; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G000125 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G000125
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionReverse transcriptase
Genome locationCG_Chr04:366797..369481
RNA-Seq ExpressionClCG04G000125
SyntenyClCG04G000125
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]8.7e-11962.39Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQ AF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]8.7e-11962.39Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQ AF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]3.0e-11962.68Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQAAF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]3.0e-11963.61Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++TGPLT LLKK+ +W W  EC AAFE LKK  MEG VLGIADVT+PFEVETDASDFALG VLLQD HPIAYE++KLNDA
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRYA SEKEMLAVVHCLRAWRQYLLG+KFV+K DNSS+CHFF Q KLSSKQARWQ+                        RKSE AALC+ A LKAS L
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
        +G++REAIR +L ND AAQA+IQL+ EG TR+                      LR+LL+ ECHDT WAGH GWQRTYALLK+GY WPSLRDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSNRYQ
        CL+CQQDK E  K+A LLEPL +PSR W+S   +       +G +  YQ
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSNRYQ

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]3.5e-12061.52Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFSR+  PLT+LLKKDH W W ++CQ AFE+LK     GPVLG+ DVTKPFEVETDASDFALG VL+Q+ HPIAYE+RKLNDA
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLR WRQYLLGS+FV+K DNS+ CHFF Q KL++KQARWQ+                        RK EHAALC+ A + +S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTR----------------------ELRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G++R+ I+ HL  D +A+A+++L++ GKTR                      ELR+ L++ECHDT WAGH GWQRTYAL+K+GY WP++RDDIM +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTR----------------------ELRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E AK++GLLEPL VP+RPW+SVS+DFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

TrEMBL top hitse value%identityAlignment
A0A5A7UXR6 Reverse transcriptase4.2e-11962.39Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQ AF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

A0A5D3BRZ6 Reverse transcriptase4.2e-11962.39Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQ AF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

A0A5D3C4R1 Reverse transcriptase4.2e-11962.39Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQ AF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

A0A5D3C9P8 Reverse transcriptase1.4e-11962.68Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++  PLT+LLKKD  W W  ECQAAF+ LK+  MEGP+LGIADVTKPFEVETDASD+ALG VLLQ+ HPIAYE+RKLN A
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRY  SEKEMLAVVHCLRAWRQYLLGS FV+K DNS+ CHFF Q KL+SKQARWQ+                        RK EHAA+CL A L+ S +
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
         G+VR+ +R  L  D AAQ ++ L++ GKTR+                      LR+ L+ ECHDT WAGH GWQRTYALLK+GY WP++RDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG
        CL+CQQDK E  K+AGLL+PL VP+RPW+SVSMDFITHLPKVG
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVG

A0A6J1DLQ6 uncharacterized protein LOC1110223201.4e-11963.61Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA
        +LRSFLGLANYYRRFVEGFS++TGPLT LLKK+ +W W  EC AAFE LKK  MEG VLGIADVT+PFEVETDASDFALG VLLQD HPIAYE++KLNDA
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDA

Query:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL
        ERRYA SEKEMLAVVHCLRAWRQYLLG+KFV+K DNSS+CHFF Q KLSSKQARWQ+                        RKSE AALC+ A LKAS L
Subjt:  ERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSICHFFAQRKLSSKQARWQD------------------------RKSEHAALCLFAQLKASSL

Query:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT
        +G++REAIR +L ND AAQA+IQL+ EG TR+                      LR+LL+ ECHDT WAGH GWQRTYALLK+GY WPSLRDD+M +TKT
Subjt:  SGTVREAIRTHLVNDTAAQALIQLSEEGKTRE----------------------LRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIMPFTKT

Query:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSNRYQ
        CL+CQQDK E  K+A LLEPL +PSR W+S   +       +G +  YQ
Subjt:  CLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSNRYQ

