; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG04G012800 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG04G012800
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCysteine-rich receptor-like protein kinase
Genome locationCG_Chr04:27629444..27632245
RNA-Seq ExpressionClCG04G012800
SyntenyClCG04G012800
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038884535.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]1.5e-3550.55Show/hide
Query:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK
        IIE S      Q WAGF L SRLR +K  +K+W AE+EK+ K +E+ LL+EI ++DLQ +  E  S E D+R + K DLLSLY+ E+ +LIQK KLNWL 
Subjt:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK

Query:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT
        LGD+NT FFHRFLAAK+R NLI +L ++Q   T SFR+IE+IIL   ++L +K     S P N+ W+ VS   N+ LI++ +
Subjt:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT

XP_038884536.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]1.5e-3550.55Show/hide
Query:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK
        IIE S      Q WAGF L SRLR +K  +K+W AE+EK+ K +E+ LL+EI ++DLQ +  E  S E D+R + K DLLSLY+ E+ +LIQK KLNWL 
Subjt:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK

Query:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT
        LGD+NT FFHRFLAAK+R NLI +L ++Q   T SFR+IE+IIL   ++L +K     S P N+ W+ VS   N+ LI++ +
Subjt:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT

XP_038884537.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]1.5e-3550.55Show/hide
Query:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK
        IIE S      Q WAGF L SRLR +K  +K+W AE+EK+ K +E+ LL+EI ++DLQ +  E  S E D+R + K DLLSLY+ E+ +LIQK KLNWL 
Subjt:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWLK

Query:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT
        LGD+NT FFHRFLAAK+R NLI +L ++Q   T SFR+IE+IIL   ++L +K     S P N+ W+ VS   N+ LI++ +
Subjt:  LGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL---NSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLT

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]6.3e-2146.9Show/hide
Query:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKED-LQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWL
        +IE+S        WA   L + LR  K  LKKW  E  K  K KE+ LL E+ ++D L ++ +    V+ D   + K DLL+LY++E+ +LIQKCKL WL
Subjt:  IIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKED-LQIENAELTSVELDLRSTSKVDLLSLYRMEQMNLIQKCKLNWL

Query:  KLGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL
        K GD+NT FFHRFL+ +KR NL  KL++DQ+  T   RDIE IIL
Subjt:  KLGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIIL

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]4.0e-2356.31Show/hide
Query:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED
        W + TF AI  +FGGLE IA++ LNL+ V  A IKVK NLCGF+PA+IE+ NE RGSI+LNFGD+     PS V+ +LF  DF NPID  RLN+V   E 
Subjt:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED

Query:  VSC
        + C
Subjt:  VSC

TrEMBL top hitse value%identityAlignment
A0A5A7V878 DUF4283 domain-containing protein1.2e-2050.51Show/hide
Query:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDE
        W+   + AI   FGG E I+LKT+NL+N S+AKIKV +NLCGF+PA +E+++  R +IFLNFGD++ +EAP  +++ LF    NN ID  R+N+V  DE
Subjt:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDE

A0A5D3CZ35 DNA/RNA polymerases superfamily protein8.3e-1954.95Show/hide
Query:  ISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDE
        I +HFGGLE IA +T+N +NVS+AKI+ K NLCGFIPA+IEI +E  G+IFLNFG +     PS V  +LF  +F+N +D  RL++V +DE
Subjt:  ISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDE

A0A5D3DFR0 Uncharacterized protein2.3e-1656.79Show/hide
Query:  TFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNN
        TF AI +HFGGLE IA +T+N LNVS+AKI++K+NLC FIPA+IEI ++ RG+ FL FGD+ ++  PS V+ +LF  D +N
Subjt:  TFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNN

A0A5D3DVS9 Uncharacterized protein9.5e-1543.56Show/hide
Query:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED
        W R+TF  I +H  GL +IA++TLNL N S A+I+V +NLCGF+ ++ EI +  RG+I+L+FGD E +  P   +  +   DF N ID+ ++  V  DED
Subjt:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED

