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ClCG04G001908 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G001908
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGlial fibrillary acidic protein-like
Genome locationCG_Chr04:6627366..6627806
RNA-Seq ExpressionClCG04G001908
SyntenyClCG04G001908
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.6e-3152.74Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        +++KNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    ++ LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+   ++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

KAA0033848.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.2e-3051.97Show/hide
Query:  KRKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH
        + KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A ++ LQNS KEYK ++TE + +N LLQE V S EH
Subjt:  KRKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH

Query:  QLLMCRNAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
        QLL+CRNAREVVT+D+A+LK E++E+ A+FA+W+DEY+++R  Y++V+GQ+E
Subjt:  QLLMCRNAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.7e-2045.52Show/hide
Query:  KRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN
        K+K  +L ++ D L+ EA   ++  K L +        +AN    +E + T+      E++ LQNS KEYKSQL +VE++N  LQ+ V S E QLL+CR 
Subjt:  KRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN

Query:  AREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
        A+EV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+  G++E
Subjt:  AREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.5e-3152.05Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        M++KNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    ++ LQ+  +EYKSQL E + +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+ DDYAQL ++YQEMS +F +WKDEY  LRR YD+  G++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]5.6e-2650Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        +++KNKRLLR++  LH E E +KE                  FQ+AL EQA SSQ+    ++ LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+   ++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like2.7e-2650Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        +++KNKRLLR++  LH E E +KE                  FQ+AL EQA SSQ+    ++ LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+   ++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

A0A5A7SM49 Glial fibrillary acidic protein-like1.3e-3152.74Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        +++KNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    ++ LQ+S +EYKSQL E E +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+   ++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

A0A5A7T0F3 Glial fibrillary acidic protein-like1.3e-2045.52Show/hide
Query:  KRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN
        K+K  +L ++ D L+ EA   ++  K L +        +AN    +E + T+      E++ LQNS KEYKSQL +VE++N  LQ+ V S E QLL+CR 
Subjt:  KRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRN

Query:  AREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
        A+EV+TDDYAQL ++YQEMS +F +WKDEY  LRR YD+  G++E
Subjt:  AREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

A0A5A7VDD9 Glial fibrillary acidic protein-like3.6e-3152.05Show/hide
Query:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR
        M++KNKRLLR++  LH E E +K  I +L+ E+E++N +   FQ+AL EQA SSQ+    ++ LQ+  +EYKSQL E + +N  LQ+ V S E QLL+CR
Subjt:  MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCR

Query:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
         AREV+ DDYAQL ++YQEMS +F +WKDEY  LRR YD+  G++E
Subjt:  NAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

A0A5D3BQ93 Glial fibrillary acidic protein-like1.1e-3051.97Show/hide
Query:  KRKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH
        + KN + LR+++ VL  E E  +E +      KEL+ ELE ++KV  +FQSAL EQ TS+Q+I A ++ LQNS KEYK ++TE + +N LLQE V S EH
Subjt:  KRKNKRLLRDVD-VLHNEAETQKEYI------KELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEH

Query:  QLLMCRNAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE
        QLL+CRNAREVVT+D+A+LK E++E+ A+FA+W+DEY+++R  Y++V+GQ+E
Subjt:  QLLMCRNAREVVTDDYAQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAGGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTAAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGAAATGCACGAGAGGTGGTGACAGACGACTAT
GCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAAATTTTGCGGTATGGAAAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAATA
A
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGAAGAATAAGAGATTGCTAAGAGATGTTGATGTTCTGCACAATGAGGCGGAAACACAAAAGGAGTACATCAAAGAGTTACAACAAGAGTTGGAGAGAATGAA
CAAGGTCGTTGCAAATTTTCAAAGCGCCTTAGAAGAGCAGGCCACATCATCCCAAAAGATTGTTGCAGAGGTTAAGAATCTACAGAATTCAGCCAAAGAATATAAATCCC
AGCTTACTGAGGTAGAACATAGAAACATACTTCTCCAGGAAGTTGTTACAAGTTTTGAACACCAATTGTTGATGTGTCGAAATGCACGAGAGGTGGTGACAGACGACTAT
GCTCAGCTGAAGAAGGAATATCAGGAAATGTCAGCAAATTTTGCGGTATGGAAAGATGAGTATAGTATGTTGAGACGCGATTACGATAATGTCAGAGGGCAGGTAGAATA
A
Protein sequenceShow/hide protein sequence
MKRKNKRLLRDVDVLHNEAETQKEYIKELQQELERMNKVVANFQSALEEQATSSQKIVAEVKNLQNSAKEYKSQLTEVEHRNILLQEVVTSFEHQLLMCRNAREVVTDDY
AQLKKEYQEMSANFAVWKDEYSMLRRDYDNVRGQVE