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ClCG04G005660 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G005660
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionHeat shock protein DnaJ with tetratricopeptide repeat
Genome locationCG_Chr04:19462109..19464533
RNA-Seq ExpressionClCG04G005660
SyntenyClCG04G005660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046686.1 Heat shock protein DnaJ with tetratricopeptide repeat isoform 1 [Cucumis melo var. makuwa]7.6e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
XP_004135998.2 uncharacterized protein LOC101222380 [Cucumis sativus]7.6e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
XP_008451491.1 PREDICTED: uncharacterized protein LOC103492765 [Cucumis melo]7.6e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
XP_022953408.1 uncharacterized protein LOC111455971 [Cucurbita moschata]9.9e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
XP_038899800.1 uncharacterized protein LOC120087026 [Benincasa hispida]3.4e-0558.21Show/hide
Query:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        ++ +RE+ A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DSAGS G
Subjt:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
TrEMBL top hitse value%identityAlignment
A0A0A0KB72 Uncharacterized protein3.7e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
A0A1S3BRM9 uncharacterized protein LOC1034927653.7e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
A0A5D3D2R9 Heat shock protein DnaJ with tetratricopeptide repeat isoform 13.7e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
A0A6J1GN95 uncharacterized protein LOC1114559714.8e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
A0A6J1JVR8 uncharacterized protein LOC1114883074.8e-0561.9Show/hide
Query:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        REV A LNLID A A SPR    LELKA A L LR  K VA+MLQD   SFKI   DS GS+G
Subjt:  REVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47440.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.8e-0444.78Show/hide
Query:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
        S    +V + L+L+D A + SPR    LELKA + L+LR  K VA+MLQD   S K+    SA S G
Subjt:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGSNG
AT3G62570.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.3e-0438.57Show/hide
Query:  RPRCNSRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGS
        R    S  + +V + ++L+D A + SPR    LELKA + L+LR  K V +MLQD   S K+   +  GS
Subjt:  RPRCNSRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQDLF-SFKIIYGDSAGS
AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat4.0e-0450Show/hide
Query:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQD
        S+   +V + LNL++ A + SPR    LELKA + LYLR  K VA+MLQD
Subjt:  SRTKREVYATLNLIDVAFAPSPR----LELKAHAFLYLRHLKVVANMLQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACGCCCTCGTTGCAACTCAAGAACAAAGAGAGAAGTTTATGCCACTCTTAATCTTATTGATGTGGCTTTCGCTCCTTCTCCTCGACTTGAACTCAAA
GCTCATGCTTTCCTCTATCTTCGCCACTTGAAAGTTGTTGCCAATATGCTTCAGGATTTATTCAGTTTCAAGATCATCTACGGGGATTCTGCTGGCTCTAATGGT
CACCTCGTCATTGGGAAAACTTTTAGAGATTTGGAAAAGAGGGAGAAGCGATGCTTCCTCATATTCAAGCTCAAAGGTTATGTTGATGCTTCTTCGTCTTCAAGC
TTGGAGGCTTCATTGATATTTCTCCATCTTCAAGCTTGGAGGCTTCATCAATGCTTCTCCATCCTCAAGTATGATGGTTTCGTAGCATCTTCTCCATCTCCAAGC
ACAATGTGCAACTTCGCTACTCTCCAAGCTATTGGTGTAGCTTTGCTCTCTATCCAAAATGTTGGTGCAACTTTGCCTCCTCTCCAAAATGTTGGTGCCCTTCGC
TTCATCTTTGAAATTGTAGCTTTATATCTAAAATGTTGGTGTAGCTTTGCTCGTCTCCAAAATGTTGATGCAGTTTCACCTCCTCTCCAAAATGTTGGTGCAGCT
TCGCTTCTTCTCCAAAATGTTAGTGCAACTTTGCCTCCTCTTCAAACTGTTGGTGCGGCTTCGCTCCCTCTCCAAAATATTGCTTCGCTCCTCCTCAATATTGGT
GCAACTCCACTTTGTCTTCAAGTTCAAGATCGGTGTGGTCGATTCCACTCCAAGTCAAGTTCAAAATCTGCGTGCCCAACATGTCTGCAAGAAGAAGACTTATCA
TTGTTGAACTTGGAGTGCACCAGCATGCCCAACATGTCTGCAAAGAGAAGACTCATCGTCGTTGGAGTTGGAGTGCACCAACGTGCCCAACATATCTGCAAGGAG
AAGACTCATCATCATTGGAGTTGGTACGCTAACTTCACGACAAATGATGGTTCAGAGTGTGACATCCTAAGTTGGTGCGTAAACGATTGTATAGAAGCACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACGCCCTCGTTGCAACTCAAGAACAAAGAGAGAAGTTTATGCCACTCTTAATCTTATTGATGTGGCTTTCGCTCCTTCTCCTCGACTTGAACTCAAA
GCTCATGCTTTCCTCTATCTTCGCCACTTGAAAGTTGTTGCCAATATGCTTCAGGATTTATTCAGTTTCAAGATCATCTACGGGGATTCTGCTGGCTCTAATGGT
CACCTCGTCATTGGGAAAACTTTTAGAGATTTGGAAAAGAGGGAGAAGCGATGCTTCCTCATATTCAAGCTCAAAGGTTATGTTGATGCTTCTTCGTCTTCAAGC
TTGGAGGCTTCATTGATATTTCTCCATCTTCAAGCTTGGAGGCTTCATCAATGCTTCTCCATCCTCAAGTATGATGGTTTCGTAGCATCTTCTCCATCTCCAAGC
ACAATGTGCAACTTCGCTACTCTCCAAGCTATTGGTGTAGCTTTGCTCTCTATCCAAAATGTTGGTGCAACTTTGCCTCCTCTCCAAAATGTTGGTGCCCTTCGC
TTCATCTTTGAAATTGTAGCTTTATATCTAAAATGTTGGTGTAGCTTTGCTCGTCTCCAAAATGTTGATGCAGTTTCACCTCCTCTCCAAAATGTTGGTGCAGCT
TCGCTTCTTCTCCAAAATGTTAGTGCAACTTTGCCTCCTCTTCAAACTGTTGGTGCGGCTTCGCTCCCTCTCCAAAATATTGCTTCGCTCCTCCTCAATATTGGT
GCAACTCCACTTTGTCTTCAAGTTCAAGATCGGTGTGGTCGATTCCACTCCAAGTCAAGTTCAAAATCTGCGTGCCCAACATGTCTGCAAGAAGAAGACTTATCA
TTGTTGAACTTGGAGTGCACCAGCATGCCCAACATGTCTGCAAAGAGAAGACTCATCGTCGTTGGAGTTGGAGTGCACCAACGTGCCCAACATATCTGCAAGGAG
AAGACTCATCATCATTGGAGTTGGTACGCTAACTTCACGACAAATGATGGTTCAGAGTGTGACATCCTAAGTTGGTGCGTAAACGATTGTATAGAAGCACACTAG
Protein sequenceShow/hide protein sequence
MQERPRCNSRTKREVYATLNLIDVAFAPSPRLELKAHAFLYLRHLKVVANMLQDLFSFKIIYGDSAGSNGHLVIGKTFRDLEKREKRCFLIFKLKGYVDASSSSS
LEASLIFLHLQAWRLHQCFSILKYDGFVASSPSPSTMCNFATLQAIGVALLSIQNVGATLPPLQNVGALRFIFEIVALYLKCWCSFARLQNVDAVSPPLQNVGAA
SLLLQNVSATLPPLQTVGAASLPLQNIASLLLNIGATPLCLQVQDRCGRFHSKSSSKSACPTCLQEEDLSLLNLECTSMPNMSAKRRLIVVGVGVHQRAQHICKE
KTHHHWSWYANFTTNDGSECDILSWCVNDCIEAH