Query:  V
        +
Subjt:  V

A0A5D3DYX0 Pseudouridylate synthase 7-like protein isoform X19.8e-2053Show/hide
Query:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED
        W R TF AI  HF GLE I+++TLN  NV +AKI++K NLCGF+PA+IEI +E RG+ FLN+GD+E +     V+ +L  KDF NPID  R+ +V +DE+
Subjt:  WNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTAATAAGAAATCTGTCGTTGGAATATGGAACAGAGCCACCTTTGGAGCTATCAGCTCCCACTTTGGAGGTTTGGAAGAAATAGCATTAAAGACACTTAATCT
TTTGAATGTATCAAAAGCCAAAATCAAAGTCAAAAGAAATTTATGTGGATTTATACCTGCATCAATTGAAATTAAAAATGAATTGAGAGGTTCTATATTTTTAAACTTTG
GGGATGTTGAAGCCATGGAAGCTCCTTCTTACGTACAAAAAGAATTATTTTTTAAAGATTTCAATAACCCAATCGATCAATGTCGTTTGAATAAAGTAGCTGAGGATGAA
GATGTTAGTTGTATTTTATCAAGCTGCAATAGAAAAGACCGAAATGTGATCTTATCGTCGGAGAAGACATCGGAAGTGTCTGAGCTCGATGAAGATGCTGAGCCTGCGTC
AAAGAAGACCAATGGTCATTTTCAAATCAAAAGTGTGCCAATCCAAGTCAGCAGCCACAAGTGGAAAAGACTAATTCGGGCGAAGTTCAAAAGACGACAGACTATCAAAA
GCTGGGCTCTTCATTGCCTCTTGGCTTTTGGTATTCCGATTTTATTTTTTAATGAGGAAGAGCAACAAATGTTTTTTTCCCAAGAAAGAAAAGCCACTACTCCTATTCGA
AAAGCCACGCCGACATCATTAAAAAAGAGACCTCACATCTTCAAGCCATTCCCAAAAGTCTATGTTAGGCGAAGGAATTCCCTTTACAACCATTGGTCTGCCTTAGCAAA
TACAGATCTGCTTGAGGAAAGCTGTGCAAAAATCCTTGTCCAGACACCTGCCCTTACAGGCTCATTAAATCAAGTTGATTCTCGACCAAGATCAGAGCATTTGGACTCGG
AAGTCGAGTCAATAGTTAGTGCAAGTAGTGAGGAAATTGAGCAATGTGATCCTGAGGAGCATCAAGAAAAGATTGCAACAATCGAATCATATGGAAAAGACATTGTCAAG
AAGTGTGATGGATATTCATTGAAGCCTATGGAAAATCTGGAGGCATACTTACTATGTGGGATGAGAGCAAATTATCAGTTAAAGAGCTGTTGGGTGACAAATGTGTACGA
TCCTACTGATTACAAGGAGAGAAATAGAATTTGGCCACAATTAGCTTCCTCTCCGAAGAATTTAGGAAAGATTTCCTATGGGAAGATTTACAAAAGGAATGAAGAAATTC
AACAAGTTCGTAGCCGAATCAAAATTGCTAGAAATTCTCCTTACAAACGGCAAGTTTACTTGGTCAAGAAAGGAAGATCTCCAATGAATGGGATGAAACATTTGAAAATT
CTAGAGTTTCAAGATAATCAAGAGTCTTCTCATATCATTTTCCAATCCTTTTGGAATCTGGTTCTGTTGAGTGGGATAATTGAAAGATCACCAAACGACATTAGTGGTCA
AGGTTGGGCTGGTTTTGTTTTAATTTCCAGATTGAGAAATCTGAAATTGATCCTAAAGAAGTGGCATGCTGAAAATGAAAAGAATCATAAAAGAAAGGAGAAGGACTTAT
TGGAGGAGATAGATAAAGAAGATTTACAGATAGAAAATGCAGAATTAACATCGGTAGAGTTGGACTTGAGATCAACATCGAAAGTTGACCTACTATCCCTTTACAGAATG
GAACAAATGAATTTAATACAAAAATGCAAGCTCAATTGGCTGAAATTGGGAGATGATAATACGAAATTCTTTCACCGGTTCCTTGCTGCAAAAAAGAGACATAACTTAAT
CTTCAAACTCATCGATGACCAAAATAAGTCTACCAACTCTTTCCGTGACATTGAGTCTATTATCTTGAATTCTCTTAACTCTAAGCTCCATAACGCAGATTCATTTCCAG
CCAACATAGAATGGAACATGGTTTCCGAGGCCCAAAATAATTGGCTCATATCACGGTTGACCCTGATAAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTAATAAGAAATCTGTCGTTGGAATATGGAACAGAGCCACCTTTGGAGCTATCAGCTCCCACTTTGGAGGTTTGGAAGAAATAGCATTAAAGACACTTAATCT
