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ClCG04G007100 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G007100
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationCG_Chr04:22077488..22080367
RNA-Seq ExpressionClCG04G007100
SyntenyClCG04G007100
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26636.1 putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]1.5e-3738.65Show/hide
Query:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG------------------------------------
        MKGS    LF+ +V+V IS LKKDVVSQ+   FD NYVVTSSQDHV+RL GGTE QL+LDQAGG                                    
Subjt:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG------------------------------------

Query:  ----------------------------------------------------------------------------KHM-------------------DG
                                                                                    K++                   +G
Subjt:  ----------------------------------------------------------------------------KHM-------------------DG

Query:  EAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC
        E WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRKYVYD YC +PRG+ Y+EC
Subjt:  EAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC

KAG6590076.1 putative xyloglucan endotransglucosylase/hydrolase protein 1, partial [Cucurbita argyrosperma subsp. sororia]9.8e-3444.39Show/hide
Query:  ILKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQA----------------------------------------------------------
        I+   VV ++  FD+NY VT SQDH VRL GG+E+QLSLDQA                                                          
Subjt:  ILKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQA----------------------------------------------------------

Query:  ---GGKH-----------MDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-
           GG++            +GEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR YVY  YCS P GR+ 
Subjt:  ---GGKH-----------MDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-

Query:  YKECQ
        YKECQ
Subjt:  YKECQ

KAG7023744.1 putative xyloglucan endotransglucosylase/hydrolase protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-3239.66Show/hide
Query:  VVVVSISILKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQA---------------------------------------------------
        +V++ + I+   VV ++  FD+NY VT SQDH VRL GG+E+QLSLDQA                                                   
Subjt:  VVVVSISILKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQA---------------------------------------------------

Query:  ------------------------------GGKH-----------MDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNP
                                      GG++            +GEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP
Subjt:  ------------------------------GGKH-----------MDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNP

Query:  KQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ
        +QQ+ YEDVKR YVY  YCS P GR+ YKECQ
Subjt:  KQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ

XP_022961348.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita moschata]1.1e-2971.11Show/hide
Query:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ
        G   +GEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR YVY  YCS P GR+ YKECQ
Subjt:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ

XP_031740431.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus]6.5e-3839.15Show/hide
Query:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG---------------------------------KHM
        MKGS    LF+ +V+V IS LKKDVVSQ+   FD NYVVTSSQDHV+RL GGTE QL+LDQAGG                                  H 
Subjt:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG---------------------------------KHM

Query:  D-------------------------------------------------------------------------------------------------GE
        D                                                                                                 GE
Subjt:  D-------------------------------------------------------------------------------------------------GE

Query:  AWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC
         WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRKYVYD YC +PRG+ Y+EC
Subjt:  AWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC

TrEMBL top hitse value%identityAlignment
A0A0A0KXI7 GH16 domain-containing protein4.1e-3839.49Show/hide
Query:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG----------------------------KHMD----
        MKGS    LF+ +V+V IS LKKDVVSQ+   FD NYVV SSQDHV+RL GGTE QL+LDQAGG                             H D    
Subjt:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG----------------------------KHMD----

Query:  ---------------------------------------------------------------------------------------------GEAWASQ
                                                                                                     GE WAS 
Subjt:  ---------------------------------------------------------------------------------------------GEAWASQ

Query:  GKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC
        G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRKYVYD YC +PRG+ Y+EC
Subjt:  GKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC

A0A6J1JA91 xyloglucan endotransglucosylase/hydrolase protein 2-like5.4e-3071.11Show/hide
Query:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ
        G   +GEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR YVY  YCS P GR+ YKECQ
Subjt:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ

A0A6J1JA91 xyloglucan endotransglucosylase/hydrolase protein 2-like3.3e-0354.55Show/hide
Query:  FVSVVVVSISI-LKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG
        F  ++V+ I I +K  VV ++  FD+NY +T SQDH VRL GG+E+QLSLDQA G
Subjt:  FVSVVVVSISI-LKKDVVSQQ--FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG

A0A6J1JA91 xyloglucan endotransglucosylase/hydrolase protein 2-like5.4e-3071.11Show/hide
Query:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ
        G   +GEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR YVY  YCS P GR+ YKECQ
Subjt:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ

N0DX41 Putative xyloglucan endotransglucosylase/hydrolase7.0e-3838.65Show/hide
Query:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG------------------------------------
        MKGS    LF+ +V+V IS LKKDVVSQ+   FD NYVVTSSQDHV+RL GGTE QL+LDQAGG                                    
Subjt:  MKGSKMSKLFVSVVVVSISILKKDVVSQQ---FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGG------------------------------------

Query:  ----------------------------------------------------------------------------KHM-------------------DG
                                                                                    K++                   +G
Subjt:  ----------------------------------------------------------------------------KHM-------------------DG

Query:  EAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC
        E WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRKYVYD YC +PRG+ Y+EC
Subjt:  EAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKEC

N0DX90 Putative xyloglucan endotransglucosylase/hydrolase1.5e-2458.89Show/hide
Query:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ
        G   +GEAWAS GKKVDWSQ PFQA+Y+GF ILGC  G+ CDS++F WN+ + W+LNP Q++ Y+ +K KY+Y  YCS P   Q YKECQ
Subjt:  GKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQ-YKECQ

