLEGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

A0A5D3BVJ1 Uncharacterized protein2.6e-0660.98Show/hide
Query:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        P   LLNQ++ +KLDR N+LLW+ +ALPI++S+K EGHLTG
Subjt:  PFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

A0A6J1DCW4 uncharacterized protein LOC1110195984.0e-0769.77Show/hide
Query:  SLPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG
        S P   LLNQ+T IK+DR NFLLWQN+ALPILRS+KL  +LTG
Subjt:  SLPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACCCCACCAATAATCCGTTGAATGTTTCCTTTGCTGCTTTTGAACCAACCAATCCGAACATCCACGTTGCCAAAAACCCTACTGATTCTGCCTATGTGAAGAA
AAATCCTGATGTGTATGAAGTTAGATCAGGAGCATGCCCAGTCGGCTCCCTACCGTTCACTAACTTACTGAACCAAGTAACTTTGATCAAGCTGGATCGAAACAACTTCC
TGTTGTGGCAAAACATTGCGCTTCCTATACTTCGTAGCCACAAACTTGAAGGCCACCTCACAGGCTCTCCGATTAGCACAAGAGATCTAATTTCGTACATGATTGCAGGG
CTTGATGAGTACACTCCCATTGTAGTTGTTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAACCCCACCAATAATCCGTTGAATGTTTCCTTTGCTGCTTTTGAACCAACCAATCCGAACATCCACGTTGCCAAAAACCCTACTGATTCTGCCTATGTGAAGAA
AAATCCTGATGTGTATGAAGTTAGATCAGGAGCATGCCCAGTCGGCTCCCTACCGTTCACTAACTTACTGAACCAAGTAACTTTGATCAAGCTGGATCGAAACAACTTCC
TGTTGTGGCAAAACATTGCGCTTCCTATACTTCGTAGCCACAAACTTGAAGGCCACCTCACAGGCTCTCCGATTAGCACAAGAGATCTAATTTCGTACATGATTGCAGGG
CTTGATGAGTACACTCCCATTGTAGTTGTTTTATAG
Protein sequenceShow/hide protein sequence
MANPTNNPLNVSFAAFEPTNPNIHVAKNPTDSAYVKKNPDVYEVRSGACPVGSLPFTNLLNQVTLIKLDRNNFLLWQNIALPILRSHKLEGHLTGSPISTRDLISYMIAG
LDEYTPIVVVL