; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G002110 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G002110
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSeed maturation protein
Genome locationCG_Chr04:7054151..7054847
RNA-Seq ExpressionClCG04G002110
SyntenyClCG04G002110
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0031210 - phosphatidylcholine binding (molecular function)
GO:0048030 - disaccharide binding (molecular function)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595576.1 18 kDa seed maturation protein, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6484.88Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST
        MQSGK AMESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKKQAKIHEAEL KQEAR+HNAA++Q+ TA ATHG HPTTH TATYST
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST

Query:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS
        TGA GYTTGTQQMSA+PGHGTGQPTG VTEGVVG HPIG QTGTGRT TAHNP VGG  G  T   T GGYS
Subjt:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS

KGN54793.1 hypothetical protein Csa_011934 [Cucumis sativus]8.2e-6989.08Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY
        MQSGKKA+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT  AAATHGTHPTTH TATY
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY

Query:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS
        STTGAHGYTTGTQQ SALPGHGTGQPTG VTEGVVGAHPIGT+TGTGRT TAHNP  GG TGYGTGT T G Y+
Subjt:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS

XP_004146409.2 18 kDa seed maturation protein [Cucumis sativus]5.9e-6782.8Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAA--------------ATH
        MQSGKKA+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT A              ATH
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAA--------------ATH

Query:  GTHPTTHPTATYSTTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS
        GTHPTTH TATYSTTGAHGYTTGTQQ SALPGHGTGQPTG VTEGVVGAHPIGT+TGTGRT TAHNP  GG TGYGTGT T G Y+
Subjt:  GTHPTTHPTATYSTTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS

XP_008442129.1 PREDICTED: 18 kDa seed maturation protein [Cucumis melo]1.7e-6686.44Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY
        MQSGKKAMES+KESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT  AA THGTHPTTH TAT+
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY

Query:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS
        STTGAHGYTTGT QMSALPGHGTGQPTG VTEGVVG HPIGT TGTGRT TAHNP  GG TGYGTGT   GT G Y+
Subjt:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS

XP_038883398.1 11 kDa late embryogenesis abundant protein [Benincasa hispida]2.5e-7090.29Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAA-THGTHPTTHPTATYS
        MQSGKKA+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAEL KQEAR+HNAAVRQ+ATAAA THGTHPTTHPTATYS
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAA-THGTHPTTHPTATYS

Query:  TTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYG--TGTGTDGGYS
        T+GAHGYTTGTQQMSALPGHGTGQPTG   EGVVGAHPIGT+TGTGRT TAHNP VGG TGYG  TGTGT GG+S
Subjt:  TTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYG--TGTGTDGGYS

TrEMBL top hitse value%identityAlignment
A0A0A0KZ59 Uncharacterized protein4.0e-6989.08Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY
        MQSGKKA+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT  AAATHGTHPTTH TATY
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY

Query:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS
        STTGAHGYTTGTQQ SALPGHGTGQPTG VTEGVVGAHPIGT+TGTGRT TAHNP  GG TGYGTGT T G Y+
Subjt:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS

A0A1S3B5R4 18 kDa seed maturation protein8.3e-6786.44Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY
        MQSGKKAMES+KESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT  AA THGTHPTTH TAT+
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY

Query:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS
        STTGAHGYTTGT QMSALPGHGTGQPTG VTEGVVG HPIGT TGTGRT TAHNP  GG TGYGTGT   GT G Y+
Subjt:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS

A0A5D3C2B4 18 kDa seed maturation protein8.3e-6786.44Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY
        MQSGKKAMES+KESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKK+AKIHEAEL KQEARQHNAAVRQ+AT  AA THGTHPTTH TAT+
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSAT--AAATHGTHPTTHPTATY

Query:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS
        STTGAHGYTTGT QMSALPGHGTGQPTG VTEGVVG HPIGT TGTGRT TAHNP  GG TGYGTGT   GT G Y+
Subjt:  STTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGT---GTDGGYS

A0A6J1EAR4 late embryogenesis abundant protein 462.5e-6384.88Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST
        MQSGK AMESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKKQAKIHEAEL KQEAR+HNAA++Q+ TA ATHG HPTTH TATYST
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST

Query:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS
        TGA GYTTGTQQMSA+PGHGTGQPTG VTEGVVG HPIG QTGTGRT TAHNP VGG  G  T   T GGYS
Subjt:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS

A0A6J1HN24 late embryogenesis abundant protein 463.3e-6385.06Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST
        MQSGK AMESMKESAANVAASAKAGMDKTKATVQEKMEKVTA DPLAKEIAEEKKQAKIHEAEL KQEARQHNAA++Q+ TA ATHG HPTTH TATYST
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST

Query:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGG--ATGYGTGTGTDGGYS
        TGA GYTTGTQQMSA+PGHGTGQPT  VTEGVVG HPIG QTGTGRT TAHNP VGG  AT Y TG    GGYS
Subjt:  TGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGG--ATGYGTGTGTDGGYS

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1138.7e-0536.59Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGY-
        M+SMK++    AASAKAGM+K KA++QEK++++   DP  KE+A E+K+ +  +AEL+KQEAR HNA    +A      G   T + TA Y+     GY 
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGY-

