; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G006280 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G006280
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptiontRNA_int_end_N2 domain-containing protein
Genome locationCG_Chr04:20762615..20769546
RNA-Seq ExpressionClCG04G006280
SyntenyClCG04G006280
Gene Ontology termsGO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000214 - tRNA-intron endonuclease complex (cellular component)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal
IPR024337 - tRNA-splicing endonuclease, subunit Sen54


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596967.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]3.8e-12482.02Show/hide
Query:  FLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL
        FLMEATDWE SSGGAS D+ N+EQDI +EEECL +SG        KHASTARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL LL
Subjt:  FLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL

Query:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF
        D DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGK+KVPWS+K  RNG DISS SSIENKG++D  SEDE+SI EL+DAIQL+EVTPIFDV+
Subjt:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF

Query:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPH++FRKSSPGDPNFMVCLTRGYPP K DIE++ER S GIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_011653726.1 uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus]1.0e-12987.64Show/hide
Query:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL
        MEAT+WESSSGGAS  GDE NYEQDINDEEECL  SG        KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL LL
Subjt:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL

Query:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF
        D DNSSLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGK++VPWSLKNVRN  DISSPSS ENKGASDVKS+DE+SI  LL+AIQLDEVTPIFDVF
Subjt:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF

Query:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPHN+FRKSSPGDPNFMVCLTRGYPPSKE+IE+LERTSRGIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]1.7e-12483.4Show/hide
Query:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD
        MEATDWESSSGGASGD+  YEQD+ DEEECL  SG        KHASTARWNDQMGMAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGAL LLD 
Subjt:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP
        DNSSLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGK+KVPWS+K VRNGSDIS  SSIEN+GA D++S+DERSISELL +IQLD+V PIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP

Query:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H++FRKSSPGDPNFMVCLTRGYPP K+DIE LERTSRGI +KYCHVEHGRVCFFSFDK+ELP+LP
Subjt:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_022973337.1 tRNA-splicing endonuclease subunit Sen54 isoform X1 [Cucurbita maxima]1.9e-12380.15Show/hide
Query:  SDFFWFLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVG
        S F  FLMEATDWE SSGGAS D+ N+EQDI +EEECL +SG        KHASTARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVG
Subjt:  SDFFWFLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVG

Query:  ALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTP
        AL LLD DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGK+KVPWS+K  RNG DISS SSIENKG++D +SEDE+SI ELL+A+QL+E+TP
Subjt:  ALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTP

Query:  IFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        IFDV+LPH++FRKSSPGDPNFMVCLTRGYPP K DIE++ER S GIPMKYCHVEHGRVCFFSFDKV+LP+LP
Subjt:  IFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_038883355.1 uncharacterized protein LOC120074337 [Benincasa hispida]7.8e-13087.17Show/hide
Query:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD
        MEA DWESSSGGASGDE NYE+DIN+EEECL  SG        KHASTARWND+MGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL LLD 
Subjt:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP
        DNSSLSL+DVYKK+AEGK+GCLWEQFEVYRHLKSLGFIVGK+KVPWSLK+VR+GS+ISSPSSIENKGASDVKSEDERSISELLD IQL+EV PIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP

Query:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        HN+FRKSSPGDPNFMV LTRGYPPSK+D+E+L RTSRGIPMKYCHVEHGRVCFFSFD VELPILP
Subjt:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

TrEMBL top hitse value%identityAlignment
A0A0A0KXV5 tRNA_int_end_N2 domain-containing protein4.9e-13087.64Show/hide
Query:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL
        MEAT+WESSSGGAS  GDE NYEQDINDEEECL  SG        KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL LL
Subjt:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL

Query:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF
        D DNSSLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGK++VPWSLKNVRN  DISSPSS ENKGASDVKS+DE+SI  LL+AIQLDEVTPIFDVF
Subjt:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF

