CuGenDBv2

Gene ID	ClCG04G010840
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	pumilio homolog 1-like
Genome location	CG_Chr04:25823612..25825868
RNA-Seq Expression	ClCG04G010840
Synteny	ClCG04G010840
Gene Ontology terms	NA
InterPro domains	IPR012940 - Nucleic acid binding NABP

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7031598.1 Pumilio-like 2 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-67

46.7

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+G RGGDEGVNGNGSLFMLQPGV A EDS I+SR VAGDW GDGLIGLPGLG+GS K+    +L              S  TS NAF++ LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG GASTPHTYAS          T + +++       +  VGG   +T+DKR              ++D +DLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------
        FSGMNLSTNGILDDE         EID+RHNFFNLQ+DQND K FL+  +                                                  
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------

Query:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                                                  +HLGS NLPPL ENA AAASAMGM+GMNNR FNGLALGSS+ ET+ + QNN+
Subjt:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

XP_008461691.1 PREDICTED: pumilio homolog 1-like [Cucumis melo]

2.3e-71

50.38

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVN NGSLFMLQPGV  KEDS I+SR VAGDWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG+GAS PHTYAS     +         +V R        VGG   +TM+KR+             ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLS NGILDDES        EID+RHNFFNLQTDQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN
                             SFLN        +P       +HLGS NLPPL ENA AAASAMGMS +NNRAFNGLALGSS+ ETAS+ QNN
Subjt:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN

XP_011654958.1 pumilio homolog 1 [Cucumis sativus]

1.4e-68

49.75

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVN NGSLFMLQPGV  KED  I SR VA DWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQG+SAVQG+GAS PHTYAS     +         +V R        VGG   +TMDKR+             ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLS NGILDDES        EID+RHNFFNLQTDQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                             SFLN        +P       +HLGS NLPPL ENA AAASAMGMS +NNRAFNGLALGSS+ ETAS+ QNN+
Subjt:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

XP_023537110.1 pumilio homolog 1-like [Cucurbita pepo subsp. pepo]

1.6e-67

46.7

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+G RGGDEGVNGNGSLFMLQPGV A EDS I+SR VAGDW GDGLIGLPGLG+GS K+    +L              S  TS NAF++ LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG GASTPHTYAS          T + +++       +  VGG   +T+DKR               SD +DLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------
        FSGMNLSTNGILDDE         EID+RHNFFNLQ+DQND K FL+  +                                                  
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------

Query:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                                                  +HLG+ NLPPL ENA AAASAMGM+GMNNR FNGLALGSS+ ET+ + QNN+
Subjt:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

XP_038889881.1 pumilio homolog 1-like [Benincasa hispida]

1.9e-73

50.89

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVNGNGSLFMLQPGV AKEDS ++ R VAGDWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG+GA+TPHTYAS     +         +V R        VGG   +TMDKR              ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLSTNGILDD+S        +ID+RHNFFNLQ DQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  --------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                            SFLN        +P       +HLGS NLPPL ENA AAASAMGMSGMNNRAFNGLALGSS+ ETAS+ QNNS
Subjt:  --------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQA7 PUM-HD domain-containing protein

6.8e-69

49.75

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVN NGSLFMLQPGV  KED  I SR VA DWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQG+SAVQG+GAS PHTYAS     +         +V R        VGG   +TMDKR+             ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLS NGILDDES        EID+RHNFFNLQTDQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                             SFLN        +P       +HLGS NLPPL ENA AAASAMGMS +NNRAFNGLALGSS+ ETAS+ QNN+
Subjt:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

A0A1S3CFB3 pumilio homolog 1-like

1.1e-71

50.38

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVN NGSLFMLQPGV  KEDS I+SR VAGDWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG+GAS PHTYAS     +         +V R        VGG   +TM+KR+             ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLS NGILDDES        EID+RHNFFNLQTDQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN
                             SFLN        +P       +HLGS NLPPL ENA AAASAMGMS +NNRAFNGLALGSS+ ETAS+ QNN
Subjt:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN

A0A5D3BVQ2 Pumilio-like protein 1-like

1.1e-71

50.38

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+GSRGGDEGVN NGSLFMLQPGV  KEDS I+SR VAGDWTGDGLIGLPGLGLGS K+    +L              S  TS NAFED LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG+GAS PHTYAS     +         +V R        VGG   +TM+KR+             ASDPSDLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRV--------LVVLRL-------VGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------
        FSGMNLS NGILDDES        EID+RHNFFNLQTDQND K                                                         
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKK---------------------------------------------------------

Query:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN
                             SFLN        +P       +HLGS NLPPL ENA AAASAMGMS +NNRAFNGLALGSS+ ETAS+ QNN
Subjt:  ---------------------SFLN------CWDP-------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNN

