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ClCG04G005860 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G005860
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:20035823..20036377
RNA-Seq ExpressionClCG04G005860
SyntenyClCG04G005860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54678.1 hypothetical protein Csa_012366 [Cucumis sativus]3.1e-2152.85Show/hide
Query:  KLQFL-LFFLVAILSIFLL-SLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEG
        KLQ L LFF V+I+SI LL S EVDGRKSLLQKE R+D++KLVK+ST LD DFHGEMV  +Q KK+PTDLED P DQ+GE+SE ++    EE +P  +EG
Subjt:  KLQFL-LFFLVAILSIFLL-SLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEG

Query:  EYGR----GTPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN
        EYG     G  G+  G+   G GG+        GE+  GDDDG              ESGE  E  DGGESGEE     NGE+ S E  PGDN
Subjt:  EYGR----GTPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN

TYK09628.1 hypothetical protein E5676_scaffold447G00230 [Cucumis melo var. makuwa]2.1e-2254.5Show/hide
Query:  KLQFLLFFLVAI-LSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYG
        KLQ LLFF V+I +SI L+S +VDGRKSLLQKE R+D +KLV++ST LD DFHGEMV N+Q KK+PTDLED P DQ+GE+SE E G EE +P  +EGE  
Subjt:  KLQFLLFFLVAI-LSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYG

Query:  R-GTPGEESG--EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN
          G  G ESG  E   GD G+ GE            GDDDG             ESGE  E   GG SGEE    NNGEDS E  PGDN
Subjt:  R-GTPGEESG--EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN

XP_038882385.1 spore wall protein 2-like [Benincasa hispida]5.9e-4165.98Show/hide
Query:  MKLQFLLFFLVAILSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVA-NHQMKKIPTDLEDPVDQEGESSEGEDGLEEGIPAGDEGEYG
        MKLQ L     AILSIFLLSLEVDGRKSLLQKE+RE+ +KL K+ST+LD DFHG+MVA NHQMKK PTDLED  +QE ESSEG++GLEEGIP GDEGEYG
Subjt:  MKLQFLLFFLVAILSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVA-NHQMKKIPTDLEDPVDQEGESSEGEDGLEEGIPAGDEGEYG

Query:  RGTPGEESGEVPE---GDGGEHGEYVPGDDDGES------GEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG
        RGTP  ESGEVPE    +GG+  E  PGDD GES      G+G + DD GES E D G+ G D G M   DNQ +SRG+ GD DIV DD DKRG
Subjt:  RGTPGEESGEVPE---GDGGEHGEYVPGDDDGES------GEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG

TrEMBL top hitse value%identityAlignment
A0A0A0KYS7 Uncharacterized protein1.5e-2152.85Show/hide
Query:  KLQFL-LFFLVAILSIFLL-SLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEG
        KLQ L LFF V+I+SI LL S EVDGRKSLLQKE R+D++KLVK+ST LD DFHGEMV  +Q KK+PTDLED P DQ+GE+SE ++    EE +P  +EG
Subjt:  KLQFL-LFFLVAILSIFLL-SLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGED--GLEEGIPAGDEG

Query:  EYGR----GTPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN
        EYG     G  G+  G+   G GG+        GE+  GDDDG              ESGE  E  DGGESGEE     NGE+ S E  PGDN
Subjt:  EYGR----GTPGEESGEVPEGDGGEH-------GEYVPGDDDG--------------ESGEGVEGDDGGESGEE-DTGNNGED-SGEMEPGDN

A0A5D3CEH4 Uncharacterized protein1.0e-2254.5Show/hide
Query:  KLQFLLFFLVAI-LSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYG
        KLQ LLFF V+I +SI L+S +VDGRKSLLQKE R+D +KLV++ST LD DFHGEMV N+Q KK+PTDLED P DQ+GE+SE E G EE +P  +EGE  
Subjt:  KLQFLLFFLVAI-LSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLED-PVDQEGESSEGEDGLEEGIPAGDEGEYG

Query:  R-GTPGEESG--EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN
          G  G ESG  E   GD G+ GE            GDDDG             ESGE  E   GG SGEE    NNGEDS E  PGDN
Subjt:  R-GTPGEESG--EVPEGDGGEHGEYVP---------GDDDG-------------ESGEGVEGDDGGESGEE-DTGNNGEDSGEMEPGDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGCAGTTTCTTCTCTTCTTTTTGGTTGCCATCCTTTCCATCTTTCTGCTTTCTCTAGAAGTTGATGGAAGAAAGTCTTTACTTCAAAAAGAAAATAGG
GAAGACTACTCTAAGCTTGTCAAGAAAAGTACTCTTTTAGATGGAGATTTTCATGGTGAAATGGTGGCTAATCATCAAATGAAAAAAATTCCAACTGATTTAGAA
GATCCTGTGGATCAAGAGGGCGAAAGTTCCGAAGGTGAAGACGGATTAGAGGAAGGCATTCCTGCTGGCGACGAAGGAGAATATGGAAGAGGAACTCCTGGAGAA
GAATCTGGAGAAGTTCCTGAAGGTGATGGAGGAGAACATGGAGAATATGTCCCTGGAGATGACGACGGAGAATCTGGCGAAGGGGTCGAAGGCGATGACGGAGGC
GAATCTGGAGAAGAGGATACTGGTAACAATGGAGAAGATTCTGGAGAAATGGAACCTGGAGACAACCAAGAAAAATCTAGAGGCAACGATGGAGATGGAGATATT
GTAAGTGATGATGAAGATAAAAGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTGCAGTTTCTTCTCTTCTTTTTGGTTGCCATCCTTTCCATCTTTCTGCTTTCTCTAGAAGTTGATGGAAGAAAGTCTTTACTTCAAAAAGAAAATAGG
GAAGACTACTCTAAGCTTGTCAAGAAAAGTACTCTTTTAGATGGAGATTTTCATGGTGAAATGGTGGCTAATCATCAAATGAAAAAAATTCCAACTGATTTAGAA
GATCCTGTGGATCAAGAGGGCGAAAGTTCCGAAGGTGAAGACGGATTAGAGGAAGGCATTCCTGCTGGCGACGAAGGAGAATATGGAAGAGGAACTCCTGGAGAA
GAATCTGGAGAAGTTCCTGAAGGTGATGGAGGAGAACATGGAGAATATGTCCCTGGAGATGACGACGGAGAATCTGGCGAAGGGGTCGAAGGCGATGACGGAGGC
GAATCTGGAGAAGAGGATACTGGTAACAATGGAGAAGATTCTGGAGAAATGGAACCTGGAGACAACCAAGAAAAATCTAGAGGCAACGATGGAGATGGAGATATT
GTAAGTGATGATGAAGATAAAAGGGGGTGA
Protein sequenceShow/hide protein sequence
MKLQFLLFFLVAILSIFLLSLEVDGRKSLLQKENREDYSKLVKKSTLLDGDFHGEMVANHQMKKIPTDLEDPVDQEGESSEGEDGLEEGIPAGDEGEYGRGTPGE
ESGEVPEGDGGEHGEYVPGDDDGESGEGVEGDDGGESGEEDTGNNGEDSGEMEPGDNQEKSRGNDGDGDIVSDDEDKRG