; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G005240 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G005240
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF313 domain-containing protein
Genome locationCG_Chr04:18915986..18916894
RNA-Seq ExpressionClCG04G005240
SyntenyClCG04G005240
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40411.1 hypothetical protein RCOM_0610210 [Ricinus communis]2.8e-1032.85Show/hide
Query:  SNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKE-SFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG
        +N PY   + I+     + +++M K+L + D+    +RLS+    IK+ +FL EEE++KLE  + + V  MEP G   S ++++K   + ++  SYAL  
Subjt:  SNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKE-SFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG

Query:  GWYNTVARNSDA------LMRGEFVRVWYFRVNGRLW
        GW + VARN             + +++W FRV G LW
Subjt:  GWYNTVARNSDA------LMRGEFVRVWYFRVNGRLW

GAV86221.1 DUF313 domain-containing protein [Cephalotus follicularis]3.1e-0932.48Show/hide
Query:  RESSESSVDEETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSY
        R+ + ++ +E TEP+M        P      I+  +      +++K+L ++DV K+++RL+I  + +K  FL  EE++KLE  E + V V+EP  +  S+
Subjt:  RESSESSVDEETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSY

Query:  LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVEVV
        L L+K     +   SYAL  GW++ V+   + LM+   VR+W FR+   L F + VV
Subjt:  LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVEVV

GAV92282.1 DUF313 domain-containing protein [Cephalotus follicularis]5.3e-0938.26Show/hide
Query:  LMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVW
        +++K+L ++DV KS++RL+I  + +K  FL  EE++KLE  E + V V+EP  +  S+L L+K     +   SYAL  GW++ V+   + LM+   VR+W
Subjt:  LMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVW

Query:  YFRVNGRLWFGVEVV
         FR+   L F + VV
Subjt:  YFRVNGRLWFGVEVV

KCW54865.1 hypothetical protein EUGRSUZ_I00811 [Eucalyptus grandis]1.1e-0934.01Show/hide
Query:  PSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG
        PS  P ++   I++       +++EK L   D+ + + RLSI  K +++ FL+EEE + L   E + V+++EP  E    LRL+K     K+  SY LT 
Subjt:  PSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG

Query:  GWYNTVAR--NSDALMRGEFVRVWYFRVNGRLWFGVEVVGEVKRQFE
         W N VA     + LM+   +++W FRV+G LWF +  V    RQ++
Subjt:  GWYNTVAR--NSDALMRGEFVRVWYFRVNGRLWFGVEVVGEVKRQFE

XP_022156187.1 VID27-like protein [Momordica charantia]2.4e-3338.95Show/hide
Query:  SSSVSSTLNTENSHLNFLAMDVTAAAGETTDDDNVPSSSNESENSEIKTAAEGGKGKIVNTEIEQEATRSQEIEIGKQKVVYTKESASSSAVIVEDRESS
        + SV+  L  E +       +     G+   DD +    +E E  +I T  +    +I +  +E E  +   +E   Q       +AS++A    D++SS
Subjt:  SSSVSSTLNTENSHLNFLAMDVTAAAGETTDDDNVPSSSNESENSEIKTAAEGGKGKIVNTEIEQEATRSQEIEIGKQKVVYTKESASSSAVIVEDRESS

Query:  ESSVDE-ETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRL
        ES  +E ETE Q+  N P NFP  F K + DP SI PRILMEK+LR +DV ++++RLSI  K +KE+FL  +E+ ++ +GE M V V+EPD  TVS + L
Subjt:  ESSVDE-ETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRL

Query:  RKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFR-----VNGRLWFGVEVVGEVK-RQFEILEQMSQKWCHENILVP
        R+ R    +  SY LTG W   VARNSDAL RG  VRVWYF      V  RL F +EV    K    E +++++QKW  +NI  P
Subjt:  RKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFR-----VNGRLWFGVEVVGEVK-RQFEILEQMSQKWCHENILVP

TrEMBL top hitse value%identityAlignment
A0A059AN92 Uncharacterized protein5.2e-1034.01Show/hide
Query:  PSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG
        PS  P ++   I++       +++EK L   D+ + + RLSI  K +++ FL+EEE + L   E + V+++EP  E    LRL+K     K+  SY LT 
Subjt:  PSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG

