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ClCG04G010730 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G010730
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNeuraminidase
Genome locationCG_Chr04:25741354..25744832
RNA-Seq ExpressionClCG04G010730
SyntenyClCG04G010730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER28592.1 neuraminidase [Striga asiatica]2.9e-0545.21Show/hide
Query:  SRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQ
        +RIIR   DR PP RRH +R+   R+DQI   R+ + VEIP+   H+EEI P+ M  M L     R L++D Q
Subjt:  SRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQ
KAG7012142.1 hypothetical protein SDJN02_24894, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-2363.54Show/hide
Query:  MYKPNSRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQICSISNSQKLSPRFRVHV
        MY+P+S I+RP+SD RP S RHR+ VS RRID+I+LRRIP  +EIPKS A +EEIVPM+M  MIL IQK   LKHDFQIC + N Q  S +F VHV
Subjt:  MYKPNSRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQICSISNSQKLSPRFRVHV
TrEMBL top hitse value%identityAlignment
A0A0A0LT31 Uncharacterized protein1.8e-2991.14Show/hide
Query:  RLMGRIKAMEFVGKCSGKGCILHIREVYRRVVVWPGAIIMAVVLKGFVYAASISTTVNVWLAMAKKSSLLSAPLITLSR
        R+ GRIKA EF GKCSGKGCILHI EV+RRVVVWPGAIIMAVVLKGFVYAASISTTVNVWLAMAKKSS LSAPLITLSR
Subjt:  RLMGRIKAMEFVGKCSGKGCILHIREVYRRVVVWPGAIIMAVVLKGFVYAASISTTVNVWLAMAKKSSLLSAPLITLSR
A0A5A7P7A4 Neuraminidase1.4e-0545.21Show/hide
Query:  SRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQ
        +RIIR   DR PP RRH +R+   R+DQI   R+ + VEIP+   H+EEI P+ M  M L     R L++D Q
Subjt:  SRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAACCAAACTCCAGGATTATCCGCCCTAATTCTGATCGCCGCCCACCCTCCCGTCGGCACCGCCACCGTGTTTCTTTCCGGCGGATCGATCAGATTGTACTTCG
CCGGATCCCTAGCGGCGTTGAAATTCCCAAATCCCCTGCCCACAACGAAGAAATTGTGCCCATGAACATGTATCGGATGATTCTCCGCATTCAAAAAATTCGTACCCTGA
AACACGATTTCCAAATCTGTTCCATATCGAACAGCCAAAAGCTTAGTCCCAGATTCCGTGTTCATGTTTTCCCAGATGGGCAGTTCTGGAGATTGAGGCTTATGGGGAGA
ATCAAGGCTATGGAGTTTGTTGGAAAATGCAGTGGCAAAGGCTGTATCCTTCATATCAGGGAGGTTTACAGAAGAGTGGTGGTTTGGCCAGGAGCTATCATAATGGCTGT
GGTATTGAAGGGTTTTGTGTATGCAGCATCAATCTCCACCACTGTTAATGTATGGTTGGCTATGGCAAAGAAGAGTTCATTGTTGAGTGCTCCATTAATTACTCTCAGCA
GAATTCTAATTGCCATTGCCATATTCCTAGGATTTCAAGAAGAGAATTCGATTGTTGGTTTGAAAGAGTCAAGACCCAGAATTGAAGTGGGTTGGCTTGAGTTTATCTTG
TTCTTTATTAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAACCAAACTCCAGGATTATCCGCCCTAATTCTGATCGCCGCCCACCCTCCCGTCGGCACCGCCACCGTGTTTCTTTCCGGCGGATCGATCAGATTGTACTTCG
CCGGATCCCTAGCGGCGTTGAAATTCCCAAATCCCCTGCCCACAACGAAGAAATTGTGCCCATGAACATGTATCGGATGATTCTCCGCATTCAAAAAATTCGTACCCTGA
AACACGATTTCCAAATCTGTTCCATATCGAACAGCCAAAAGCTTAGTCCCAGATTCCGTGTTCATGTTTTCCCAGATGGGCAGTTCTGGAGATTGAGGCTTATGGGGAGA
ATCAAGGCTATGGAGTTTGTTGGAAAATGCAGTGGCAAAGGCTGTATCCTTCATATCAGGGAGGTTTACAGAAGAGTGGTGGTTTGGCCAGGAGCTATCATAATGGCTGT
GGTATTGAAGGGTTTTGTGTATGCAGCATCAATCTCCACCACTGTTAATGTATGGTTGGCTATGGCAAAGAAGAGTTCATTGTTGAGTGCTCCATTAATTACTCTCAGCA
GAATTCTAATTGCCATTGCCATATTCCTAGGATTTCAAGAAGAGAATTCGATTGTTGGTTTGAAAGAGTCAAGACCCAGAATTGAAGTGGGTTGGCTTGAGTTTATCTTG
TTCTTTATTAAGTATTAA
Protein sequenceShow/hide protein sequence
MYKPNSRIIRPNSDRRPPSRRHRHRVSFRRIDQIVLRRIPSGVEIPKSPAHNEEIVPMNMYRMILRIQKIRTLKHDFQICSISNSQKLSPRFRVHVFPDGQFWRLRLMGR
IKAMEFVGKCSGKGCILHIREVYRRVVVWPGAIIMAVVLKGFVYAASISTTVNVWLAMAKKSSLLSAPLITLSRILIAIAIFLGFQEENSIVGLKESRPRIEVGWLEFIL
FFIKY