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ClCG04G001780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G001780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:6321125..6325517
RNA-Seq ExpressionClCG04G001780
SyntenyClCG04G001780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038892557.1 uncharacterized protein LOC120081601 [Benincasa hispida]5.5e-0632.62Show/hide
Query:  ERRQTSRKRKSSQPYTPLVDTVKVTSKGRRYIQPGERPT-DRSPVPYDPAHRVPNDIMNEFMSWLTSEDIGPHKSGTGILFRRNC---TTEQLFEELTQD
        + R+ SRKRK    YTP     K      ++  PG   +  RS V Y+ AH +P++IM + MSW++ ++       T    R N      +Q FEEL   
Subjt:  ERRQTSRKRKSSQPYTPLVDTVKVTSKGRRYIQPGERPT-DRSPVPYDPAHRVPNDIMNEFMSWLTSEDIGPHKSGTGILFRRNC---TTEQLFEELTQD

Query:  NE------------WVKNDFLIRPKKCAHQFTTLPYGILSP
        N             ++K+ F  RP  C H+FT LP G++SP
Subjt:  NE------------WVKNDFLIRPKKCAHQFTTLPYGILSP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGCGAGCATAGAGTAAAGATCGAGCAGAAGGATGAAGAGGAAGAGGAACGGAGGCAGACTAGTAGGAAGAGAAAGTCATCCCAACCGTACACCCCT
CTAGTTGATACGGTCAAGGTGACGAGTAAGGGACGACGATACATTCAACCAGGGGAACGCCCCACTGATAGGTCGCCCGTCCCTTACGATCCAGCTCATCGAGTG
CCTAATGACATCATGAATGAATTCATGAGTTGGCTAACGAGCGAGGATATAGGTCCTCATAAGTCGGGCACGGGAATACTCTTCAGGAGGAATTGCACAACAGAG
CAGTTGTTCGAGGAGCTTACACAAGACAATGAATGGGTCAAGAACGATTTCCTCATTCGACCGAAGAAGTGTGCACACCAGTTCACGACTTTGCCCTATGGCATA
TTGTCACCTTACCTCACCTCTGCCGATTGCCGCTCCTCTACTTCTACCGTCAACCGTGATTGTTGCTCCTACGGTACCATGACTGCTTGTTCTGCCCGTTCCGTT
CTACTTGTCGTCGTCTGTGCTCACTGCTCAGATCAATCCGTTCATCTGCCATCATGCTCAGATCCAGTCATGACTGTCGATTTGTCTGTCGTCACTTCGCCGGTT
CGTGTTCGTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGGCGAGCATAGAGTAAAGATCGAGCAGAAGGATGAAGAGGAAGAGGAACGGAGGCAGACTAGTAGGAAGAGAAAGTCATCCCAACCGTACACCCCT
CTAGTTGATACGGTCAAGGTGACGAGTAAGGGACGACGATACATTCAACCAGGGGAACGCCCCACTGATAGGTCGCCCGTCCCTTACGATCCAGCTCATCGAGTG
CCTAATGACATCATGAATGAATTCATGAGTTGGCTAACGAGCGAGGATATAGGTCCTCATAAGTCGGGCACGGGAATACTCTTCAGGAGGAATTGCACAACAGAG
CAGTTGTTCGAGGAGCTTACACAAGACAATGAATGGGTCAAGAACGATTTCCTCATTCGACCGAAGAAGTGTGCACACCAGTTCACGACTTTGCCCTATGGCATA
TTGTCACCTTACCTCACCTCTGCCGATTGCCGCTCCTCTACTTCTACCGTCAACCGTGATTGTTGCTCCTACGGTACCATGACTGCTTGTTCTGCCCGTTCCGTT
CTACTTGTCGTCGTCTGTGCTCACTGCTCAGATCAATCCGTTCATCTGCCATCATGCTCAGATCCAGTCATGACTGTCGATTTGTCTGTCGTCACTTCGCCGGTT
CGTGTTCGTCGATAA
Protein sequenceShow/hide protein sequence
MVKGEHRVKIEQKDEEEEERRQTSRKRKSSQPYTPLVDTVKVTSKGRRYIQPGERPTDRSPVPYDPAHRVPNDIMNEFMSWLTSEDIGPHKSGTGILFRRNCTTE
QLFEELTQDNEWVKNDFLIRPKKCAHQFTTLPYGILSPYLTSADCRSSTSTVNRDCCSYGTMTACSARSVLLVVVCAHCSDQSVHLPSCSDPVMTVDLSVVTSPV
RVRR