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ClCG04G001060 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G001060
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein phosphatase 2C 29-like
Genome locationCG_Chr04:3307796..3308402
RNA-Seq ExpressionClCG04G001060
SyntenyClCG04G001060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596920.1 Protein phosphatase 2C 29, partial [Cucurbita argyrosperma subsp. sororia]8.6e-2262.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
XP_022937431.1 protein phosphatase 2C 29-like [Cucurbita moschata]1.5e-2162.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
XP_023005298.1 protein phosphatase 2C 29-like [Cucurbita maxima]1.5e-2162.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
XP_023007705.1 protein phosphatase 2C 29-like [Cucurbita maxima]3.3e-2161.62Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDGGGG    A G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
XP_023520895.1 protein phosphatase 2C 29-like [Cucurbita pepo subsp. pepo]1.5e-2162.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
TrEMBL top hitse value%identityAlignment
A0A5D3CJN1 Protein phosphatase 2C 296.7e-2060.61Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL AS GGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVD      A   G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
A0A6J1E5P7 protein phosphatase 2C 29-like2.7e-2161.62Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDGGGG  A   G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
A0A6J1FAB7 protein phosphatase 2C 29-like7.1e-2262.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
A0A6J1L1S8 protein phosphatase 2C 29-like7.1e-2262.63Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ VLML+  Y+DA  D AL A GGGCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDG G   A + G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
A0A6J1L3Q7 protein phosphatase 2C 29-like1.6e-2161.62Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
        NSSIP+ V M++  Y+DA  D AL A G GCGVRGSILNGFEST        +  P   +EPLERGGFFLSGPIER  LSG LD NVDGGGG    A G
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFEST-HVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLDVNVDGGGGVDADASG
SwissProt top hitse value%identityAlignment
O82302 Protein phosphatase 2C 295.8e-0543.53Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLD
        N+S  K VL L + Y+DA      + S  G GVR S++  NGFE T      F   P L+  P +R G F+SGPIER   SG LD
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLD
Arabidopsis top hitse value%identityAlignment
AT2G35350.1 poltergeist like 14.1e-0643.53Show/hide
Query:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLD
        N+S  K VL L + Y+DA      + S  G GVR S++  NGFE T      F   P L+  P +R G F+SGPIER   SG LD
Subjt:  NSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSIL--NGFESTHVLLFRFRWCPCLESEPLERGGFFLSGPIERRTLSGLLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAGCCACTTAAATCGCTTCAAAAACCTTTGGCTGTGATTCCGGCCAAGGTTTTGACGAACATTGTTATATGGGAAAAAACCAGAGCAGGTGATAAGAGAGGGAA
GAGAAGACAAAAGATTATAAAGGCAAAAAATAGTTCTATTCCCAAATTTGTCCTTATGCTCAATGAAGCTTACAACGATGCCATTGTTGACCCCGCGCTTAGTGCTTCTG
GTGGTGGTTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAAAGTACTCATGTACTGCTCTTCCGCTTCAGATGGTGCCCATGCCTAGAGTCTGAGCCTTTGGAGCGA
GGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTAGGACACTGTCTGGTCTGCTCGATGTTAATGTCGATGGTGGTGGCGGCGTCGATGCCGACGCCAGTGGTTTGAGAAG
AAGAATCGTCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGAGCCACTTAAATCGCTTCAAAAACCTTTGGCTGTGATTCCGGCCAAGGTTTTGACGAACATTGTTATATGGGAAAAAACCAGAGCAGGTGATAAGAGAGGGAA
GAGAAGACAAAAGATTATAAAGGCAAAAAATAGTTCTATTCCCAAATTTGTCCTTATGCTCAATGAAGCTTACAACGATGCCATTGTTGACCCCGCGCTTAGTGCTTCTG
GTGGTGGTTGTGGAGTCAGAGGGAGTATTTTGAATGGCTTTGAAAGTACTCATGTACTGCTCTTCCGCTTCAGATGGTGCCCATGCCTAGAGTCTGAGCCTTTGGAGCGA
GGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTAGGACACTGTCTGGTCTGCTCGATGTTAATGTCGATGGTGGTGGCGGCGTCGATGCCGACGCCAGTGGTTTGAGAAG
AAGAATCGTCCTTTAG
Protein sequenceShow/hide protein sequence
MIEPLKSLQKPLAVIPAKVLTNIVIWEKTRAGDKRGKRRQKIIKAKNSSIPKFVLMLNEAYNDAIVDPALSASGGGCGVRGSILNGFESTHVLLFRFRWCPCLESEPLER
GGFFLSGPIERRTLSGLLDVNVDGGGGVDADASGLRRRIVL