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.7e-3528.88Show/hide
Query:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN
        ++LR FLG  NY R+F+   S+ T PL  LLKKD +W W      A E++K+  +  PVL   D +K   +ETDASD A+G+VL Q   DD  +P+ Y +
Subjt:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN

Query:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------
         K++ A+  Y+ S+KEMLA++  L+ WR YL  +   F I  D+ ++           + + ARWQ                                  
Subjt:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------

Query:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA
         + SE  ++    Q+   S++   +  + T   NDT    L+  +E+ +  E                       L R ++K+ H+     H G +    
Subjt:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA

Query:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN
        ++ + + W  +R  I  + + C  CQ +KS + K  G L+P+    RPW+S+SMDFIT LP+    N
Subjt:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN

P0CT35 Transposon Tf2-2 polyprotein4.7e-3528.88Show/hide
Query:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN
        ++LR FLG  NY R+F+   S+ T PL  LLKKD +W W      A E++K+  +  PVL   D +K   +ETDASD A+G+VL Q   DD  +P+ Y +
Subjt:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN

Query:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------
         K++ A+  Y+ S+KEMLA++  L+ WR YL  +   F I  D+ ++           + + ARWQ                                  
Subjt:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------

Query:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA
         + SE  ++    Q+   S++   +  + T   NDT    L+  +E+ +  E                       L R ++K+ H+     H G +    
Subjt:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA

Query:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN
        ++ + + W  +R  I  + + C  CQ +KS + K  G L+P+    RPW+S+SMDFIT LP+    N
Subjt:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN

P0CT36 Transposon Tf2-3 polyprotein4.7e-3528.88Show/hide
Query:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN
        ++LR FLG  NY R+F+   S+ T PL  LLKKD +W W      A E++K+  +  PVL   D +K   +ETDASD A+G+VL Q   DD  +P+ Y +
Subjt:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN

Query:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------
         K++ A+  Y+ S+KEMLA++  L+ WR YL  +   F I  D+ ++           + + ARWQ                                  
Subjt:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------

Query:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA
         + SE  ++    Q+   S++   +  + T   NDT    L+  +E+ +  E                       L R ++K+ H+     H G +    
Subjt:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA

Query:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN
        ++ + + W  +R  I  + + C  CQ +KS + K  G L+P+    RPW+S+SMDFIT LP+    N
Subjt:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN

P0CT41 Transposon Tf2-12 polyprotein4.7e-3528.88Show/hide
Query:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN
        ++LR FLG  NY R+F+   S+ T PL  LLKKD +W W      A E++K+  +  PVL   D +K   +ETDASD A+G+VL Q   DD  +P+ Y +
Subjt:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN

Query:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------
         K++ A+  Y+ S+KEMLA++  L+ WR YL  +   F I  D+ ++           + + ARWQ                                  
Subjt:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------

Query:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA
         + SE  ++    Q+   S++   +  + T   NDT    L+  +E+ +  E                       L R ++K+ H+     H G +    
Subjt:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA

Query:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN
        ++ + + W  +R  I  + + C  CQ +KS + K  G L+P+    RPW+S+SMDFIT LP+    N
Subjt:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN

Q9UR07 Transposon Tf2-11 polyprotein4.7e-3528.88Show/hide
Query:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN
        ++LR FLG  NY R+F+   S+ T PL  LLKKD +W W      A E++K+  +  PVL   D +K   +ETDASD A+G+VL Q   DD  +P+ Y +
Subjt:  EKLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQ---DD--HPIAYEN

Query:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------
         K++ A+  Y+ S+KEMLA++  L+ WR YL  +   F I  D+ ++           + + ARWQ                                  
Subjt:  RKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGS--KFVIKIDNSSICHFFAQRK--LSSKQARWQ----------------------------------

Query:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA
         + SE  ++    Q+   S++   +  + T   NDT    L+  +E+ +  E                       L R ++K+ H+     H G +    
Subjt:  DRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRE-----------------------LRRLLMKECHDTPWAGHNGWQRTYA

