CuGenDBv2

Gene ID	ClCG04G000340
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein POLYCHOME
Genome location	CG_Chr04:1207633..1210763
RNA-Seq Expression	ClCG04G000340
Synteny	ClCG04G000340
Gene Ontology terms	GO:0051783 - regulation of nuclear division (biological process) GO:1904667 - negative regulation of ubiquitin protein ligase activity (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR034590 - POLYCHOME/GIGAS CELL1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595661.1 Ras-related protein RABA4d, partial [Cucurbita argyrosperma subsp. sororia]

2.3e-111

85.23

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Query:  LKPTGISRSIMSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLY
        +KPTGISRSIMSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG      PRR+FGSPISGGIGRNRFLY
Subjt:  LKPTGISRSIMSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLY

Query:  RSPVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKV
        RSPV +RENTAA SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV
Subjt:  RSPVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKV

Query:  PKIILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
         KI+ GIAN+NV  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  PKIILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

KGN53824.1 hypothetical protein Csa_015343 [Cucumis sativus]

1.0e-122

90.84

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Query:  NTPLKPTGISRSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRS
        NTP KPTGISRSIMSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+
Subjt:  NTPLKPTGISRSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRS

Query:  PVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPK
        PV +REN +A SSRR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPK
Subjt:  PVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+ GIAN+N VGAE LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_004150162.1 protein POLYCHOME [Cucumis sativus]

2.0e-115

90.76

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Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        E LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_008460799.1 PREDICTED: protein POLYCHOME [Cucumis melo]

1.2e-115

90.76

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Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

XP_038881398.1 protein POLYCHOME [Benincasa hispida]

4.7e-120

93.98

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Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIAR TTT TAQQRPTNPGPGGGG+N RR FGSPISGGIGRNRFLYRSPV NRENTAA SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEY+V VAGDHQEPSISLVTPKPTVGKV KI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY99 Uncharacterized protein

4.9e-123

90.84

Show/hide

Query:  NTPLKPTGISRSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRS
        NTP KPTGISRSIMSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT TAQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+
Subjt:  NTPLKPTGISRSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRS

Query:  PVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPK
        PV +REN +A SSRR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPK
Subjt:  PVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+ GIAN+N VGAE LTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A1S3CDA1 protein POLYCHOME

5.7e-116

90.76

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Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A5D3BM43 Protein POLYCHOME

5.7e-116

90.76

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Query:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS
        MSEARDRLERQVD+AEVFARRRSEGILDEQEM S+LIGTPIARATTT  AQQRPTNPGPGGGG+N RRTFGSPISGGIGRNRFLYR+PV +REN +A SS
Subjt:  MSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSS

Query:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA
        RR+RSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD+SPAPSDERALEYSVSVA DHQEP ISL+TPKPTVGKVPKI+ GIAN+N VGA
Subjt:  RRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQNVVGA

Query:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        ETLTPQKKLLNSIDKVEKVVMEELQKLK+TPSAKKAEREKRVRTLMSFR
Subjt:  ETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A6J1EBD1 protein POLYCHOME-like

1.9e-106

85.38

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Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN---PRRTFGSPISGGIGRNRFLYRSPVFNRENTA
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG     PRR+FGSPISGGIGRNRFLYRSPV +RENTA
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN---PRRTFGSPISGGIGRNRFLYRSPVFNRENTA

Query:  ASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQN
        A SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KI+ GIAN+N
Subjt:  ASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQN

Query:  VVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  VVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

A0A6J1HRM8 protein POLYCHOME

1.9e-106

85.04

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Query:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT
        MSE+RDRLERQVD+AEVFARRRSE GILDEQEM++ LIGTPIARATTT TAQQRPTN GPGGGG      PRR+FGSPISGGIGRNRFLYRSPV +RENT
Subjt:  MSEARDRLERQVDHAEVFARRRSE-GILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSN----PRRTFGSPISGGIGRNRFLYRSPVFNRENT

Query:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ
        AA SSRR+RSR R+SVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALE+S SV+G HQEP +SLVTPKPTVGKV KI+ GIAN+
Subjt:  AASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVGKVPKIILGIANQ

Query:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        NV  +E LTPQKKLLNSIDKVEKVV EELQKL+KTPSAK+AEREKRVRTLMSFR
Subjt:  NVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

SwissProt top hits

e value

%identity

Alignment

O48533 Protein POLYCHOME

6.2e-51

51.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+P+ R  +  T        G   G G   R  FG   +GG  R +  +RSP   REN +  
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+L I  +N    + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Q9M2R1 Protein GIGAS CELL1

