CuGenDBv2

Gene ID	ClCG04G011610
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	MADS-box protein CMB1-like isoform X1
Genome location	CG_Chr04:26590560..26594413
RNA-Seq Expression	ClCG04G011610
Synteny	ClCG04G011610
Gene Ontology terms	GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR002100 - Transcription factor, MADS-box IPR002487 - Transcription factor, K-box IPR033896 - MADS MEF2-like IPR036879 - Transcription factor, MADS-box superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008453343.1 PREDICTED: MADS-box protein CMB1-like isoform X1 [Cucumis melo]

4.8e-99

68.94

Show/hide

Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSS +                                    
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ
           F LV+ +ISM KTLEKYRRCSYGI++AT QV+EN PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTKTQSLL Q
Subjt:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ

Query:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL
        LAELQ K H+ L   + GL                LEESSAQ+  AAAA WGWE GA GGH+MEYPSR VASQSDAFFHP IQ TPTLQIGYNS+GS GL
Subjt:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL

Query:  NSV-EPPSQNAN-NPYHLGWML
        N V   PSQN N N +HLGWM+
Subjt:  NSV-EPPSQNAN-NPYHLGWML

XP_008453505.1 PREDICTED: MADS-box protein CMB1-like isoform X3 [Cucumis melo]

1.0e-96

67.6

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSYGI++AT QV+EN PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTKTQSLL QL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN
        AELQ K H+ L   + GL                LEESSAQ+  AAAA WGWE GA GGH+MEYPSR VASQSDAFFHP IQ TPTLQIGYNS+GS GLN
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN

Query:  SV-EPPSQNAN-NPYHLGWML
         V   PSQN N N +HLGWM+
Subjt:  SV-EPPSQNAN-NPYHLGWML

XP_011650324.1 agamous-like MADS-box protein MADS2 isoform X4 [Cucumis sativus]

2.0e-97

66.46

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSYGI +AT QV+ N PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTKTQSLL+QL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWEGAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNS
         ELQ K  + L   + GL                LEESSAQ+  AAA  WGWE  AGGH+MEYPSR VASQSDAFFHPI+QPTPTLQIGY+S+GS G+N 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWEGAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNS

Query:  VEPPSQNA-NNPYHLGWML
        +  PSQNA NN +HLGWM+
Subjt:  VEPPSQNA-NNPYHLGWML

XP_038895225.1 agamous-like MADS-box protein MADS2 isoform X1 [Benincasa hispida]

2.1e-110

72.15

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSYGILDA  QVNENH  SFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        AELQHK H+ L   + GL                LEESSAQL AAAA WGWEGAAGGHSME+PSRVASQSDAFFHPIIQPTPTLQ+GYNSVGS GLN+V 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQNANNPYHLGWML
        PPSQNANN YH GWM+
Subjt:  PPSQNANNPYHLGWML

XP_038895226.1 agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida]

3.5e-110

72.47

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSYGILDA  QVNENHP SFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        AELQHK H+ L   + GL                LEESSAQL AAAA WGWEGAAGGHSME+PSRVASQSDAFFHPIIQPTPTLQ+GYNSVGS GLN+V 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQNANNPYHLGWML
        PPSQNANN YH GWM+
Subjt:  PPSQNANNPYHLGWML

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BWA4 MADS-box protein CMB1-like isoform X2

1.2e-95

68.01

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSS +                                    
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ
           F LV+ +ISM KTLEKYRRCSYGI++AT Q     PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTKTQSLL Q
Subjt:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ

Query:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL
        LAELQ K H+ L   + GL                LEESSAQ+  AAAA WGWE GA GGH+MEYPSR VASQSDAFFHP IQ TPTLQIGYNS+GS GL
Subjt:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL

