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ClCG04G011490 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G011490
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionGTPase IMAP family member 1, putative
Genome locationCG_Chr04:26502422..26502953
RNA-Seq ExpressionClCG04G011490
SyntenyClCG04G011490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]4.8e-0946.51Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPY
        MV +W+ +++  CV+SAI IATVS+ I+T+L   F  LSI ++ CFV    A++IN   + +S+ILYC GG    ++ FIA AIPY
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPY

KAF3437981.1 hypothetical protein FNV43_RR20737 [Rhamnella rubrinervis]4.9e-0639.78Show/hide
Query:  WEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIP------YASKFQ
        W K++V  C  SAI IA +S Q+ + L  +FHFLS++++  FV   ++K+IN K    +++L     +++VTAFFIAI+IP      Y  KF+
Subjt:  WEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIP------YASKFQ

KAF3947053.1 hypothetical protein CMV_026760 [Castanea mollissima]7.6e-0739.18Show/hide
Query:  QWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL
        +W +L VT C+ SAI IA VS+Q+ ++LS  FH LS+T++  F    ++K I  K    +Q+L  FG F+ +TAFF+AI IP+    +  +  +Y +
Subjt:  QWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1755.56Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL
        MV +W+ ++V  CV+SAIAIATVS+QIE KL  +F+FLS+TL+ CF F A  K+     +RVS+ILYC GG   VTA FIA AIPYAS FQI+  +IYL+
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL

Query:  FMFSDIVV
        F    ++V
Subjt:  FMFSDIVV

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2468.93Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL
        M+MQWE +MVT C+ +AIAIATVS+QI+TKLS MF FLS  LMGCF FT  AK+I  K QRVS ILY  GGF  VTAFFIAIAIPYA  FQI+TL +YL+
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL

Query:  FMF
        F+F
Subjt:  FMF

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein8.5e-1243.12Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL
        MV + +++++  C++SAI IATVS+Q +TKL   F FLSI ++ CF+    A++I+   + +S+ILYCFGGF   T  FIA AIPY + F I+ +V+Y +
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL

Query:  FMFSDIVVI
        F    +++I
Subjt:  FMFSDIVVI

A0A0A0LQB6 Uncharacterized protein2.5e-1654.29Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIET--KLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIY
        MV +W++++V +CV+SAI IATVS+QIET  +L   F FLSI ++ CF F   AK+     + VS+ILYC GGF  VTAFFIA AIP+A  FQI+  ++Y
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIET--KLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIY

Query:  LLFMF
        LLF F
Subjt:  LLFMF

A0A0A0LSX4 Uncharacterized protein4.2e-1147.78Show/hide
Query:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKF
        MV +W+ +++  CV+SAI IATVS+ I+T+L   F  LSI ++ CFV    A++IN   + +S+ILYC GG    ++ FIA AIPYAS F
Subjt:  MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKF

A0A7N2M5A3 Uncharacterized protein4.8e-0739.22Show/hide
Query:  MQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLLFM
        M W ++M+  C+ SAI IA VS+Q+  +LS  FH LS+  +  F    +++ I  K    +Q+L   G F+ VTAFFIAIAIP+    +  T  IY + +
Subjt:  MQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLLFM

Query:  FS
        F+
Subjt:  FS

A0A7N2R866 Uncharacterized protein8.7e-0937.76Show/hide
Query:  MQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL
        M+W ++++  C+ SA+ IA +S+Q+ T+L  +FH  S+ ++  F    ++K IN K  R +Q+L  FG F+ VTAFFIAI IP+    +  + V+Y +
Subjt:  MQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATGCAGTGGGAAAAATTGATGGTTACAATTTGTGTAACCTCAGCCATAGCCATAGCCACCGTTTCCCTCCAAATTGAAACCAAGTTATCTTTAATGTTT
CATTTTCTGTCGATTACGTTAATGGGTTGCTTTGTTTTTACAGCCTTAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTACTGTTTTGGT
GGGTTCTGGTTGGTGACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATCTAAGTTTCAAATTGTAACATTGGTCATCTACCTCCTCTTCATGTTCTCAGAC
ATAGTTGTAATTTGGTTACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATGCAGTGGGAAAAATTGATGGTTACAATTTGTGTAACCTCAGCCATAGCCATAGCCACCGTTTCCCTCCAAATTGAAACCAAGTTATCTTTAATGTTT
CATTTTCTGTCGATTACGTTAATGGGTTGCTTTGTTTTTACAGCCTTAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTACTGTTTTGGT
GGGTTCTGGTTGGTGACTGCCTTCTTCATTGCCATTGCCATTCCTTATGCATCTAAGTTTCAAATTGTAACATTGGTCATCTACCTCCTCTTCATGTTCTCAGAC
ATAGTTGTAATTTGGTTACTATAA
Protein sequenceShow/hide protein sequence
MVMQWEKLMVTICVTSAIAIATVSLQIETKLSLMFHFLSITLMGCFVFTALAKVINVKQQRVSQILYCFGGFWLVTAFFIAIAIPYASKFQIVTLVIYLLFMFSD
IVVIWLL