Query:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN
        ++ + + W  +R  I  + + C  CQ +KS + K  G L+P+    RPW+S+SMDFIT LP+    N
Subjt:  LLKQGYCWPSLRDDIMPFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSN

Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers9.9e-0432.84Show/hide
Query:  WSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLGFIGWIRMLFDEHPFKASK
        W    PS C LC    ++++H+FF+C F+ ++W+  F      V PP  F    R L   HP +  K
Subjt:  WSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLGFIGWIRMLFDEHPFKASK

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.8e-0527.17Show/hide
Query:  QKQCPWSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLG-FIGWIRMLFDEHPFKASKQFLWEKLRSFLGLANYYRR
        Q+   W  I    CCLC  +++S+ H+ F+C+FA  +W   FS     + P    F  W  +L       +S   L  K+ +   + N +R+
Subjt:  QKQCPWSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLG-FIGWIRMLFDEHPFKASKQFLWEKLRSFLGLANYYRR

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.3e-0538.6Show/hide
Query:  WSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLGFIGWIRML
        W  I P  C  C    ++++H+FF+C+FA ++W    S    HV PPL F   IR L
Subjt:  WSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLGFIGWIRML

ATMG00860.1 DNA/RNA polymerases superfamily protein2.3e-0844.12Show/hide
Query:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPF
        +LR FLGL  YYRRFV+ + +   PLT+LLKK +   W      AF+ LK      PVL + D+  PF
Subjt:  KLRSFLGLANYYRRFVEGFSRKTGPLTKLLKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAAACTTCAGAAACAGTGTCCATGGTCCTCTATTTCTCCCTCGTGGTGCTGTCTTTGCAGAGAAGATAGTGATTCACAAAAGCATATTTTCTTCAATTGTCAGTT
TGCTGTTGATATCTGGGCTGCTCTGTTTTCTGCTTTTGGTTGGCATGTTGCCCCTCCTTTAGGCTTCATTGGTTGGATCAGAATGCTGTTCGATGAGCACCCCTTCAAGG
CATCTAAACAATTTCTATGGGAGAAACTGCGCTCCTTCCTCGGACTAGCCAACTACTATAGGCGGTTCGTGGAGGGATTCTCGAGGAAAACAGGACCGTTGACTAAGTTG
TTGAAGAAAGATCACCAGTGGGGTTGGATCTCAGAGTGTCAGGCTGCCTTCGAAGACTTGAAGAAGGTCACGATGGAGGGGCCAGTTCTCGGAATTGCAGATGTAACAAA
GCCTTTCGAAGTCGAAACTGATGCGTCCGACTTCGCCTTAGGCAGCGTTCTCCTTCAAGACGACCATCCCATTGCTTATGAGAATCGAAAACTAAACGATGCTGAAAGGA
GATATGCAACATCTGAGAAAGAAATGTTGGCCGTTGTTCACTGTTTACGAGCCTGGAGACAATATCTGTTAGGCTCCAAGTTCGTAATCAAGATTGACAACAGCTCGATC
