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ClCG04G001730 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G001730
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFlocculation protein FLO11-like
Genome locationCG_Chr04:6203345..6204414
RNA-Seq ExpressionClCG04G001730
SyntenyClCG04G001730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042431.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.8e-0761.36Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL
        LIRE I NLP+ FND S+ +YQKVH+RGVCF++SP ++NS+L +
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL

KAA0045250.1 uncharacterized protein E6C27_scaffold30G002660 [Cucumis melo var. makuwa]1.4e-0769.77Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLD
        LIREFI NLP  FND SSPDYQ VH+RG  F+ISP +IN FL+
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLD

TYK02780.1 uncharacterized protein E5676_scaffold145G00390 [Cucumis melo var. makuwa]6.1e-0862.75Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDLCCLSSSW
        LIREF+ NLPT FND SSPDYQ +H+RG  FSI+P +IN FL      SSW
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDLCCLSSSW

TYK18155.1 uncharacterized protein E5676_scaffold411G00870 [Cucumis melo var. makuwa]1.8e-0764.81Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL----DLCCLSSS
        LIREFI NLP  FND SSP+YQ VH+RG  F ISPA+IN FL    D+ C SSS
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL----DLCCLSSS

XP_008460260.1 PREDICTED: uncharacterized protein LOC103499138 [Cucumis melo]4.7e-0871.43Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL
        LIREF+ NLP  FND SSPDYQ+VH+RG  FSI+PA+IN FL
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL

TrEMBL top hitse value%identityAlignment
A0A1S3CC38 uncharacterized protein LOC1034991382.3e-0871.43Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL
        LIREF+ NLP  FND SSPDYQ+VH+RG  FSI+PA+IN FL
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFL

A0A5A7TLH4 Flocculation protein FLO11-like8.6e-0861.36Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL
        LIRE I NLP+ FND S+ +YQKVH+RGVCF++SP ++NS+L +
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL

A0A5D3BI15 Flocculation protein FLO11-like8.6e-0861.36Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL
        LIRE I NLP+ FND S+ +YQKVH+RGVCF++SP ++NS+L +
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDL

A0A5D3BUI0 Uncharacterized protein3.0e-0862.75Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDLCCLSSSW
        LIREF+ NLPT FND SSPDYQ +H+RG  FSI+P +IN FL      SSW
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDLCCLSSSW

A0A5D3D6T7 Uncharacterized protein6.6e-0869.77Show/hide
Query:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLD
        LIREFI NLP  FND SSPDYQ VH+RG  F+ISP +IN FL+
Subjt:  LIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTGTGGTCTGCTAATAGGGAGTCCACTATCCCTTTCGTGCCCCAAAGCTCTAGTTTATCTTCTGTTGTTGATAAGGATCCTACTTCTAACATTTTTAGA
AGCTTAGTTTTGTATACTAATTTTTCTCATGATGCTTCCCTTCCGGATGATCCTTCTGTGAGTGGTATGTTTGATGGTGTGTCGTCTATTTCTGATCTTCCTCAA
ACTTCTTTGCATGTTGAGTCTCCTGTTTTCGAAAATGAGTCTAATGTTGTGCATGATTTTGTTGTTGGTGGTGATACTAAAAACGCTGATGTTGAGGGTCCATCT
ACTGTTGAAATACCTGTTGATTTGCTACTGATGTTGGTGACATGTTTGTTGATACTAATCTTTTCTCTCCTGGTCGCCCAAGTGTATCTTCTTTTGGGAATGATG
CCCCTGATCATTCTCCTCATTCTCCCATTAATGAAACCCTGTCTATTTCTGTTGATGCTTCTTCGAGTAGTTCCGATGATGATGATGTGCCGATTGCCTCTCATG
GAAAATCTCGTGCTTCCAAGTCCTCTCATTCTACTCCAACAGATGTTGGACCTTCTTCCCGTACTCACTCCAGCCAGTCTAAGGCTGCCAAGCAACCAAGTGGGT
TTAATTCTGACTCCCCTCATTAGTCCAGCTTTGAGGATGATATTGTGTTGCCTTATCCACGATCTCGTGCTTATTCGTGAGTTTATTGCCAATCTTCCTACTGGT
TTTAACGATCGTAGCAGTCCTGACTACCAAAAGGTTCATGTGCGAGGTGTGTGCTTCTCTATTTCGCCTGCCATTATTAATTCTTTTTTGGACTTGTGCTGCCTC
TCCTCCTCTTGGCAATGCCCATCCTTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTGTGGTCTGCTAATAGGGAGTCCACTATCCCTTTCGTGCCCCAAAGCTCTAGTTTATCTTCTGTTGTTGATAAGGATCCTACTTCTAACATTTTTAGA
AGCTTAGTTTTGTATACTAATTTTTCTCATGATGCTTCCCTTCCGGATGATCCTTCTGTGAGTGGTATGTTTGATGGTGTGTCGTCTATTTCTGATCTTCCTCAA
ACTTCTTTGCATGTTGAGTCTCCTGTTTTCGAAAATGAGTCTAATGTTGTGCATGATTTTGTTGTTGGTGGTGATACTAAAAACGCTGATGTTGAGGGTCCATCT
ACTGTTGAAATACCTGTTGATTTGCTACTGATGTTGGTGACATGTTTGTTGATACTAATCTTTTCTCTCCTGGTCGCCCAAGTGTATCTTCTTTTGGGAATGATG
CCCCTGATCATTCTCCTCATTCTCCCATTAATGAAACCCTGTCTATTTCTGTTGATGCTTCTTCGAGTAGTTCCGATGATGATGATGTGCCGATTGCCTCTCATG
GAAAATCTCGTGCTTCCAAGTCCTCTCATTCTACTCCAACAGATGTTGGACCTTCTTCCCGTACTCACTCCAGCCAGTCTAAGGCTGCCAAGCAACCAAGTGGGT
TTAATTCTGACTCCCCTCATTAGTCCAGCTTTGAGGATGATATTGTGTTGCCTTATCCACGATCTCGTGCTTATTCGTGAGTTTATTGCCAATCTTCCTACTGGT
TTTAACGATCGTAGCAGTCCTGACTACCAAAAGGTTCATGTGCGAGGTGTGTGCTTCTCTATTTCGCCTGCCATTATTAATTCTTTTTTGGACTTGTGCTGCCTC
TCCTCCTCTTGGCAATGCCCATCCTTCTACTGA
Protein sequenceShow/hide protein sequence
MILWSANRESTIPFVPQSSSLSSVVDKDPTSNIFRSLVLYTNFSHDASLPDDPSVSGMFDGVSSISDLPQTSLHVESPVFENESNVVHDFVVGGDTKNADVEGPS
TVEIPVDLLLMLVTCLLILIFSLLVAQVYLLLGMMPLIILLILPLMKPCLFLLMLLRVVPMMMMCRLPLMENLVLPSPLILLQQMLDLLPVLTPASLRLPSNQVG
LILTPLISPALRMILCCLIHDLVLIREFIANLPTGFNDRSSPDYQKVHVRGVCFSISPAIINSFLDLCCLSSSWQCPSFY