Query:  NSV-EPPSQNAN-NPYHLGWML
        N V   PSQN N N +HLGWM+
Subjt:  NSV-EPPSQNAN-NPYHLGWML

A0A1S3BWE3 MADS-box protein CMB1-like isoform X3

4.8e-97

67.6

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSYGI++AT QV+EN PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTKTQSLL QL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN
        AELQ K H+ L   + GL                LEESSAQ+  AAAA WGWE GA GGH+MEYPSR VASQSDAFFHP IQ TPTLQIGYNS+GS GLN
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN

Query:  SV-EPPSQNAN-NPYHLGWML
         V   PSQN N N +HLGWM+
Subjt:  SV-EPPSQNAN-NPYHLGWML

A0A1S3BWT5 MADS-box protein CMB1-like isoform X1

2.3e-99

68.94

Show/hide

Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSS +                                    
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ
           F LV+ +ISM KTLEKYRRCSYGI++AT QV+EN PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN +ELEQLEHQLETSLERIRSTKTQSLL Q
Subjt:  RDKFCLVV-IISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQ

Query:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL
        LAELQ K H+ L   + GL                LEESSAQ+  AAAA WGWE GA GGH+MEYPSR VASQSDAFFHP IQ TPTLQIGYNS+GS GL
Subjt:  LAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQL-TAAAATWGWE-GAAGGHSMEYPSR-VASQSDAFFHPIIQPTPTLQIGYNSVGSTGL

Query:  NSV-EPPSQNAN-NPYHLGWML
        N V   PSQN N N +HLGWM+
Subjt:  NSV-EPPSQNAN-NPYHLGWML

A0A6J1GUR1 MADS-box protein J2-like isoform X2

1.0e-91

60.8

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKLFEF  GS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM +TLEKYRRCSY I D  R +N N PQSFDDYLNLKATVE MQQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTKT++L++QL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        AELQ K H+              +  +  ++   LEESSAQ+ AA+A WGWEG AGGHSM+YPSR+ASQSDAFF+PI QP PTLQIGYNSVGS GL++  
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQNAN--------NPYHLGWML
          + N+N        N + LGWML
Subjt:  PPSQNAN--------NPYHLGWML

A0A6J1K4C3 MADS-box protein EJ2-like isoform X2

4.7e-92

61.73

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKLFEF  GS                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLEKYRRCSY I D  R +N N PQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLN KELEQLEHQLETSLERIRSTKTQ+L+DQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN---
        AELQ K H+              +  +  ++   LEESSAQ+ AA+A WGWEG AGGHSM+Y SR+ASQSDAFF+PI QP PTLQ+GYNSVGS GL+   
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN---

Query:  -----SVEPPSQNANNPYHLGWML
             +V  P QN N  + +GWML
Subjt:  -----SVEPPSQNANNPYHLGWML

SwissProt top hits

e value

%identity

Alignment

K4DEK0 MADS-box protein J2

4.6e-52

44.83

Show/hide

Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELS+LCDAE+ALIIFS+RGKL+EF S S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM  TLEKY++CSY  LD    V++    ++++Y+ LKA VE +Q+SQR++LGEDLG LN+KELEQLEHQL+ SL+++RS KTQS+LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDA--FFHPIIQPTPTLQIGYNSVGSTGLNS
        A+LQ K  +        L   +    N       LEES+A++    +   W G  GG +MEY +R+  Q+ A  FF P+   + + Q GYN       + 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDA--FFHPIIQPTPTLQIGYNSVGSTGLNS

Query:  VEPPSQNAN-NPYHLGWML
        V   +   N N +  GWML
Subjt:  VEPPSQNAN-NPYHLGWML

P29382 Developmental protein SEPALLATA 1

2.7e-52

43.53

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  +M KTL++Y++CSYG ++   +  +    S+ +YL LK   E +Q+ QRNLLGEDLGPLN+KELEQLE QL+ SL+++RS KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY-NSVGSTGLNSV
        ++LQ+K  + L             +   L +  D +    +        GWEG  G  ++ Y    A QS   + P ++  PTLQ+GY N V S  + + 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY-NSVGSTGLNSV

