; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G007440 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G007440
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionsignal recognition particle 19 kDa protein
Genome locationCG_Chr04:22421456..22426150
RNA-Seq ExpressionClCG04G007440
SyntenyClCG04G007440
Gene Ontology termsGO:0006617 - SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]2.1e-6797.04Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTCVEIGDCC HLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPASSSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]2.1e-6494.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]2.1e-6797.04Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTCVEIGDCC HLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPASSSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]7.4e-6594.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]1.1e-6596.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein1.0e-6494.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein3.6e-6594.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein3.0e-6494.12Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSK-GKSGRKKK
        AELVPRHPGRTKKQEPA SSSTAGPSK GK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSK-GKSGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein1.8e-6494.07Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGR KKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein1.4e-6494.81Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSK CENPTC EIGDCCSHLKLPF IEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK
        AELVPRHPGR KKQEPA SSSTAGPSKGK GRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKSGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein4.7e-2248.85Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SK  ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGP-SKGKSGRKKK
        +   RT+K   A  S   G  SK   G+KKK
Subjt:  RHPGRTKKQEPASSSSTAGP-SKGKSGRKKK

P49964 Signal recognition particle 19 kDa protein8.5e-4871.32Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR
        +IK+W V+YP+Y+NSKKT+AEGRRI   K C +PTCVEI DCCSHLK+P  IE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSSTAGPSKGKSGRKKK
        H GRTKKQEPA +SSTAG SKGK G+KKK
Subjt:  HPGRTKKQEPASSSSTAGPSKGKSGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein4.7e-2248.85Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SK  ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGP-SKGKSGRKKK
        +   RT+K   A  S   G  SK   G+KKK
Subjt:  RHPGRTKKQEPASSSSTAGP-SKGKSGRKKK

Q943Z6 Signal recognition particle 19 kDa protein2.0e-4968.28Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK CENP C+EI DCC HLKLP  +EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKSGRKKK
        AELVPRHP R         KKQEP +++ST+G S   GK G+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKSGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein1.0e-2148.48Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SK  ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML +AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASS--SSTAGPSKGKSGRKKK
        +   RT+K   A        G  KGK G+KKK
Subjt:  RHPGRTKKQEPASS--SSTAGPSKGKSGRKKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative1.4e-5068.28Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK CENP C+EI DCC HLKLP  +EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKSGRKKK
        AELVPRHP R         KKQEP +++ST+G S   GK G+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKSGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAGATTCCCAACATAAAGAGATGGGTAGTATTGTATCCCATCTATATTAATTCAAAGAAGACAATTGCTGAAGGAAGACGTATAGGTGTTAGCAAA
GGATGTGAGAATCCTACGTGTGTTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCTTTTACTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAA
AGAGGGAGAGTGCGTGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCT
AGACATCCTGGGAGGACAAAGAAGCAGGAACCTGCATCATCATCATCAACCGCAGGACCTTCAAAAGGCAAGAGTGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
CTTCTATCTGTCTCTCAGTTTCATTCGCTGTCATCTCTCCGTCTCACCCCTCTCTCTCTGTTCAATCTCACTGACAGTCACTCTCTCTCGTCTCCCCCACCCCCT
TTCAGTTTCAGTCACAGCCACACCACACTACCACAGTCTCTCTCTGATCTCCATTTCTCTCCGACAGTCACGGTCTCGGCTGTTCTTCAGTGTGTGAGGAATTTG
GTTAGAATATGGATGGAGAGATTCCCAACATAAAGAGATGGGTAGTATTGTATCCCATCTATATTAATTCAAAGAAGACAATTGCTGAAGGAAGACGTATAGGTG
TTAGCAAAGGATGTGAGAATCCTACGTGTGTTGAGATTGGGGATTGCTGCAGTCATCTCAAACTGCCTTTTACTATTGAGATTGATAAAGCTTATCCTCGTGATT
TCATGCAAAGAGGGAGAGTGCGTGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAAC
TTGTTCCTAGACATCCTGGGAGGACAAAGAAGCAGGAACCTGCATCATCATCATCAACCGCAGGACCTTCAAAAGGCAAGAGTGGAAGAAAGAAGAAATAGTTGC
ATTTATGTAATTGCAAGAACCAAATTGTTATTGACCAGGCTGCTTCAGAACTTTGGAAATCATAGGTTTTGAAAAGGTCAAATTTTTCATCATCGGATTGTTCAA
CATTAGGAGGTGGTGCTGTTCATGGTGCACAGATGCATTCTTTTATCAAATTGAATTTCTAGTGGGTTATTTTACTCCCAAGTTTTTTGAGTTTATATTTTTTTG
ACTACAGTTGAGCGTTAGGGCTTGACAATCTAATGTTAGAATATGTTAGTCTATGTGACTTGGATTAATTCATAGGTTAAGATATCTTTTTG
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKGCENPTCVEIGDCCSHLKLPFTIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
RHPGRTKKQEPASSSSTAGPSKGKSGRKKK