TTTGAATGTATCAAAAGCCAAAATCAAAGTCAAAAGAAATTTATGTGGATTTATACCTGCATCAATTGAAATTAAAAATGAATTGAGAGGTTCTATATTTTTAAACTTTG
GGGATGTTGAAGCCATGGAAGCTCCTTCTTACGTACAAAAAGAATTATTTTTTAAAGATTTCAATAACCCAATCGATCAATGTCGTTTGAATAAAGTAGCTGAGGATGAA
GATGTTAGTTGTATTTTATCAAGCTGCAATAGAAAAGACCGAAATGTGATCTTATCGTCGGAGAAGACATCGGAAGTGTCTGAGCTCGATGAAGATGCTGAGCCTGCGTC
AAAGAAGACCAATGGTCATTTTCAAATCAAAAGTGTGCCAATCCAAGTCAGCAGCCACAAGTGGAAAAGACTAATTCGGGCGAAGTTCAAAAGACGACAGACTATCAAAA
GCTGGGCTCTTCATTGCCTCTTGGCTTTTGGTATTCCGATTTTATTTTTTAATGAGGAAGAGCAACAAATGTTTTTTTCCCAAGAAAGAAAAGCCACTACTCCTATTCGA
AAAGCCACGCCGACATCATTAAAAAAGAGACCTCACATCTTCAAGCCATTCCCAAAAGTCTATGTTAGGCGAAGGAATTCCCTTTACAACCATTGGTCTGCCTTAGCAAA
TACAGATCTGCTTGAGGAAAGCTGTGCAAAAATCCTTGTCCAGACACCTGCCCTTACAGGCTCATTAAATCAAGTTGATTCTCGACCAAGATCAGAGCATTTGGACTCGG
AAGTCGAGTCAATAGTTAGTGCAAGTAGTGAGGAAATTGAGCAATGTGATCCTGAGGAGCATCAAGAAAAGATTGCAACAATCGAATCATATGGAAAAGACATTGTCAAG
AAGTGTGATGGATATTCATTGAAGCCTATGGAAAATCTGGAGGCATACTTACTATGTGGGATGAGAGCAAATTATCAGTTAAAGAGCTGTTGGGTGACAAATGTGTACGA
TCCTACTGATTACAAGGAGAGAAATAGAATTTGGCCACAATTAGCTTCCTCTCCGAAGAATTTAGGAAAGATTTCCTATGGGAAGATTTACAAAAGGAATGAAGAAATTC
AACAAGTTCGTAGCCGAATCAAAATTGCTAGAAATTCTCCTTACAAACGGCAAGTTTACTTGGTCAAGAAAGGAAGATCTCCAATGAATGGGATGAAACATTTGAAAATT
CTAGAGTTTCAAGATAATCAAGAGTCTTCTCATATCATTTTCCAATCCTTTTGGAATCTGGTTCTGTTGAGTGGGATAATTGAAAGATCACCAAACGACATTAGTGGTCA
AGGTTGGGCTGGTTTTGTTTTAATTTCCAGATTGAGAAATCTGAAATTGATCCTAAAGAAGTGGCATGCTGAAAATGAAAAGAATCATAAAAGAAAGGAGAAGGACTTAT
TGGAGGAGATAGATAAAGAAGATTTACAGATAGAAAATGCAGAATTAACATCGGTAGAGTTGGACTTGAGATCAACATCGAAAGTTGACCTACTATCCCTTTACAGAATG
GAACAAATGAATTTAATACAAAAATGCAAGCTCAATTGGCTGAAATTGGGAGATGATAATACGAAATTCTTTCACCGGTTCCTTGCTGCAAAAAAGAGACATAACTTAAT
CTTCAAACTCATCGATGACCAAAATAAGTCTACCAACTCTTTCCGTGACATTGAGTCTATTATCTTGAATTCTCTTAACTCTAAGCTCCATAACGCAGATTCATTTCCAG
CCAACATAGAATGGAACATGGTTTCCGAGGCCCAAAATAATTGGCTCATATCACGGTTGACCCTGATAAAGCCTTGA
Protein sequenceShow/hide protein sequence
MVGNKKSVVGIWNRATFGAISSHFGGLEEIALKTLNLLNVSKAKIKVKRNLCGFIPASIEIKNELRGSIFLNFGDVEAMEAPSYVQKELFFKDFNNPIDQCRLNKVAEDE
DVSCILSSCNRKDRNVILSSEKTSEVSELDEDAEPASKKTNGHFQIKSVPIQVSSHKWKRLIRAKFKRRQTIKSWALHCLLAFGIPILFFNEEEQQMFFSQERKATTPIR
KATPTSLKKRPHIFKPFPKVYVRRRNSLYNHWSALANTDLLEESCAKILVQTPALTGSLNQVDSRPRSEHLDSEVESIVSASSEEIEQCDPEEHQEKIATIESYGKDIVK
KCDGYSLKPMENLEAYLLCGMRANYQLKSCWVTNVYDPTDYKERNRIWPQLASSPKNLGKISYGKIYKRNEEIQQVRSRIKIARNSPYKRQVYLVKKGRSPMNGMKHLKI
LEFQDNQESSHIIFQSFWNLVLLSGIIERSPNDISGQGWAGFVLISRLRNLKLILKKWHAENEKNHKRKEKDLLEEIDKEDLQIENAELTSVELDLRSTSKVDLLSLYRM
EQMNLIQKCKLNWLKLGDDNTKFFHRFLAAKKRHNLIFKLIDDQNKSTNSFRDIESIILNSLNSKLHNADSFPANIEWNMVSEAQNNWLISRLTLIKP