1.2e-33

43.61

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Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS
        M EARDR ER VD++ +FA RR  GI LDE +    LI +P+            P     GG G   R  F +   G        +R P   REN    +
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS

Query:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K
        +RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG          K
Subjt:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K

Query:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V K++L I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Arabidopsis top hits

e value

%identity

Alignment

AT2G42260.1 uv-b-insensitive 4

4.4e-52

51.15

Show/hide

Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS
        M EARDR+ERQVD+   F  RRS GI LDE     +L G+P+ R  +  T        G   G G   R  FG   +GG  R +  +RSP   REN +  
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGP-GGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAAS

Query:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK
         +RR R+R  NSVLP WYPRTPLRDI+AVVRAIER RAR+   EG G D  +P P     L+  V ++G H E   S+VTP P++G          KV +
Subjt:  SSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSD-NSPAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------KVPK

Query:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        I+L I  +N    + LTP+KKLLNSIDKVEKVVMEE+QK+K TPSAK+AEREKRVRTLMS R
Subjt:  IILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

AT3G57860.1 UV-B-insensitive 4-like

8.4e-35

43.61

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Query:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS
        M EARDR ER VD++ +FA RR  GI LDE +    LI +P+            P     GG G   R  F +   G        +R P   REN    +
Subjt:  MSEARDRLERQVDHAEVFARRRSEGI-LDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGGGGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASS

Query:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K
        +RR R  G   +LP WYPRTPLRDIT +VRAIER     R   G G D+      P       LE  V ++G+H+    S+VTP P+VG          K
Subjt:  SRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNS-----PAPSDERALEYSVSVAGDHQEPSISLVTPKPTVG----------K

Query:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR
        V K++L I  +     A  +TP+KKLLNSIDKVEK+VM E+QKLK TP AK+ EREKRVRTLM+ R
Subjt:  VPKIILGIANQNV-VGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TTCTCTCAAAGCAGCTCCATCTTCTTCCCTCTCATTTTTCAACTGCGCCTCACACAAGAGACCGCCTCCCACCAATCCACCGCCATTTTTTTTGGTCAAAGGTTAAACAA
TACTCCATTGAAGCCCACTGGAATCTCACGTTCCATAATGTCGGAAGCAAGAGATAGATTGGAGAGGCAAGTGGATCATGCCGAGGTATTTGCTCGTCGGAGATCCGAAG
GTATATTGGACGAGCAAGAAATGAATTCTCATTTGATAGGTACTCCGATTGCACGCGCTACAACGACGCCTACTGCTCAACAAAGACCTACGAATCCCGGCCCTGGTGGA
GGTGGTTCGAATCCCAGACGCACTTTTGGTTCTCCCATTTCTGGTGGAATTGGACGTAATAGATTTCTTTACAGATCTCCAGTGTTTAACCGCGAGAATACGGCGGCTTC
GAGTTCCCGGCGGAATAGATCTCGGGGTAGAAACAGTGTGTTACCGATTTGGTACCCAAGAACCCCTCTCCGCGACATAACTGCAGTTGTGAGGGCAATTGAAAGGACAA
GAGCTCGCTTGAGAGAAAACGAAGGCCAAGGAAGTGACAATAGTCCTGCTCCCTCGGACGAAAGAGCTTTAGAGTATAGCGTGTCTGTGGCAGGTGATCATCAAGAGCCA
AGCATTTCTCTGGTCACCCCAAAACCAACCGTAGGTAAAGTTCCAAAGATAATTCTTGGAATCGCGAATCAGAATGTGGTAGGGGCCGAGACTCTCACTCCCCAGAAGAA
GCTCTTGAACTCCATAGACAAAGTGGAGAAAGTAGTAATGGAGGAATTGCAGAAATTGAAAAAAACTCCCAGTGCGAAGAAAGCAGAGAGGGAGAAAAGGGTTCGTACTT
TAATGTCGTTTCGTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

FSQSSSIFFPLIFQLRLTQETASHQSTAIFFGQRLNNTPLKPTGISRSIMSEARDRLERQVDHAEVFARRRSEGILDEQEMNSHLIGTPIARATTTPTAQQRPTNPGPGG
GGSNPRRTFGSPISGGIGRNRFLYRSPVFNRENTAASSSRRNRSRGRNSVLPIWYPRTPLRDITAVVRAIERTRARLRENEGQGSDNSPAPSDERALEYSVSVAGDHQEP
SISLVTPKPTVGKVPKIILGIANQNVVGAETLTPQKKLLNSIDKVEKVVMEELQKLKKTPSAKKAEREKRVRTLMSFR

ClCG04G000340 (gene) of Watermelon (Charleston Gray) v2.5 genome