Query:  GWYNTVAR--NSDALMRGEFVRVWYFRVNGRLWFGVEVVGEVKRQFE
         W N VA     + LM+   +++W FRV+G LWF +  V    RQ++
Subjt:  GWYNTVAR--NSDALMRGEFVRVWYFRVNGRLWFGVEVVGEVKRQFE

A0A1Q3D1D3 DUF313 domain-containing protein1.5e-0932.48Show/hide
Query:  RESSESSVDEETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSY
        R+ + ++ +E TEP+M        P      I+  +      +++K+L ++DV K+++RL+I  + +K  FL  EE++KLE  E + V V+EP  +  S+
Subjt:  RESSESSVDEETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSY

Query:  LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVEVV
        L L+K     +   SYAL  GW++ V+   + LM+   VR+W FR+   L F + VV
Subjt:  LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVEVV

A0A1Q3DIM2 DUF313 domain-containing protein2.6e-0938.26Show/hide
Query:  LMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVW
        +++K+L ++DV KS++RL+I  + +K  FL  EE++KLE  E + V V+EP  +  S+L L+K     +   SYAL  GW++ V+   + LM+   VR+W
Subjt:  LMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVW

Query:  YFRVNGRLWFGVEVV
         FR+   L F + VV
Subjt:  YFRVNGRLWFGVEVV

A0A6J1DRC9 VID27-like protein1.2e-3338.95Show/hide
Query:  SSSVSSTLNTENSHLNFLAMDVTAAAGETTDDDNVPSSSNESENSEIKTAAEGGKGKIVNTEIEQEATRSQEIEIGKQKVVYTKESASSSAVIVEDRESS
        + SV+  L  E +       +     G+   DD +    +E E  +I T  +    +I +  +E E  +   +E   Q       +AS++A    D++SS
Subjt:  SSSVSSTLNTENSHLNFLAMDVTAAAGETTDDDNVPSSSNESENSEIKTAAEGGKGKIVNTEIEQEATRSQEIEIGKQKVVYTKESASSSAVIVEDRESS

Query:  ESSVDE-ETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRL
        ES  +E ETE Q+  N P NFP  F K + DP SI PRILMEK+LR +DV ++++RLSI  K +KE+FL  +E+ ++ +GE M V V+EPD  TVS + L
Subjt:  ESSVDE-ETEPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRL

Query:  RKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFR-----VNGRLWFGVEVVGEVK-RQFEILEQMSQKWCHENILVP
        R+ R    +  SY LTG W   VARNSDAL RG  VRVWYF      V  RL F +EV    K    E +++++QKW  +NI  P
Subjt:  RKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFR-----VNGRLWFGVEVVGEVK-RQFEILEQMSQKWCHENILVP

B9S7N8 Uncharacterized protein1.4e-1032.85Show/hide
Query:  SNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKE-SFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG
        +N PY   + I+     + +++M K+L + D+    +RLS+    IK+ +FL EEE++KLE  + + V  MEP G   S ++++K   + ++  SYAL  
Subjt:  SNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKE-SFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTG

Query:  GWYNTVARNSDA------LMRGEFVRVWYFRVNGRLW
        GW + VARN             + +++W FRV G LW
Subjt:  GWYNTVARNSDA------LMRGEFVRVWYFRVNGRLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24850.1 Domain of unknown function (DUF313)9.4e-0425.6Show/hide
Query:  VEDRESSESSVDEETEPQMFENLPSNFPYRFAKLIKD-PSSIHPRILMEKRLRRADVRKSKDRLSIT-RKWIKESFLTEEE----KKKLESGEVMGVAVM
        VE+R+ +      +  P  F     + P    K+++D   +   +++ EK L   D+  +++RLS+     ++  FLT  E    K+ + + + +GV  +
Subjt:  VEDRESSESSVDEETEPQMFENLPSNFPYRFAKLIKD-PSSIHPRILMEKRLRRADVRKSKDRLSIT-RKWIKESFLTEEE----KKKLESGEVMGVAVM