Query:  EPPSQNANNPYHLGWML
                N Y  GWML
Subjt:  EPPSQNANNPYHLGWML

Q39685 MADS-box protein CMB1

3.2e-53

46.06

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALI+FSNRGKL+EFC    STSC                                  
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                   M KTLE+Y+RCSYG L+ T Q ++    S+ +YL LKA V+ +Q+S RNLLGEDLG L+TKELEQLEHQL+ SL +IRS KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQP-TPTLQIGYNSVGSTGLNSV
        A+LQ K  + L+  +  L +              LEES A          W+             V    D FF P+  P    LQIGYN      +N+ 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQP-TPTLQIGYNSVGSTGLNSV

Query:  EPPSQNANNPYHLGWML
           +QN +  +  GWML
Subjt:  EPPSQNANNPYHLGWML

Q7Y040 MADS-box protein EJ2

3.2e-53

44.3

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KT+EKY+RCSY  L+A + V +    ++ +YL LKA VE +Q+SQRN LGEDLG L++K+LEQLE+QLE+SL++IRS KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        A+LQ K  +              ++ +   +   LEES A          WE   G H + +       ++ FF P+   + +   GYN V +  +N+  
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQNANNPYHLGWML
          + N N   H GWML
Subjt:  PPSQNANNPYHLGWML

Q8LLR2 Agamous-like MADS-box protein MADS2

5.0e-59

47.47

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFS RGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  SM KTLE+Y++CSYG ++ +R   E    S+ +YL LK+  E +Q++QRNLLGEDLGPLNTKELEQLE QLETSL+++RSTKTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        ++LQ+K  + +            IS+          ++  QL+       WE  +G  SM Y  + A QS  FF P ++  PTLQIGYN  GS+ L++  
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQNANNPYHLGWML
        P +    N +  GWML
Subjt:  PPSQNANNPYHLGWML

Arabidopsis top hits

e value

%identity

Alignment

AT1G24260.2 K-box region and MADS-box transcription factor family protein

2.5e-45

40.88

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILD---ATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLL
                  SM +TLE+Y++C+YG  +    +R+       S  +YL LK   + +Q++QRNLLGEDLGPL+TKELE LE QL++SL++IR+ +TQ +L
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILD---ATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLL

Query:  DQLAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN
        DQL +LQ K  +            +  +      + D  +   QL               H   +  +    S AFF P ++  P LQIGY      G  
Subjt:  DQLAELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLN

Query:  SVEPPSQNANNPYHLGWM
               + NN Y LGW+
Subjt:  SVEPPSQNANNPYHLGWM

AT1G24260.3 K-box region and MADS-box transcription factor family protein

5.0e-46

51.43

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILD---ATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLL
                  SM +TLE+Y++C+YG  +    +R+       S  +YL LK   + +Q++QRNLLGEDLGPL+TKELE LE QL++SL++IR+ +TQ +L
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILD---ATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLL

Query:  DQLAELQHKV
        DQL +LQ K+
Subjt:  DQLAELQHKV

AT3G02310.1 K-box region and MADS-box transcription factor family protein

2.0e-50

42.27

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE++LI+FSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  +M KTLE+Y++CSYG ++   +  +    S+ +YL LK   E +Q+ QRNLLGEDLGPLN+KELEQLE QL+ SL+++R  KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE
        ++LQ K HI        L +   +S+          E    +       GWEG    +      +  SQ     +  ++  PTLQIGY+    +   +V 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVE

Query:  PPSQN-ANNPYHLGWML
           Q+   N Y  GWML
Subjt:  PPSQN-ANNPYHLGWML

AT5G15800.1 K-box region and MADS-box transcription factor family protein

1.9e-53

43.53

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  +M KTL++Y++CSYG ++   +  +    S+ +YL LK   E +Q+ QRNLLGEDLGPLN+KELEQLE QL+ SL+++RS KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY-NSVGSTGLNSV
        ++LQ+K  + L             +   L +  D +    +        GWEG  G  ++ Y    A QS   + P ++  PTLQ+GY N V S  + + 
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY-NSVGSTGLNSV

