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ClCG04G007760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G007760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr04:22757347..22760929
RNA-Seq ExpressionClCG04G007760
SyntenyClCG04G007760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581831.1 hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sororia]3.0e-0843.17Show/hide
Query:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH
        MVDP FI+IPVVFLS+ VV TVLSLLCR                                                           G AGG++SGG  H
Subjt:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH

Query:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG
        FGG AH GGLHH H A   HHA  HFGGGGHD GGGGGG
Subjt:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG

KGN54297.1 hypothetical protein Csa_018030 [Cucumis sativus]6.9e-0551.8Show/hide
Query:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH
        MVD  FI+IPVVFLS+ VV  VLSLLCRW  GG++ G+G  FGGA G GGGDD G  DGGGGGG DGGGGG  G                GG S GG   
Subjt:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH

Query:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG
              GGG        GG       GGGG  GGGGGGG
Subjt:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG

XP_023526886.1 holotricin-3-like [Cucurbita pepo subsp. pepo]6.1e-0967.69Show/hide
Query:  SSAFFTVLALLCWGRAGGSSSGGRPHFGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG
        +S  FTVL+LLC G AGG++SGG  HFGG  H GGLHH H A   HHA  HFGGGGHD GGGGGG
Subjt:  SSAFFTVLALLCWGRAGGSSSGGRPHFGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L128 Uncharacterized protein3.4e-0551.8Show/hide
Query:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH
        MVD  FI+IPVVFLS+ VV  VLSLLCRW  GG++ G+G  FGGA G GGGDD G  DGGGGGG DGGGGG  G                GG S GG   
Subjt:  MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPH

Query:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG
              GGG        GG       GGGG  GGGGGGG
Subjt:  FGGVAHGGGLHHYHGAAGGHHAAHHFGGGGHDGGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATCCGCCATTTATTGTAATCCCTGTGGTTTTTCTTTCAGTTTCTGTAGTTCTCACGGTGTTGAGTTTACTTTGCCGGTGGAAAGCTGGTGGCAATACCGGCGG
AGAAGGTGGTCAATTCGGCGGCGCCCATGGTGGAGGTGGAGGAGACGATGATGGGAGTTACGATGGTGGTGGTGGTGGAGGCAATGATGGTGGCGGTGGAGGCAGCGGCG
GTAGCTCTGCCTTTTTCACGGTGTTGGCTTTACTTTGCTGGGGCAGAGCGGGTGGCAGTTCCAGCGGAGGACGTCCTCATTTCGGCGGAGTTGCCCACGGTGGAGGATTG
CATCATTATCATGGAGCTGCCGGCGGCCACCACGCAGCACACCATTTTGGAGGTGGAGGACACGATGGTGGAGGTGGCGGCGGCGGTAGCTCTGCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATCCGCCATTTATTGTAATCCCTGTGGTTTTTCTTTCAGTTTCTGTAGTTCTCACGGTGTTGAGTTTACTTTGCCGGTGGAAAGCTGGTGGCAATACCGGCGG
AGAAGGTGGTCAATTCGGCGGCGCCCATGGTGGAGGTGGAGGAGACGATGATGGGAGTTACGATGGTGGTGGTGGTGGAGGCAATGATGGTGGCGGTGGAGGCAGCGGCG
GTAGCTCTGCCTTTTTCACGGTGTTGGCTTTACTTTGCTGGGGCAGAGCGGGTGGCAGTTCCAGCGGAGGACGTCCTCATTTCGGCGGAGTTGCCCACGGTGGAGGATTG
CATCATTATCATGGAGCTGCCGGCGGCCACCACGCAGCACACCATTTTGGAGGTGGAGGACACGATGGTGGAGGTGGCGGCGGCGGTAGCTCTGCCTGTTGA
Protein sequenceShow/hide protein sequence
MVDPPFIVIPVVFLSVSVVLTVLSLLCRWKAGGNTGGEGGQFGGAHGGGGGDDDGSYDGGGGGGNDGGGGGSGGSSAFFTVLALLCWGRAGGSSSGGRPHFGGVAHGGGL
HHYHGAAGGHHAAHHFGGGGHDGGGGGGGSSAC