A0A6J1GX38 pumilio homolog 1-like

6.4e-67

46.45

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+G RGGDEG NGNGSLFMLQ GV A EDS I+SR VAGDW GDGLIGLPGLG+GS K+    +L              S  TS NAF++ LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHL------------ASDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG GASTPHTYAS          T + +++       +  VGG   +T+DKR              +SD +DLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHL------------ASDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------
        FSGMNLSTNGILDDE         EID+RHNFFNLQ+DQND K FL+  +                                                  
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------

Query:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                                                  +HLGS NLPPL ENA AAASAMGM+GMNNR FNGLALGSS+ ET+ + QNN+
Subjt:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

A0A6J1KW82 pumilio homolog 1-like

8.4e-67

46.7

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS
        GIGDRR+G RGGDEGVNGNGSLFMLQPGV A EDS I+SR VAGDW GDGLIGLPGLG+GS K+    +L              S  TS NAF++ LEAS
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSF-----------SSETSCNAFEDILEAS

Query:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSS
        ESQFAYLHQDMA IG NKQGISAVQG GASTPHTYAS          T + +++       + LVGG   +T+DKR               SD +DLVSS
Subjt:  ESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSS

Query:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------
        FSGMNLSTNGILDDE         EID+RHNFFNLQ+DQND K FL+  +                                                  
Subjt:  FSGMNLSTNGILDDES------APEIDNRHNFFNLQTDQNDKKSFLNCWDP-------------------------------------------------

Query:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS
                                                  +HLGS NL PL ENA AAASAMGM+GMNN  FNGLALGSS+ ET+ + QNN+
Subjt:  ------------------------------------------SHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

SwissProt top hits

e value

%identity

Alignment

Q9ZW02 Pumilio homolog 3

1.4e-05

28.19

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM
        G+GDRR         VN + SLF + PG EA      K    A +W  +GLI   GLGLG  ++       SF+     +    +++      +    D 
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM

Query:  AAIGENKQGISAVQGIGASTPHTYAST-------------QELRVLVVLRLV----GGYNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI
             N    SA QGIGA +P+ YA+              Q +  +    L     G  ++ DKR+ +            ++ SDLV++ SG+NLS  G 
Subjt:  AAIGENKQGISAVQGIGASTPHTYAST-------------QELRVLVVLRLV----GGYNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID---NRHNFFNLQTDQND
        LD+    E D    R+  F LQ   N+
Subjt:  LDDESAPEID---NRHNFFNLQTDQND

Q9ZW06 Pumilio homolog 2

2.4e-10

26.39

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH
        G+GDRR         VN + SLF + PG + ++  +    K+   + +W  +GLIGLPGLG+G  ++    +  +          +    AS + F    
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH

Query:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI
         D     +N    SA QGIGA +P++YA+          T + + +       L  +G    ++ DKR+ +         ++ SDLV++ SGMNLS +G 
Subjt:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS
        LD+    E D                  N+H F N ++DQ  K + L                                C +             + LG+
Subjt:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS

Query:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET
        +N  P+ ENA +AASAMG SGM++R   G  ++ G +L E+
Subjt:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET

Q9ZW07 Pumilio homolog 1

1.1e-10

29.3

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM
        G+GDRR         VN N SLF + PG E +     K+   A +W  +GLIGLPGLGLG  ++    +  +        A +    AS + F     D 
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM

Query:  AAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI
             N    SA QGIGA +P++YA+          T + + +       L  +G    ++ DKR+ +            ++ SDLV++ SG+NLS +  
Subjt:  AAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID---NRHNFFNLQTDQND--KKSFLNCWDPSHLGSSNLPPLCENATAAASAMGMSGMNNRAFNG
        LDD S  E D    R+  F LQ   N+  +  F N  D +H            AT +     + G +  A+NG
Subjt:  LDDESAPEID---NRHNFFNLQTDQND--KKSFLNCWDPSHLGSSNLPPLCENATAAASAMGMSGMNNRAFNG

Arabidopsis top hits

e value

%identity

Alignment

AT2G29140.1 pumilio 3

9.6e-07

28.19

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM
        G+GDRR         VN + SLF + PG EA      K    A +W  +GLI   GLGLG  ++       SF+     +    +++      +    D 
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM

Query:  AAIGENKQGISAVQGIGASTPHTYAST-------------QELRVLVVLRLV----GGYNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI
             N    SA QGIGA +P+ YA+              Q +  +    L     G  ++ DKR+ +            ++ SDLV++ SG+NLS  G 
Subjt:  AAIGENKQGISAVQGIGASTPHTYAST-------------QELRVLVVLRLV----GGYNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID---NRHNFFNLQTDQND
        LD+    E D    R+  F LQ   N+
Subjt:  LDDESAPEID---NRHNFFNLQTDQND

AT2G29190.1 pumilio 2

1.7e-11

26.39

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH
        G+GDRR         VN + SLF + PG + ++  +    K+   + +W  +GLIGLPGLG+G  ++    +  +          +    AS + F    
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH

Query:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI
         D     +N    SA QGIGA +P++YA+          T + + +       L  +G    ++ DKR+ +         ++ SDLV++ SGMNLS +G 
Subjt:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS
        LD+    E D                  N+H F N ++DQ  K + L                                C +             + LG+
Subjt:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS

Query:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET
        +N  P+ ENA +AASAMG SGM++R   G  ++ G +L E+
Subjt:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET

AT2G29190.2 pumilio 2

1.7e-11

26.39

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH
        G+GDRR         VN + SLF + PG + ++  +    K+   + +W  +GLIGLPGLG+G  ++    +  +          +    AS + F    
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDI---KSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLH

Query:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI
         D     +N    SA QGIGA +P++YA+          T + + +       L  +G    ++ DKR+ +         ++ SDLV++ SGMNLS +G 
Subjt:  QDMAAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA---------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS
        LD+    E D                  N+H F N ++DQ  K + L                                C +             + LG+
Subjt:  LDDESAPEID------------------NRHNFFNLQTDQNDKKSFL-------------------------------NCWD------------PSHLGS

Query:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET
        +N  P+ ENA +AASAMG SGM++R   G  ++ G +L E+
Subjt:  SNLPPLCENATAAASAMGMSGMNNRAFNG--LALGSSLFET

AT2G29200.1 pumilio 1

7.6e-12

29.3

Show/hide

Query:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM
        G+GDRR         VN N SLF + PG E +     K+   A +W  +GLIGLPGLGLG  ++    +  +        A +    AS + F     D 
Subjt:  GIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLTSFSSETSCNAFEDILEASESQFAYLHQDM

Query:  AAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI
             N    SA QGIGA +P++YA+          T + + +       L  +G    ++ DKR+ +            ++ SDLV++ SG+NLS +  
Subjt:  AAIGENKQGISAVQGIGASTPHTYAS----------TQELRVLV-----VLRLVGG--YNTMDKRHLA------------SDPSDLVSSFSGMNLSTNGI

Query:  LDDESAPEID---NRHNFFNLQTDQND--KKSFLNCWDPSHLGSSNLPPLCENATAAASAMGMSGMNNRAFNG
        LDD S  E D    R+  F LQ   N+  +  F N  D +H            AT +     + G +  A+NG
Subjt:  LDDESAPEID---NRHNFFNLQTDQND--KKSFLNCWDPSHLGSSNLPPLCENATAAASAMGMSGMNNRAFNG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TATGCAAAAGAATTGAATTTAGGAAAAACCTCCAGGGTAAGGGAAGGAGCTAATATTACCGTCCCAAATTCTTTCAGTAGAATCCAAGATGTCAACAGCCAAACTCTTCG
GCGCCGAGGTATTGGAGATAGGAGGGATGGTAGTAGAGGTGGTGATGAAGGGGTTAATGGGAATGGGTCACTTTTCATGTTGCAGCCTGGAGTTGAAGCCAAAGAGGATT
CTGATATCAAATCAAGGCTGGTTGCTGGTGATTGGACCGGTGATGGCCTTATTGGGCTGCCAGGGTTGGGACTTGGGAGTAGTAAGCAATGGAATGAATATCTCCTGACA
TCCTTCTCGTCTGAGACTAGCTGCAACGCATTTGAGGACATTTTGGAAGCTTCAGAAAGTCAATTTGCTTACTTACATCAAGATATGGCAGCAATTGGTGAGAACAAACA
AGGCATATCTGCAGTCCAAGGAATTGGTGCCTCTACCCCTCATACTTATGCATCAACTCAAGAGCTCCGAGTCCTCGTAGTCCTACGGTTGGTGGGAGGATATAACACTA
TGGATAAAAGACATCTGGCGAGTGACCCTTCAGACCTGGTGTCTTCTTTTTCTGGCATGAATTTGTCAACAAATGGTATTCTAGATGATGAGAGCGCGCCAGAGATTGAT
AATCGTCATAACTTCTTCAATCTGCAAACTGATCAAAATGATAAAAAAAGTTTCCTCAATTGTTGGGACCCATCACATCTCGGCAGTAGTAATTTACCTCCGCTGTGTGA
GAATGCTACTGCTGCTGCATCAGCAATGGGAATGAGTGGCATGAATAATAGAGCATTCAATGGATTGGCTTTAGGATCGAGTTTGTTTGAAACAGCCAGTAAAATTCAAA
ATAACAGC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

YAKELNLGKTSRVREGANITVPNSFSRIQDVNSQTLRRRGIGDRRDGSRGGDEGVNGNGSLFMLQPGVEAKEDSDIKSRLVAGDWTGDGLIGLPGLGLGSSKQWNEYLLT
SFSSETSCNAFEDILEASESQFAYLHQDMAAIGENKQGISAVQGIGASTPHTYASTQELRVLVVLRLVGGYNTMDKRHLASDPSDLVSSFSGMNLSTNGILDDESAPEID
NRHNFFNLQTDQNDKKSFLNCWDPSHLGSSNLPPLCENATAAASAMGMSGMNNRAFNGLALGSSLFETASKIQNNS

ClCG04G010840 (gene) of Watermelon (Charleston Gray) v2.5 genome