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ClCG04G000180 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G000180
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:570226..583800
RNA-Seq ExpressionClCG04G000180
SyntenyClCG04G000180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649712.1 hypothetical protein Csa_012861, partial [Cucumis sativus]7.1e-1354.9Show/hide
Query:  LCFGFGTDHLIDPLGMQFRKVEAGVGALAPIPLTSKVVNP--------EIDDSGTSTIDSLKVGPV-ASKVAGAGTSTESSMILEVAMSVDGEDKARRKK
        LC G G DH I PLG+Q    +AG GALAPIPL SK++N         + DDSGTS IDSLK+  V +S+V G     +SSM L VAM +DGED A RKK
Subjt:  LCFGFGTDHLIDPLGMQFRKVEAGVGALAPIPLTSKVVNP--------EIDDSGTSTIDSLKVGPV-ASKVAGAGTSTESSMILEVAMSVDGEDKARRKK

Query:  NV
        NV
Subjt:  NV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTTGTTTTCATGTTGTGTTTGCGCATATAGTTGATTCCAACATATCATTGTGTTTTGGATTCGGAACAGACCATCTGATCGATCCTTTGGGCATGCAATTTAG
AAAGGTTGAGGCAGGGGTTGGTGCCCTTGCACCTATTCCACTAACATCAAAAGTAGTAAACCCGGAGATTGATGACTCAGGTACTTCGACAATAGATTCTCTAAAAGTAG
GACCTGTAGCTTCCAAAGTTGCTGGAGCAGGTACTAGTACTGAATCGAGCATGATTCTAGAAGTTGCCATGAGCGTGGATGGAGAAGACAAGGCAAGGAGAAAGAAGAAT
GTTGTGATAAATAAAGTCTTGAGTATTAAGAAGGTAGAACGGATCATCGGGGTTGATTCGGGGCTAAAACATGATTTCTCTTTATCTTGTAACCCCATAAGAAAGACTGC
TTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTTGTTTTCATGTTGTGTTTGCGCATATAGTTGATTCCAACATATCATTGTGTTTTGGATTCGGAACAGACCATCTGATCGATCCTTTGGGCATGCAATTTAG
AAAGGTTGAGGCAGGGGTTGGTGCCCTTGCACCTATTCCACTAACATCAAAAGTAGTAAACCCGGAGATTGATGACTCAGGTACTTCGACAATAGATTCTCTAAAAGTAG
GACCTGTAGCTTCCAAAGTTGCTGGAGCAGGTACTAGTACTGAATCGAGCATGATTCTAGAAGTTGCCATGAGCGTGGATGGAGAAGACAAGGCAAGGAGAAAGAAGAAT
GTTGTGATAAATAAAGTCTTGAGTATTAAGAAGGTAGAACGGATCATCGGGGTTGATTCGGGGCTAAAACATGATTTCTCTTTATCTTGTAACCCCATAAGAAAGACTGC
TTAA
Protein sequenceShow/hide protein sequence
MMFCFHVVFAHIVDSNISLCFGFGTDHLIDPLGMQFRKVEAGVGALAPIPLTSKVVNPEIDDSGTSTIDSLKVGPVASKVAGAGTSTESSMILEVAMSVDGEDKARRKKN
VVINKVLSIKKVERIIGVDSGLKHDFSLSCNPIRKTA