Query:  TTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGG
         TG       P  G+G  TG   +         T+   G T     P    +   GT   T GG
Subjt:  TTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGG

P46515 11 kDa late embryogenesis abundant protein2.1e-1958.18Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST
        MQSGK A  S KE+AANVAASAKAGM+KTKA++QEK EK+TAHDP+ KE+A EKK+ + HEAE +KQ A++HNAA +Q  T     GTH       +Y+T
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYST

Query:  TGAHGYTTGT
        T   G+ TGT
Subjt:  TGAHGYTTGT

Q00747 Protein LE251.4e-0745.65Show/hide
Query:  ESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAH
        ++  + A++AKAGM+KTKA VQEK E++T  DPL KE+A EKK+ ++  AE+ K++A+  +AA +Q    AAT GT      T  Y  TG H
Subjt:  ESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAH

Q01417 18 kDa seed maturation protein2.1e-4364.91Show/hide
Query:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAA--THGTHP--TTHPTA
        MQ GKKA ES+KE+A N+ ASAKAGM+KTKATVQEK E++TA DP+ KE+A +KK+AK+++AEL KQ ARQHN A +QSAT A    HG H   T   TA
Subjt:  MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAA--THGTHP--TTHPTA

Query:  TYSTTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGAT---GYGTG
        TYSTTG +G   G  Q SA+PGHGTGQPTG VTEGVVG+HPIGT  G G TATAHN R GG     GYGTG
Subjt:  TYSTTGAHGYTTGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGAT---GYGTG

Q9FG31 Late embryogenesis abundant protein 461.8e-3459.15Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGYT
        M+SMKE+A+N+AASAK+GMDKTKAT++EK EK+   DP+ K++A + K+ KI++AE+QK+E RQHNAA++++A A    G       TAT+STTG  G+ 
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGYT

Query:  TGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRV--GGATGYGTGTGTDG
        TGT QMSALPGHGTGQ T  V EG     PIG  TGTGRT TAHN  V  GGATGYGTG G  G
Subjt:  TGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRV--GGATGYGTGTGTDG

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-51.3e-3559.15Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGYT
        M+SMKE+A+N+AASAK+GMDKTKAT++EK EK+   DP+ K++A + K+ KI++AE+QK+E RQHNAA++++A A    G       TAT+STTG  G+ 
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGYT

Query:  TGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRV--GGATGYGTGTGTDG
        TGT QMSALPGHGTGQ T  V EG     PIG  TGTGRT TAHN  V  GGATGYGTG G  G
Subjt:  TGTQQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRV--GGATGYGTGTGTDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCAGGAAAGAAGGCAATGGAATCCATGAAGGAATCGGCTGCGAATGTTGCAGCCTCCGCCAAGGCCGGCATGGACAAGACTAAAGCCACTGTGCAAGAGAAGAT
GGAGAAAGTTACGGCCCATGATCCGTTGGCAAAAGAAATTGCAGAGGAGAAGAAACAAGCAAAGATCCACGAGGCAGAGCTCCAGAAACAGGAGGCGCGTCAGCACAACG
CCGCTGTCAGACAGTCTGCTACGGCGGCAGCCACACACGGGACACACCCAACAACCCACCCCACCGCCACATACTCCACCACTGGAGCCCATGGCTACACCACTGGGACC
CAGCAGATGTCGGCTCTGCCTGGGCACGGCACTGGCCAACCAACCGGCGGTGTGACCGAGGGCGTCGTTGGGGCACACCCGATTGGAACCCAGACTGGCACTGGACGGAC
AGCGACAGCCCACAACCCTCGTGTTGGTGGTGCGACTGGGTACGGCACCGGCACCGGCACCGACGGTGGCTATAGTTAG
mRNA sequenceShow/hide mRNA sequence
GGTGAAGAGAAATAGAAATAGAAATGCAATCAGGAAAGAAGGCAATGGAATCCATGAAGGAATCGGCTGCGAATGTTGCAGCCTCCGCCAAGGCCGGCATGGACAAGACT
AAAGCCACTGTGCAAGAGAAGATGGAGAAAGTTACGGCCCATGATCCGTTGGCAAAAGAAATTGCAGAGGAGAAGAAACAAGCAAAGATCCACGAGGCAGAGCTCCAGAA
ACAGGAGGCGCGTCAGCACAACGCCGCTGTCAGACAGTCTGCTACGGCGGCAGCCACACACGGGACACACCCAACAACCCACCCCACCGCCACATACTCCACCACTGGAG
CCCATGGCTACACCACTGGGACCCAGCAGATGTCGGCTCTGCCTGGGCACGGCACTGGCCAACCAACCGGCGGTGTGACCGAGGGCGTCGTTGGGGCACACCCGATTGGA
ACCCAGACTGGCACTGGACGGACAGCGACAGCCCACAACCCTCGTGTTGGTGGTGCGACTGGGTACGGCACCGGCACCGGCACCGACGGTGGCTATAGTTAG
Protein sequenceShow/hide protein sequence
MQSGKKAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTAHDPLAKEIAEEKKQAKIHEAELQKQEARQHNAAVRQSATAAATHGTHPTTHPTATYSTTGAHGYTTGT
QQMSALPGHGTGQPTGGVTEGVVGAHPIGTQTGTGRTATAHNPRVGGATGYGTGTGTDGGYS