SwissProt top hitse value%identityAlignment
Q41638 Xyloglucan endotransglucosylase/hydrolase protein A9.9e-0536.25Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        + + WA++G  +K DWS+APF A+YKGF I GC        CD++    W++ +  +L+  Q Q    V+ KY    YC+
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

Q9LJR7 Xyloglucan endotransglucosylase/hydrolase protein 33.6e-0732.93Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +G+ WA+ G   KV+WS +PF A+++ F + GC    +      C+S  + WN  +   L+  +Q+ YE V+ KY+   YC+
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

Q9M0D2 Probable xyloglucan endotransglucosylase/hydrolase protein 182.2e-0432.93Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPR
        + E WA++G  +K DWS+APF A Y+ + + GC + N    C + + SW  +   +L+   Q   + V+ KY+   YC+  R
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPR

Q9SV60 Xyloglucan endotransglucosylase/hydrolase protein 21.1e-0837.8Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +GE WA+ G  +K++W+ APF+A Y+GF   GC    Q      C S  + WN R   +L+  +Q+  E+V+ KY+   YCS
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

Q9SV61 Putative xyloglucan endotransglucosylase/hydrolase protein 13.0e-0939.24Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +GE WA+ G   K++WS APF+AN++GF   GC      N C S  + WN     +L+  +Q+ Y +V++KY+   YCS
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

Arabidopsis top hitse value%identityAlignment
AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 32.6e-0832.93Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +G+ WA+ G   KV+WS +PF A+++ F + GC    +      C+S  + WN  +   L+  +Q+ YE V+ KY+   YC+
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 12.1e-1039.24Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +GE WA+ G   K++WS APF+AN++GF   GC      N C S  + WN     +L+  +Q+ Y +V++KY+   YCS
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 15.0e-0450Show/hide
Query:  FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGGKHMDGE
        FDDNYVVT  Q++V++L  G E+QLSLD + G   + +
Subjt:  FDDNYVVTSSQDHVVRLTGGTELQLSLDQAGGKHMDGE

AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 28.0e-1037.8Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS
        +GE WA+ G  +K++W+ APF+A Y+GF   GC    Q      C S  + WN R   +L+  +Q+  E+V+ KY+   YCS
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCS

AT4G30280.1 xyloglucan endotransglucosylase/hydrolase 181.6e-0532.93Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPR
        + E WA++G  +K DWS+APF A Y+ + + GC + N    C + + SW  +   +L+   Q   + V+ KY+   YC+  R
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDIYCSTPR

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein2.0e-0533.33Show/hide
Query:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKW---ELNPKQQQTYEDVKRKYVYDIYCST----PRGRQYKEC
        + + WA++G   K DWS+APF A+Y+GF    C + N    C + +        W   EL+   QQ    V+R Y+   YC+     P+G   KEC
Subjt:  DGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKW---ELNPKQQQTYEDVKRKYVYDIYCST----PRGRQYKEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGTCTAAAATGAGCAAGCTTTTTGTTTCTGTTGTTGTTGTGTCTATAAGCATTTTGAAGAAGGATGTTGTTAGCCAACAATTCGATGATAATTATGTTGTTAC
GTCTAGCCAAGATCATGTTGTTCGGTTAACAGGTGGAACAGAACTTCAACTTTCTCTCGATCAAGCTGGAGGGAAGCATATGGATGGAGAAGCATGGGCATCACAAGGCA
AGAAAGTAGATTGGTCTCAAGCTCCATTTCAAGCAAATTACAAAGGCTTTGGCATTCTTGGTTGCACATTTGGAAACCAATGTGACTCAGAGACATTTTCATGGAATAGA
AGAGATAAGTGGGAATTGAATCCCAAACAACAACAAACTTATGAGGATGTGAAGAGAAAATATGTATATGATATCTATTGTTCAACTCCAAGGGGAAGGCAATATAAAGA
ATGCCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGTCTAAAATGAGCAAGCTTTTTGTTTCTGTTGTTGTTGTGTCTATAAGCATTTTGAAGAAGGATGTTGTTAGCCAACAATTCGATGATAATTATGTTGTTAC
GTCTAGCCAAGATCATGTTGTTCGGTTAACAGGTGGAACAGAACTTCAACTTTCTCTCGATCAAGCTGGAGGGAAGCATATGGATGGAGAAGCATGGGCATCACAAGGCA
AGAAAGTAGATTGGTCTCAAGCTCCATTTCAAGCAAATTACAAAGGCTTTGGCATTCTTGGTTGCACATTTGGAAACCAATGTGACTCAGAGACATTTTCATGGAATAGA
AGAGATAAGTGGGAATTGAATCCCAAACAACAACAAACTTATGAGGATGTGAAGAGAAAATATGTATATGATATCTATTGTTCAACTCCAAGGGGAAGGCAATATAAAGA
ATGCCAAGTTTGA
Protein sequenceShow/hide protein sequence
MKGSKMSKLFVSVVVVSISILKKDVVSQQFDDNYVVTSSQDHVVRLTGGTELQLSLDQAGGKHMDGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNR
RDKWELNPKQQQTYEDVKRKYVYDIYCSTPRGRQYKECQV