Query:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPHN+FRKSSPGDPNFMVCLTRGYPPSKE+IE+LERTSRGIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A1S4E447 uncharacterized protein LOC1035014742.0e-12385.38Show/hide
Query:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTS--------GKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL
        MEAT+W+SSSGGAS  GDE NYEQDINDEEECL  S         KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYC+IEETLFLIEVGAL LL
Subjt:  MEATDWESSSGGAS--GDEGNYEQDINDEEECLYTS--------GKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL

Query:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF
        D DNS+LSLKDVYKKVAEG+SGC+WEQFEVYRHLKSLG+IVGK+KVPWSLKNVRN  D+SSPSS E KG SDVKSEDE+ IS LL+AIQLDEVTPIFDVF
Subjt:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF

Query:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDK
        LPHN+FRKSSPGDPNFMVCL RGYPPSKE+IE+LERTSRGIPMKYCHVEHGRVCFFSFDK
Subjt:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDK

A0A6J1DRN3 uncharacterized protein LOC1110236608.2e-12583.4Show/hide
Query:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD
        MEATDWESSSGGASGD+  YEQD+ DEEECL  SG        KHASTARWNDQMGMAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGAL LLD 
Subjt:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDD

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP
        DNSSLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGK+KVPWS+K VRNGSDIS  SSIEN+GA D++S+DERSISELL +IQLD+V PIFDVFLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLP

Query:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H++FRKSSPGDPNFMVCLTRGYPP K+DIE LERTSRGI +KYCHVEHGRVCFFSFDK+ELP+LP
Subjt:  HNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A6J1I794 tRNA-splicing endonuclease subunit Sen54 isoform X19.0e-12480.15Show/hide
Query:  SDFFWFLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVG
        S F  FLMEATDWE SSGGAS D+ N+EQDI +EEECL +SG        KHASTARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVG
Subjt:  SDFFWFLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVG

Query:  ALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTP
        AL LLD DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGK+KVPWS+K  RNG DISS SSIENKG++D +SEDE+SI ELL+A+QL+E+TP
Subjt:  ALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTP

Query:  IFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        IFDV+LPH++FRKSSPGDPNFMVCLTRGYPP K DIE++ER S GIPMKYCHVEHGRVCFFSFDKV+LP+LP
Subjt:  IFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A6J1ICR8 tRNA-splicing endonuclease subunit Sen54 isoform X22.0e-12380.9Show/hide
Query:  FLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL
        FLMEATDWE SSGGAS D+ N+EQDI +EEECL +SG        KHASTARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL LL
Subjt:  FLMEATDWESSSGGASGDEGNYEQDINDEEECLYTSG--------KHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL

Query:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF
        D DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGK+KVPWS+K  RNG DISS SSIENKG++D +SEDE+SI ELL+A+QL+E+TPIFDV+
Subjt:  DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVF

Query:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPH++FRKSSPGDPNFMVCLTRGYPP K DIE++ER S GIPMKYCHVEHGRVCFFSFDKV+LP+LP
Subjt:  LPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

SwissProt top hitse value%identityAlignment
O74908 Probable tRNA-splicing endonuclease subunit sen548.7e-0735.85Show/hide
Query:  SGKHASTARWNDQMGMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF-IV
        S KHA  A WN Q GM+ V +  G L+ T G      +++   EETL+L+E G++    ++   +SL+ VY   +    G L E + VY HL+  GF ++
Subjt:  SGKHASTARWNDQMGMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF-IV

Query:  GKNKVP
          N VP
Subjt:  GKNKVP

Q74ZJ5 tRNA-splicing endonuclease subunit SEN546.9e-0432.35Show/hide
Query:  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVG------ALRLLDDDNSS----LSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF
        A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G      AL + D+ ++     LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVG------ALRLLDDDNSS----LSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hitse value%identityAlignment
AT3G02370.1 unknown protein7.2e-4147.56Show/hide
Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L+LL D+D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G++ VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGS

Query:  DISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLPHNRFRKSSPGDPNFMVCLT
          ++PS  +    +    +D  S+++LL  + + +  P+FDV+LP+++F+KSSPG+P+F+ C +
Subjt:  DISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLPHNRFRKSSPGDPNFMVCLT