TGCCACTTTTTCGCACAGCGAAAGTTGTCGTCCAAGCAAGCCCGATGGCAAGACCGGAAAAGCGAACATGCAGCCCTGTGCTTGTTCGCCCAGTTAAAAGCCAGTAGTCT
GAGTGGGACAGTCCGAGAAGCCATAAGAACCCACTTGGTCAACGACACAGCTGCCCAAGCCTTGATTCAACTGTCCGAAGAGGGGAAGACTCGGGAGCTTCGAAGATTGT
TAATGAAAGAGTGTCACGATACGCCATGGGCTGGACACAATGGGTGGCAAAGAACCTATGCGCTGTTGAAACAAGGCTACTGTTGGCCAAGTCTCCGGGATGATATCATG
CCGTTCACTAAGACTTGTCTTGTTTGCCAACAAGACAAATCGGAAAGCGCAAAGTTAGCTGGTCTACTGGAACCCTTACTTGTACCCTCAAGACCATGGGATAGTGTGTC
TATGGATTTCATCACACATCTACCTAAAGTTGGGAGTTCAAATCGATACCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAAACTTCAGAAACAGTGTCCATGGTCCTCTATTTCTCCCTCGTGGTGCTGTCTTTGCAGAGAAGATAGTGATTCACAAAAGCATATTTTCTTCAATTGTCAGTT
TGCTGTTGATATCTGGGCTGCTCTGTTTTCTGCTTTTGGTTGGCATGTTGCCCCTCCTTTAGGCTTCATTGGTTGGATCAGAATGCTGTTCGATGAGCACCCCTTCAAGG
CATCTAAACAATTTCTATGGGAGAAACTGCGCTCCTTCCTCGGACTAGCCAACTACTATAGGCGGTTCGTGGAGGGATTCTCGAGGAAAACAGGACCGTTGACTAAGTTG
TTGAAGAAAGATCACCAGTGGGGTTGGATCTCAGAGTGTCAGGCTGCCTTCGAAGACTTGAAGAAGGTCACGATGGAGGGGCCAGTTCTCGGAATTGCAGATGTAACAAA
GCCTTTCGAAGTCGAAACTGATGCGTCCGACTTCGCCTTAGGCAGCGTTCTCCTTCAAGACGACCATCCCATTGCTTATGAGAATCGAAAACTAAACGATGCTGAAAGGA
GATATGCAACATCTGAGAAAGAAATGTTGGCCGTTGTTCACTGTTTACGAGCCTGGAGACAATATCTGTTAGGCTCCAAGTTCGTAATCAAGATTGACAACAGCTCGATC
TGCCACTTTTTCGCACAGCGAAAGTTGTCGTCCAAGCAAGCCCGATGGCAAGACCGGAAAAGCGAACATGCAGCCCTGTGCTTGTTCGCCCAGTTAAAAGCCAGTAGTCT
GAGTGGGACAGTCCGAGAAGCCATAAGAACCCACTTGGTCAACGACACAGCTGCCCAAGCCTTGATTCAACTGTCCGAAGAGGGGAAGACTCGGGAGCTTCGAAGATTGT
TAATGAAAGAGTGTCACGATACGCCATGGGCTGGACACAATGGGTGGCAAAGAACCTATGCGCTGTTGAAACAAGGCTACTGTTGGCCAAGTCTCCGGGATGATATCATG
CCGTTCACTAAGACTTGTCTTGTTTGCCAACAAGACAAATCGGAAAGCGCAAAGTTAGCTGGTCTACTGGAACCCTTACTTGTACCCTCAAGACCATGGGATAGTGTGTC
TATGGATTTCATCACACATCTACCTAAAGTTGGGAGTTCAAATCGATACCAGTGA
Protein sequenceShow/hide protein sequence
MDKLQKQCPWSSISPSWCCLCREDSDSQKHIFFNCQFAVDIWAALFSAFGWHVAPPLGFIGWIRMLFDEHPFKASKQFLWEKLRSFLGLANYYRRFVEGFSRKTGPLTKL
LKKDHQWGWISECQAAFEDLKKVTMEGPVLGIADVTKPFEVETDASDFALGSVLLQDDHPIAYENRKLNDAERRYATSEKEMLAVVHCLRAWRQYLLGSKFVIKIDNSSI
CHFFAQRKLSSKQARWQDRKSEHAALCLFAQLKASSLSGTVREAIRTHLVNDTAAQALIQLSEEGKTRELRRLLMKECHDTPWAGHNGWQRTYALLKQGYCWPSLRDDIM
PFTKTCLVCQQDKSESAKLAGLLEPLLVPSRPWDSVSMDFITHLPKVGSSNRYQ