Query:  EPDGETVSY----LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVE
          D  +V +     R    +  GK   +Y L  GW + V  N   L  G+ + VW FR  G L F +E
Subjt:  EPDGETVSY----LRLRKLRNKGKEMGSYALTGGWYNTVARNSDALMRGEFVRVWYFRVNGRLWFGVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCTCCTCTGTCAGTTCAACACTCAACACAGAAAATTCTCACCTAAATTTCTTAGCAATGGACGTTACCGCTGCCGCCGGCGAAACAACCGACGACGACAATGT
CCCATCTTCGTCCAACGAATCCGAAAACAGCGAAATAAAAACGGCGGCGGAAGGAGGAAAAGGAAAGATCGTCAACACCGAAATCGAACAAGAAGCAACGCGATCTCAAG
AAATTGAGATCGGAAAACAAAAGGTCGTTTACACGAAAGAATCGGCGTCGTCCTCCGCCGTGATCGTAGAAGATCGAGAATCCTCTGAATCGAGCGTAGACGAAGAAACA
GAGCCACAAATGTTCGAGAACCTTCCTTCGAATTTCCCCTACCGATTCGCGAAACTAATAAAAGATCCGAGCTCGATTCATCCTCGAATTTTGATGGAGAAGCGACTGCG
GAGAGCGGATGTGAGGAAGAGTAAAGATCGACTGTCGATTACGAGGAAGTGGATAAAGGAATCGTTCTTAACGGAGGAGGAAAAGAAGAAGTTGGAATCCGGCGAGGTTA
TGGGAGTGGCGGTGATGGAGCCGGATGGAGAAACGGTGAGTTATCTGAGATTGAGAAAGCTGCGGAACAAAGGTAAGGAGATGGGGTCGTACGCGCTAACCGGAGGGTGG
TATAACACGGTGGCGCGTAACAGTGACGCGCTGATGAGAGGAGAATTTGTTAGGGTTTGGTATTTTCGCGTGAACGGTAGGCTTTGGTTTGGGGTTGAAGTTGTTGGAGA
AGTGAAGAGACAATTTGAAATTTTGGAGCAAATGTCTCAGAAATGGTGTCACGAAAATATTTTGGTTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCTCCTCTGTCAGTTCAACACTCAACACAGAAAATTCTCACCTAAATTTCTTAGCAATGGACGTTACCGCTGCCGCCGGCGAAACAACCGACGACGACAATGT
CCCATCTTCGTCCAACGAATCCGAAAACAGCGAAATAAAAACGGCGGCGGAAGGAGGAAAAGGAAAGATCGTCAACACCGAAATCGAACAAGAAGCAACGCGATCTCAAG
AAATTGAGATCGGAAAACAAAAGGTCGTTTACACGAAAGAATCGGCGTCGTCCTCCGCCGTGATCGTAGAAGATCGAGAATCCTCTGAATCGAGCGTAGACGAAGAAACA
GAGCCACAAATGTTCGAGAACCTTCCTTCGAATTTCCCCTACCGATTCGCGAAACTAATAAAAGATCCGAGCTCGATTCATCCTCGAATTTTGATGGAGAAGCGACTGCG
GAGAGCGGATGTGAGGAAGAGTAAAGATCGACTGTCGATTACGAGGAAGTGGATAAAGGAATCGTTCTTAACGGAGGAGGAAAAGAAGAAGTTGGAATCCGGCGAGGTTA
TGGGAGTGGCGGTGATGGAGCCGGATGGAGAAACGGTGAGTTATCTGAGATTGAGAAAGCTGCGGAACAAAGGTAAGGAGATGGGGTCGTACGCGCTAACCGGAGGGTGG
TATAACACGGTGGCGCGTAACAGTGACGCGCTGATGAGAGGAGAATTTGTTAGGGTTTGGTATTTTCGCGTGAACGGTAGGCTTTGGTTTGGGGTTGAAGTTGTTGGAGA
AGTGAAGAGACAATTTGAAATTTTGGAGCAAATGTCTCAGAAATGGTGTCACGAAAATATTTTGGTTCCTTAA
Protein sequenceShow/hide protein sequence
MQSSSVSSTLNTENSHLNFLAMDVTAAAGETTDDDNVPSSSNESENSEIKTAAEGGKGKIVNTEIEQEATRSQEIEIGKQKVVYTKESASSSAVIVEDRESSESSVDEET
EPQMFENLPSNFPYRFAKLIKDPSSIHPRILMEKRLRRADVRKSKDRLSITRKWIKESFLTEEEKKKLESGEVMGVAVMEPDGETVSYLRLRKLRNKGKEMGSYALTGGW
YNTVARNSDALMRGEFVRVWYFRVNGRLWFGVEVVGEVKRQFEILEQMSQKWCHENILVP