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ClCG04G001390 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G001390
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:4777402..4783242
RNA-Seq ExpressionClCG04G001390
SyntenyClCG04G001390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDP01558.1 unnamed protein product [Coffea canephora]2.0e-1375.86Show/hide
Query:  CHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA
        C S + YSES  IFGSAPSLRILAPTTVVD TSLLR+D+ GASAAAPPL+PFF  P A
Subjt:  CHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA

KAA0049778.1 uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa]6.4e-0442.68Show/hide
Query:  MEAMDQEVSKIRAEIQKLSGIEETLASLSKSIERLGVQAEK---QKIMLTTIFVDLARGQKLPAGEELGSRSGTSAFSLRGG
        ++ +DQ+ S IR E+ KLS IEE LAS++KSIERLG+QAEK   Q+++L  I   +     +  G E  S  G+   S+  G
Subjt:  MEAMDQEVSKIRAEIQKLSGIEETLASLSKSIERLGVQAEK---QKIMLTTIFVDLARGQKLPAGEELGSRSGTSAFSLRGG

KAF7819460.1 hypothetical protein G2W53_024915 [Senna tora]1.2e-1367.65Show/hide
Query:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA
        SL  GCLSSKCHSQ+ Y ES  IFGS  SLR+LAPT+VVD TSL+R++ALGAS   PPLD FF L  A
Subjt:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA

KAG5609106.1 hypothetical protein H5410_020387 [Solanum commersonii]3.1e-1469.01Show/hide
Query:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV
        SL  G LSS+CHS   YSES  I G APSLRI APTT V  TSLL +DA  ASAAAPPL PFFDL P ANV
Subjt:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV

TMW86711.1 hypothetical protein EJD97_020970 [Solanum chilense]1.6e-0757.75Show/hide
Query:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV
        SL  G LSS+C S + YSE   I G APSL + APT V   TSLL + A  ASAA  PL P+FDL PAANV
Subjt:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV

TrEMBL top hitse value%identityAlignment
A0A068U1S3 Uncharacterized protein9.6e-1475.86Show/hide
Query:  CHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA
        C S + YSES  IFGSAPSLRILAPTTVVD TSLLR+D+ GASAAAPPL+PFF  P A
Subjt:  CHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPA

A0A2P2J9M4 Uncharacterized protein MANES_15G1568003.3e-1466.67Show/hide
Query:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLP-PAANV
        SL  G LSS+CHSQ GYSES   FGSAPSLR+LAPTTVVD TSLL +    + AA PPL PFF LP PA N+
Subjt:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLP-PAANV

A0A3Q7GRD3 Uncharacterized protein1.2e-1165.71Show/hide
Query:  LRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV
        L  G LSS C S + YSES  I G APSL I APTT V  TSLL + A  ASAAAPPL PFFDL PAANV
Subjt:  LRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV

A0A5D3DHM5 Uncharacterized protein3.1e-0442.68Show/hide
Query:  MEAMDQEVSKIRAEIQKLSGIEETLASLSKSIERLGVQAEK---QKIMLTTIFVDLARGQKLPAGEELGSRSGTSAFSLRGG
        ++ +DQ+ S IR E+ KLS IEE LAS++KSIERLG+QAEK   Q+++L  I   +     +  G E  S  G+   S+  G
Subjt:  MEAMDQEVSKIRAEIQKLSGIEETLASLSKSIERLGVQAEK---QKIMLTTIFVDLARGQKLPAGEELGSRSGTSAFSLRGG

A0A6N2B0B0 Uncharacterized protein7.9e-0857.75Show/hide
Query:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV
        SL  G LSS+C S + YSE   I G APSL + APT V   TSLL + A  ASAA  PL P+FDL PAANV
Subjt:  SLRGGCLSSKCHSQTGYSESAIIFGSAPSLRILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATGGATCAAGAGGTCTCGAAAATTCGGGCTGAAATTCAGAAATTATCGGGAATTGAAGAAACTCTGGCTTCTTTGTCCAAAAGCATCGAACGATTA
GGAGTTCAGGCCGAAAAGCAAAAAATTATGTTGACAACCATTTTCGTTGACTTAGCGCGCGGACAAAAGCTTCCTGCTGGTGAGGAATTGGGTAGTCGGAGTGGA
ACGTCGGCTTTTTCGCTTAGGGGTGGATGTTTATCAAGCAAATGCCACAGCCAAACAGGGTACTCTGAGTCTGCCATAATTTTTGGATCTGCACCTTCCTTGAGA
ATATTAGCACCAACTACAGTAGTAGACTTCACCTCTTTACTTAGAATTGATGCTTTAGGAGCATCAGCAGCTGCACCCCCTTTAGATCCCTTCTTTGATTTGCCT
CCGGCAGCAAATGTTCGTACTGATCTGAAACTAGGATCAAATGATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATGGATCAAGAGGTCTCGAAAATTCGGGCTGAAATTCAGAAATTATCGGGAATTGAAGAAACTCTGGCTTCTTTGTCCAAAAGCATCGAACGATTA
GGAGTTCAGGCCGAAAAGCAAAAAATTATGTTGACAACCATTTTCGTTGACTTAGCGCGCGGACAAAAGCTTCCTGCTGGTGAGGAATTGGGTAGTCGGAGTGGA
ACGTCGGCTTTTTCGCTTAGGGGTGGATGTTTATCAAGCAAATGCCACAGCCAAACAGGGTACTCTGAGTCTGCCATAATTTTTGGATCTGCACCTTCCTTGAGA
ATATTAGCACCAACTACAGTAGTAGACTTCACCTCTTTACTTAGAATTGATGCTTTAGGAGCATCAGCAGCTGCACCCCCTTTAGATCCCTTCTTTGATTTGCCT
CCGGCAGCAAATGTTCGTACTGATCTGAAACTAGGATCAAATGATGACTAA
Protein sequenceShow/hide protein sequence
MEAMDQEVSKIRAEIQKLSGIEETLASLSKSIERLGVQAEKQKIMLTTIFVDLARGQKLPAGEELGSRSGTSAFSLRGGCLSSKCHSQTGYSESAIIFGSAPSLR
ILAPTTVVDFTSLLRIDALGASAAAPPLDPFFDLPPAANVRTDLKLGSNDD