Query:  EPPSQNANNPYHLGWML
                N Y  GWML
Subjt:  EPPSQNANNPYHLGWML

AT5G15800.2 K-box region and MADS-box transcription factor family protein

4.0e-51

41.77

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Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+ALIIFSNRGKL+EFCS S                                       
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFEL

Query:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL
                  +M KTL++Y++CSYG ++   +  +    S+ +YL LK   E +Q+ QRNLLGEDLGPLN+KELEQLE QL+ SL+++RS KTQ +LDQL
Subjt:  RDKFCLVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQL

Query:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY------------
        ++LQ+K  + L             +   L +  D +    +        GWEG  G  ++ Y    A QS   + P ++  PTLQ+G             
Subjt:  AELQHKVHISLYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGY------------

Query:  NSVGSTGLNSVEPPSQNANNPYHLGWML
        N V S  + +         N Y  GWML
Subjt:  NSVGSTGLNSVEPPSQNANNPYHLGWML

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGAGGAAGAGTAGAATTGAAGAGAATTGAGAACAAAATTAACAGGCAAGTCACTTTTGCCAAGAGGAGAAATGGTTTGCTTAAGAAAGCTTATGAACTC
TCAGTTCTTTGTGATGCTGAACTTGCTCTCATCATCTTCTCTAACCGTGGCAAGCTCTTTGAGTTTTGTAGTGGTTCTAGCTCGACTAGCTGTGTTTATCTCTCT
ATAGATCTAAGTCGTCTTGTTAAACATTTTGAAAACAAATTCGTAGATTATGATAGTTTGTGTTTAGGATCAGACATGATGTTTGAGCTGAGAGATAAATTTTGT
TTGGTTGTGATTATAAGCATGGCCAAAACGCTCGAGAAATATCGAAGGTGTAGTTATGGTATACTGGATGCTACTCGTCAAGTAAATGAGAACCATCCACAGAGC
TTTGATGATTATTTGAACCTAAAAGCCACAGTTGAATTCATGCAGCAATCTCAAAGAAACCTTTTGGGAGAAGATTTAGGTCCATTGAATACCAAGGAACTTGAG
CAACTTGAACATCAATTGGAGACATCCTTGGAGCGCATTAGATCCACAAAGACACAAAGCCTACTTGATCAGCTTGCAGAACTTCAACACAAGGTACACATATCT
TTATATATACTTAGTTTGGGATTGCACTCGTTTTCGTGTATCTCACTCAATTGTCTAACTATAATTTGTGACCTTGAAGAAAGCAGTGCACAACTCACGGCGGCG
GCCGCCACATGGGGCTGGGAAGGGGCCGCCGGAGGCCACAGCATGGAGTATCCCAGCCGTGTTGCTTCACAATCAGACGCCTTCTTCCACCCCATAATTCAACCC
ACTCCGACTTTACAAATTGGGTACAATTCTGTTGGGTCAACGGGGTTGAATAGTGTTGAACCTCCATCCCAAAATGCCAATAATCCGTATCACCTTGGCTGGATG
CTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAELALIIFSNRGKLFEFCSGSSSTSCVYLSIDLSRLVKHFENKFVDYDSLCLGSDMMFELRDKFC
LVVIISMAKTLEKYRRCSYGILDATRQVNENHPQSFDDYLNLKATVEFMQQSQRNLLGEDLGPLNTKELEQLEHQLETSLERIRSTKTQSLLDQLAELQHKVHIS
LYILSLGLHSFSCISLNCLTIICDLEESSAQLTAAAATWGWEGAAGGHSMEYPSRVASQSDAFFHPIIQPTPTLQIGYNSVGSTGLNSVEPPSQNANNPYHLGWM
L

ClCG04G011610 (gene) of Watermelon (Charleston Gray) v2.5 genome