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ClCG04G004110 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G004110
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF4283 domain-containing protein
Genome locationCG_Chr04:15758362..15759083
RNA-Seq ExpressionClCG04G004110
SyntenyClCG04G004110
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]1.6e-1551.58Show/hide
Query:  SSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYLLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
        S+WASLF +     L +T P   G+ ++VVPSEEV+   IR+WE SLV           L RI +ELWT+ GL V+ASAVGKPI  D+ TKERRR
Subjt:  SSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYLLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

KAA0062320.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]3.1e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]6.9e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYL----------------------------------------
        KS+WASLF + S   L +TLP + G+K+VV P EEV++  I++WE SLVGQ +D+K PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYL----------------------------------------

Query:  ------------------------------------LARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+ASAVGKPI+ D+ TKERRR
Subjt:  ------------------------------------LARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]3.1e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

XP_008460524.1 PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo]3.1e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

TrEMBL top hitse value%identityAlignment
A0A1S3CC83 uncharacterized protein LOC1034993231.5e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein8.0e-1651.58Show/hide
Query:  SSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYLLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
        S+WASLF +     L +T P   G+ ++VVPSEEV+   IR+WE SLV           L RI +ELWT+ GL V+ASAVGKPI  D+ TKERRR
Subjt:  SSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYLLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

A0A5A7V507 DUF4283 domain-containing protein1.5e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

A0A5D3D5X6 Reverse transcriptase domain-containing protein3.4e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYL----------------------------------------
        KS+WASLF + S   L +TLP + G+K+VV P EEV++  I++WE SLVGQ +D+K PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYL----------------------------------------

Query:  ------------------------------------LARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+ASAVGKPI+ D+ TKERRR
Subjt:  ------------------------------------LARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

A0A5D3DSG9 DUF4283 domain-containing protein1.5e-1431.98Show/hide
Query:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------
        KS+WASLF + +   L +TLP   G+K+VV+P+EEV++  IR+WE SLVGQ +DAK PY                                         
Subjt:  KSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPY-----------------------------------------

Query:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR
                                            L ++ +ELWT+ GL V+A AVGKPI+ D+ TKERRR
Subjt:  -----------------------------------LLARIHIELWTDRGLVVIASAVGKPIAYDMTTKERRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTCCACTAACAATTGAAATTCCTTCGGGGGGCCAGTCTAGAGTAGGCATTGAAGGTGTAGCTAATTTGAAGTCGTCTTGGGCTTCCCTATTCCGTTCCCCATC
CTCCATGCAGTTGGACTTCACCCTTCCGATGGTGGAAGGGAACAAAGTGGTGGTGGTGCCCTCCGAGGAAGTGTTGGAGGTGCGGATTAGGATGTGGGAGAGATCTTTGG
TGGGTCAGTTTGTTGATGCTAAATCGCCTTATTTGTTAGCTAGGATCCATATCGAGTTGTGGACAGATAGAGGTTTGGTTGTGATAGCTAGTGCAGTAGGGAAACCAATT
GCCTATGATATGACAACTAAAGAAAGGCGTAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTCCACTAACAATTGAAATTCCTTCGGGGGGCCAGTCTAGAGTAGGCATTGAAGGTGTAGCTAATTTGAAGTCGTCTTGGGCTTCCCTATTCCGTTCCCCATC
CTCCATGCAGTTGGACTTCACCCTTCCGATGGTGGAAGGGAACAAAGTGGTGGTGGTGCCCTCCGAGGAAGTGTTGGAGGTGCGGATTAGGATGTGGGAGAGATCTTTGG
TGGGTCAGTTTGTTGATGCTAAATCGCCTTATTTGTTAGCTAGGATCCATATCGAGTTGTGGACAGATAGAGGTTTGGTTGTGATAGCTAGTGCAGTAGGGAAACCAATT
GCCTATGATATGACAACTAAAGAAAGGCGTAGGTAG
Protein sequenceShow/hide protein sequence
MGSPLTIEIPSGGQSRVGIEGVANLKSSWASLFRSPSSMQLDFTLPMVEGNKVVVVPSEEVLEVRIRMWERSLVGQFVDAKSPYLLARIHIELWTDRGLVVIASAVGKPI
AYDMTTKERRR