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ClCG04G002080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G002080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:6972017..6973329
RNA-Seq ExpressionClCG04G002080
SyntenyClCG04G002080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040543.1 uncharacterized protein E6C27_scaffold262G00970 [Cucumis melo var. makuwa]2.9e-0640Show/hide
Query:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
        +Q  HVP++   V PP  D           D PLL++L   D G+ IP+ L   I H+L TES +L  +I+EL   R  I+ LV   S+ LP F  TSTS
Subjt:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
TrEMBL top hitse value%identityAlignment
A0A1S3CMY0 uncharacterized protein LOC1035027465.1e-0440Show/hide
Query:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
        +Q  HVP +         D HP T+  R  D    D+     EG ++  EL TRI++ L TES AL   I  LS RR E+D+L+R L  + P+   TS  
Subjt:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS

Query:  QPPSG
        QPPSG
Subjt:  QPPSG
A0A5A7TBV1 Uncharacterized protein1.4e-0640Show/hide
Query:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
        +Q  HVP++   V PP  D           D PLL++L   D G+ IP+ L   I H+L TES +L  +I+EL   R  I+ LV   S+ LP F  TSTS
Subjt:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
A0A5A7URQ6 Uncharacterized protein5.1e-0440Show/hide
Query:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS
        +Q  HVP +         D HP T+  R  D    D+     EG ++  EL TRI++ L TES AL   I  LS RR E+D+L+R L  + P+   TS  
Subjt:  YQNVHVPSVCFLVSPPLSDDHPSTKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTS

Query:  QPPSG
        QPPSG
Subjt:  QPPSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATGTTGAGTGTCCTTCTACTGTTGAAAAATGTTGCTATTGATGTTAACCATATGTTTGCTCATACTAATCCTATCTTCTCTGATCGTCCTGATGTATCATTTTT
TGGGGATGATTCTCACTGCTCCTCTACTGATGATGATCATTCTATTTCTGTGGATGTGTCTGTGACTAGTTCTGACGATGACAATGTTCCGATTGCTTTTCTCGGCAAAT
CACCAAATCTTCATAATGGTTTTAATGACCCGAGCAACCCTAATTATCAAAATGTTCATGTGCCGAGTGTGTGCTTTTTGGTCTCTCCTCCTCTTAGTGATGACCATCCT
TCTACTAAGGCGCTTCGCCCTGTTGATATGCCTTTGCTAGATGACCTCCATGTTCTTGACGAGGGCATTCATATTCCTGTTGAGCTTGGTACTCGAATTCTTCACATTTT
GAAGACAGAATCTTATGCTCTGTGTTTGATGATCCGTGAGCTTTCTAATCGTCGTGCTGAGATTGATTCTCTGGTTCGTTTACTCAGCATTGCTTTGCCTAATTTTGAGG
GTACTTCAACTTCTCAACCTCCGTCTGGTTTGGCT
mRNA sequenceShow/hide mRNA sequence
ATGCCGATGTTGAGTGTCCTTCTACTGTTGAAAAATGTTGCTATTGATGTTAACCATATGTTTGCTCATACTAATCCTATCTTCTCTGATCGTCCTGATGTATCATTTTT
TGGGGATGATTCTCACTGCTCCTCTACTGATGATGATCATTCTATTTCTGTGGATGTGTCTGTGACTAGTTCTGACGATGACAATGTTCCGATTGCTTTTCTCGGCAAAT
CACCAAATCTTCATAATGGTTTTAATGACCCGAGCAACCCTAATTATCAAAATGTTCATGTGCCGAGTGTGTGCTTTTTGGTCTCTCCTCCTCTTAGTGATGACCATCCT
TCTACTAAGGCGCTTCGCCCTGTTGATATGCCTTTGCTAGATGACCTCCATGTTCTTGACGAGGGCATTCATATTCCTGTTGAGCTTGGTACTCGAATTCTTCACATTTT
GAAGACAGAATCTTATGCTCTGTGTTTGATGATCCGTGAGCTTTCTAATCGTCGTGCTGAGATTGATTCTCTGGTTCGTTTACTCAGCATTGCTTTGCCTAATTTTGAGG
GTACTTCAACTTCTCAACCTCCGTCTGGTTTGGCT
Protein sequenceShow/hide protein sequence
MPMLSVLLLLKNVAIDVNHMFAHTNPIFSDRPDVSFFGDDSHCSSTDDDHSISVDVSVTSSDDDNVPIAFLGKSPNLHNGFNDPSNPNYQNVHVPSVCFLVSPPLSDDHP
STKALRPVDMPLLDDLHVLDEGIHIPVELGTRILHILKTESYALCLMIRELSNRRAEIDSLVRLLSIALPNFEGTSTSQPPSGLA