; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G001054 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G001054
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionNDR1/HIN1-like protein 6
Genome locationCG_Chr05:1174905..1175363
RNA-Seq ExpressionClCG05G001054
SyntenyClCG05G001054
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048921.1 protein YLS9 isoform X1 [Cucumis melo var. makuwa]1.1e-6989.47Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV++AAGEGTRTELGS IVPSFIQS+ENTTSLKIET+V+NE VDDGAGR LNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVV+GRRMPPVKIEVTCG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

KGN56498.2 hypothetical protein Csa_009859 [Cucumis sativus]4.5e-7191.45Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV+IAAGEGTRTELGS IVPSFIQS+ENTTSLKIET+VSNE VDDGAGRNLNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVVDGRRMPPVKIEV+CG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

XP_008437954.2 PREDICTED: uncharacterized protein LOC103483219 [Cucumis melo]1.1e-6989.47Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV++AAGEGTRTELGS IVPSFIQS+ENTTSLKIET+V+NE VDDGAGR LNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVV+GRRMPPVKIEVTCG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

XP_011650715.1 NDR1/HIN1-like protein 6 isoform X2 [Cucumis sativus]4.5e-7191.45Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV+IAAGEGTRTELGS IVPSFIQS+ENTTSLKIET+VSNE VDDGAGRNLNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVVDGRRMPPVKIEV+CG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

XP_031737695.1 NDR1/HIN1-like protein 6 isoform X1 [Cucumis sativus]4.5e-7191.45Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV+IAAGEGTRTELGS IVPSFIQS+ENTTSLKIET+VSNE VDDGAGRNLNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVVDGRRMPPVKIEV+CG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

TrEMBL top hitse value%identityAlignment
A0A0A0L3Z7 LEA_2 domain-containing protein2.2e-7191.45Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV+IAAGEGTRTELGS IVPSFIQS+ENTTSLKIET+VSNE VDDGAGRNLNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVVDGRRMPPVKIEV+CG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

A0A1S3AV73 uncharacterized protein LOC1034832195.4e-7089.47Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV++AAGEGTRTELGS IVPSFIQS+ENTTSLKIET+V+NE VDDGAGR LNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVV+GRRMPPVKIEVTCG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

A0A5A7U5Q0 Protein YLS9 isoform X15.4e-7089.47Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV++AAGEGTRTELGS IVPSFIQS+ENTTSLKIET+V+NE VDDGAGR LNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVV+GRRMPPVKIEVTCG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

A0A5D3D146 Protein YLS9 isoform X15.4e-7089.47Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV
        +S FNVTDKSDGSYLNAKTIGRIEIKNPNS+LSLNYGDIEV++AAGEGTRTELGS IVPSFIQS+ENTTSLKIET+V+NE VDDGAGR LNSGNRTG LV
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLV

Query:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        VNVEART IGFVV+GRRMPPVKIEVTCG VSLKRLDRGN+PKCSIHLRRWFL
Subjt:  VNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

A0A6J1D054 NDR1/HIN1-like protein 61.9e-6279.87Show/hide
Query:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEI--AAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGV
        +S FNVTDK DGSYL+AKTIGRIE+KNPNS+LSLNYGDIEVEI   AGEG RTELGST VP F+QSKENTTSLK+ET VSNE+VD GAGR LNSGNRTG 
Subjt:  MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEI--AAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGV

Query:  LVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
        LVVNV ART +GF+VDGRR+PPVKIEVTCGGV+L+ L RG++PKCSIHLR+WFL
Subjt:  LVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01453.1 unknown protein2.5e-1936.36Show/hide
Query:  MSTFNVTD-KSDG--SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGE-GTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT
        +S FN +D KSD   S+L+A T   ++ +NPN +L+  YGD +V +  GE    T L ST V  FI+   N T++ + T V    VDD   + L    ++
Subjt:  MSTFNVTD-KSDG--SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGE-GTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT

Query:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW
          L+V V A+T +G  V  R++  V + + CGGV L+ LD   M +C+I + +W
Subjt:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW

AT1G01453.2 unknown protein8.7e-2035.9Show/hide
Query:  MSTFNVTD-KSDG--SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGE-GTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT
        +S FN +D KSD   S+L+A T   ++ +NPN +L+  YGD +V +  GE    T L ST V  FI+   N T++ + T V    VDD   + L    ++
Subjt:  MSTFNVTD-KSDG--SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGE-GTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT

Query:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL
          L+V V A+T +G  V  R++  V + + CGGV L+ LD   M +C+I + +W++
Subjt:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL

AT2G46300.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.0e-2537.84Show/hide
Query:  FNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGT-RTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLVVN
        F + D  DG+ L+A  + R+E+KNPNS+L   YG+  V+++ G G   T +G T +  F Q  +N+TS+K+ET V N++V+ G  + L +  ++  LV+N
Subjt:  FNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGT-RTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLVVN

Query:  VEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW
        V A+T +G  V G ++  + + + CGGVSL +LD  + PKC ++  +W
Subjt:  VEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW

AT4G01110.1 unknown protein4.3e-1934.42Show/hide
Query:  MSTFNVTDKSDG---SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGT-RTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT
        +S FN +    G   S L A+   R++ +NPN +L   YG+++V ++ GE    T LGST V  F++   N T + +   V  + VDD   + L +  ++
Subjt:  MSTFNVTDKSDG---SYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGT-RTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRT

Query:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW
          LVV V A+T +G  V  R++  V + ++CGGV L+ LD   M KC+I + +W
Subjt:  GVLVVNVEARTTIGFVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACATTCAACGTCACCGACAAATCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGAATCGAAATCAAGAACCCTAACTCGAGGTTATCACTAAATTACGG
CGATATCGAGGTTGAAATTGCCGCTGGAGAAGGTACTCGTACCGAATTAGGATCGACGATCGTGCCGAGTTTTATTCAATCGAAGGAGAACACGACGAGTTTGAAGATCG
AAACAGTGGTCAGCAACGAAATAGTTGACGACGGAGCGGGCCGGAACCTGAACTCCGGCAACCGGACCGGAGTGCTGGTGGTGAATGTCGAAGCACGTACGACAATCGGA
TTCGTGGTGGATGGCCGGAGAATGCCGCCGGTGAAGATCGAAGTGACGTGCGGAGGTGTGAGCTTGAAACGTCTTGACAGAGGCAATATGCCGAAATGCTCCATTCATTT
GCGCAGATGGTTTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACATTCAACGTCACCGACAAATCGGACGGCTCGTATTTAAACGCCAAAACAATCGGTCGAATCGAAATCAAGAACCCTAACTCGAGGTTATCACTAAATTACGG
CGATATCGAGGTTGAAATTGCCGCTGGAGAAGGTACTCGTACCGAATTAGGATCGACGATCGTGCCGAGTTTTATTCAATCGAAGGAGAACACGACGAGTTTGAAGATCG
AAACAGTGGTCAGCAACGAAATAGTTGACGACGGAGCGGGCCGGAACCTGAACTCCGGCAACCGGACCGGAGTGCTGGTGGTGAATGTCGAAGCACGTACGACAATCGGA
TTCGTGGTGGATGGCCGGAGAATGCCGCCGGTGAAGATCGAAGTGACGTGCGGAGGTGTGAGCTTGAAACGTCTTGACAGAGGCAATATGCCGAAATGCTCCATTCATTT
GCGCAGATGGTTTCTGTAA
Protein sequenceShow/hide protein sequence
MSTFNVTDKSDGSYLNAKTIGRIEIKNPNSRLSLNYGDIEVEIAAGEGTRTELGSTIVPSFIQSKENTTSLKIETVVSNEIVDDGAGRNLNSGNRTGVLVVNVEARTTIG
FVVDGRRMPPVKIEVTCGGVSLKRLDRGNMPKCSIHLRRWFL