AT3G02370.2 unknown protein1.8e-4448Show/hide
Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L+LL D+D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G++ VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-DDDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGS

Query:  DISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIE
          ++PS  +    +    +D  S+++LL  + + +  P+FDV+LP+++F+KSSPG+P+F+ C +   PPSKE+I+
Subjt:  DISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIE

AT3G57360.1 unknown protein1.8e-6043.4Show/hide
Query:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSGK--------HASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-D
        ME  DWE+SS  +S +EG +    ND++E  ++ G          +S ARW  ++GMAEV   +G LWTTTGI+R GK YC IEE L+L E+G L++L +
Subjt:  MEATDWESSSGGASGDEGNYEQDINDEEECLYTSGK--------HASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLL-D

Query:  DDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFL
        +D+  + LKD+Y+K+AE KSGC WE +EVYR+LK LG+I+G++ V W+LK      D + P+  E    +     D  ++++LL  +Q+ +   +FDV+L
Subjt:  DDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFL

Query:  PHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPIL
        P++RF+KSSPG+P+F+ C +   PPSKEDI++L++     P+ +CH+  GR  FFSF  ++LP+L
Subjt:  PHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERTSRGIPMKYCHVEHGRVCFFSFDKVELPIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGAGGAGGCTCAGTGCTTATCTCCTTGAGAAGGCTCGTGAGTTTCCCCGGGACCCAGTACTCAAGGACATGAGAAGGTACATGGGCAACTCGTCATATTCCTA
TGTGCACATAGAGGTTAATCTGGCTAGTGCATCGAGCTTGCTCTGCTTGAAGCCAGGGATGATTTCGACGTTGGGTGTGTTGAGCCTTGCTCCACCCCAACTAAGGATGT
TTTCGACGTTGAGAGCGTTGAGTCTTACTCCGCCTCAACTAAGGGAAATGATTGAGAAACCAAAACGAGTAGCAAGCGAGTTCGGGATGCTGTGCCTACGCAAGAACCTC
GTCTGGGCCGTCTTTGGTAAAGAAATGGTTGTCACACACACACTCTCTCCCGCATTCCTCTACGCTCCCCCGTTCGCGCCGCCTAGTTCCGTCGCCATCCGCCTTGACCA
GGCCAACTGCGGCGCCACCAGTGAACCTGGTCGCACCGTCACTGCAAGTTCCCCGGACTTCCGGCCGTCGCTACTTCTTCCGCCATCGCCCAGCCACTTCCAGACCAACG
CCGGTGAGCGTTTTGTGACGTTTCGTTTTAGGGGTTTAGCGTGCTGTCCAGCAGTGCTTAAGGACGTTTCCGACTTTTTCTGGTTTTTGATGGAGGCTACGGATTGGGAA
AGTTCTTCAGGAGGAGCTAGTGGTGATGAAGGCAATTACGAACAAGACATAAACGACGAAGAAGAATGTCTCTACACATCTGGGAAGCATGCTTCAACTGCTCGATGGAA
TGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACAACAACTGGCATTGTACGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTC
TTATTGAAGTTGGGGCCCTACGTCTTTTGGATGATGATAATTCAAGTCTTTCTTTGAAAGATGTATATAAGAAAGTAGCTGAAGGAAAAAGTGGGTGTCTTTGGGAGCAG
TTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGAATAAAGTTCCTTGGTCTCTGAAGAATGTTAGGAATGGCAGTGACATTTCATCTCCAAGTTC
TATTGAAAACAAAGGAGCATCAGATGTCAAATCAGAAGACGAGAGGTCGATTTCCGAACTATTAGATGCCATTCAGCTCGATGAAGTAACACCCATTTTTGATGTTTTTC
TTCCACATAACAGATTTAGAAAGTCTTCTCCTGGTGATCCAAATTTTATGGTCTGCTTGACTCGGGGATATCCACCTTCAAAAGAAGATATTGAAATTCTTGAGAGAACA
TCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGAGTCTGCTTCTTTTCATTTGATAAGGTGGAACTCCCTATCTTACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGAGGAGGCTCAGTGCTTATCTCCTTGAGAAGGCTCGTGAGTTTCCCCGGGACCCAGTACTCAAGGACATGAGAAGGTACATGGGCAACTCGTCATATTCCTA
TGTGCACATAGAGGTTAATCTGGCTAGTGCATCGAGCTTGCTCTGCTTGAAGCCAGGGATGATTTCGACGTTGGGTGTGTTGAGCCTTGCTCCACCCCAACTAAGGATGT
TTTCGACGTTGAGAGCGTTGAGTCTTACTCCGCCTCAACTAAGGGAAATGATTGAGAAACCAAAACGAGTAGCAAGCGAGTTCGGGATGCTGTGCCTACGCAAGAACCTC
GTCTGGGCCGTCTTTGGTAAAGAAATGGTTGTCACACACACACTCTCTCCCGCATTCCTCTACGCTCCCCCGTTCGCGCCGCCTAGTTCCGTCGCCATCCGCCTTGACCA
GGCCAACTGCGGCGCCACCAGTGAACCTGGTCGCACCGTCACTGCAAGTTCCCCGGACTTCCGGCCGTCGCTACTTCTTCCGCCATCGCCCAGCCACTTCCAGACCAACG
CCGGTGAGCGTTTTGTGACGTTTCGTTTTAGGGGTTTAGCGTGCTGTCCAGCAGTGCTTAAGGACGTTTCCGACTTTTTCTGGTTTTTGATGGAGGCTACGGATTGGGAA
AGTTCTTCAGGAGGAGCTAGTGGTGATGAAGGCAATTACGAACAAGACATAAACGACGAAGAAGAATGTCTCTACACATCTGGGAAGCATGCTTCAACTGCTCGATGGAA
TGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACAACAACTGGCATTGTACGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTC
TTATTGAAGTTGGGGCCCTACGTCTTTTGGATGATGATAATTCAAGTCTTTCTTTGAAAGATGTATATAAGAAAGTAGCTGAAGGAAAAAGTGGGTGTCTTTGGGAGCAG
TTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGAATAAAGTTCCTTGGTCTCTGAAGAATGTTAGGAATGGCAGTGACATTTCATCTCCAAGTTC
TATTGAAAACAAAGGAGCATCAGATGTCAAATCAGAAGACGAGAGGTCGATTTCCGAACTATTAGATGCCATTCAGCTCGATGAAGTAACACCCATTTTTGATGTTTTTC
TTCCACATAACAGATTTAGAAAGTCTTCTCCTGGTGATCCAAATTTTATGGTCTGCTTGACTCGGGGATATCCACCTTCAAAAGAAGATATTGAAATTCTTGAGAGAACA
TCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGAGTCTGCTTCTTTTCATTTGATAAGGTGGAACTCCCTATCTTACCTTAG
Protein sequenceShow/hide protein sequence
MFKRRLSAYLLEKAREFPRDPVLKDMRRYMGNSSYSYVHIEVNLASASSLLCLKPGMISTLGVLSLAPPQLRMFSTLRALSLTPPQLREMIEKPKRVASEFGMLCLRKNL
VWAVFGKEMVVTHTLSPAFLYAPPFAPPSSVAIRLDQANCGATSEPGRTVTASSPDFRPSLLLPPSPSHFQTNAGERFVTFRFRGLACCPAVLKDVSDFFWFLMEATDWE
SSSGGASGDEGNYEQDINDEEECLYTSGKHASTARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLLDDDNSSLSLKDVYKKVAEGKSGCLWEQ
FEVYRHLKSLGFIVGKNKVPWSLKNVRNGSDISSPSSIENKGASDVKSEDERSISELLDAIQLDEVTPIFDVFLPHNRFRKSSPGDPNFMVCLTRGYPPSKEDIEILERT
SRGIPMKYCHVEHGRVCFFSFDKVELPILP