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ClCG04G004780 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G004780
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionactin cytoskeleton-regulatory complex protein PAN1-like
Genome locationCG_Chr04:18164893..18165099
RNA-Seq ExpressionClCG04G004780
SyntenyClCG04G004780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]1.3e-0455.88Show/hide
Query:  MYSKGVPILL--PVSSHSTLSPTP----FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPP
        M  KGVPI    P    S   P P      +L K SK NFGM PKGVPIPPSGPS RTS   Y PPPP
Subjt:  MYSKGVPILL--PVSSHSTLSPTP----FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPP

KAG6603463.1 hypothetical protein SDJN03_04072, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0578.38Show/hide
Query:  KGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPS
        KG   NF MYPKGVPIPPSG + RTSA+KYTPPPPPS
Subjt:  KGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPS

MBA0801286.1 hypothetical protein [Gossypium harknessii]2.1e-0455.88Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST
        M  KGVPI  P S+ ST  P P    T L       FGM PKGVPIPPSGPS RTS +   PPPPP T
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST

MBA0858619.1 hypothetical protein [Gossypium schwendimanii]1.5e-0555.71Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS
        M  KGVPI  P S+ ST  P P    T L       FGM PKGVPIPPSGPS RTSA+   PPPPP   S
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS

XP_011654399.2 proline-rich protein HaeIII subfamily 1-like [Cucumis sativus]1.5e-0553.62Show/hide
Query:  MYSKGVPILLPVSSHS-----TLSPTPFTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPS
        +YSKG+   +P S  S     +  P PF +L+K  KF+FGMYPKG+PIPPSGPS RTS +    PPPPS
Subjt:  MYSKGVPILLPVSSHS-----TLSPTPFTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPS

TrEMBL top hitse value%identityAlignment
A0A0D2NUV0 Uncharacterized protein5.1e-0454.41Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST
        M  KGVPI  P S+ ST  P P    T L       FGM PKGVPIPPSGPS  TS +   PPPPP T
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.8e-0454.41Show/hide
Query:  MYSKGVPI--LLPVSSHSTLSPTP----FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPP
        M  +GVPI    P    S   P P      +L K SK NFGM PKGVPIPPSGPS RTS   Y PPPP
Subjt:  MYSKGVPI--LLPVSSHSTLSPTP----FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPP

A0A7J8M3A1 Uncharacterized protein3.0e-0452.86Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS
        M  KGV I  P S+ ST  P P    T L       FGM PKGVPIPPSGPS RTSA+   PPPP ++ S
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS

A0A7J9GUN1 Uncharacterized protein1.0e-0455.88Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST
        M  KGVPI  P S+ ST  P P    T L       FGM PKGVPIPPSGPS RTS +   PPPPP T
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPST

A0A7J9LJX0 Uncharacterized protein7.2e-0655.71Show/hide
Query:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS
        M  KGVPI  P S+ ST  P P    T L       FGM PKGVPIPPSGPS RTSA+   PPPPP   S
Subjt:  MYSKGVPILLPVSSHSTLSPTP---FTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCGAAAGGCGTACCTATTCTTCTACCGGTTAGCTCACATTCAACTCTATCACCTACTCCATTTACTGTTCTAGAAAAGGGATCGAAATTCAATTTTGGAATGTA
TCCTAAAGGTGTACCTATTCCTCCATCTGGACCGAGTGGAAGAACTTCGGCTAACAAATATACTCCTCCACCACCTCCATCTACGCCAAGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCGAAAGGCGTACCTATTCTTCTACCGGTTAGCTCACATTCAACTCTATCACCTACTCCATTTACTGTTCTAGAAAAGGGATCGAAATTCAATTTTGGAATGTA
TCCTAAAGGTGTACCTATTCCTCCATCTGGACCGAGTGGAAGAACTTCGGCTAACAAATATACTCCTCCACCACCTCCATCTACGCCAAGTGAATGA
Protein sequenceShow/hide protein sequence
MYSKGVPILLPVSSHSTLSPTPFTVLEKGSKFNFGMYPKGVPIPPSGPSGRTSANKYTPPPPPSTPSE