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ClCG05G002880 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G002880
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptionprotein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic
Genome locationCG_Chr05:2771660..2772136
RNA-Seq ExpressionClCG05G002880
SyntenyClCG05G002880
Gene Ontology termsGO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0009941 - chloroplast envelope (cellular component)
GO:0070300 - phosphatidic acid binding (molecular function)
InterPro domainsIPR044160 - Protein TRIGALACTOSYLDIACYLGLYCEROL 4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049109.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4 [Cucumis melo var. makuwa]8.2e-2977.91Show/hide
Query:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        R WVGLVGQFRPKKLIS +KA+LS  D  EL  LKDVAR  LDKS YTYG+CSQFSPSPFSSVYVSTE HGERKG RHKAMFY ++
Subjt:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

XP_004133963.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic isoform X1 [Cucumis sativus]1.8e-2877.38Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        W GLVGQFRPKKLISSIKA++SA + LEL  LKD+A  FLDKSLYTYG+CSQFS  PFSSVYVSTE  GERKGHRHKAMFY ++
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

XP_008438274.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Cucumis melo]8.2e-2977.91Show/hide
Query:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        R WVGLVGQFRPKKLIS +KA+LS  D  EL  LKDVAR  LDKS YTYG+CSQFSPSPFSSVYVSTE HGERKG RHKAMFY ++
Subjt:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

XP_022146920.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Momordica charantia]1.4e-3388.1Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        WVGLVGQFRPKKLISSIKAELSA DSLELPVLKDVA QFLDKSLYTYGLCSQFSPSPFSS++ STE HGE+KG RHKAMFY K+
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

XP_038875801.1 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Benincasa hispida]5.3e-3692.86Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        WVGL+GQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSP+PFSSVYVSTE HGERKG RHKAMFY K+
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

TrEMBL top hitse value%identityAlignment
A0A0A0L4I9 Uncharacterized protein8.9e-2977.38Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        W GLVGQFRPKKLISSIKA++SA + LEL  LKD+A  FLDKSLYTYG+CSQFS  PFSSVYVSTE  GERKGHRHKAMFY ++
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

A0A1S3AWM5 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic4.0e-2977.91Show/hide
Query:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        R WVGLVGQFRPKKLIS +KA+LS  D  EL  LKDVAR  LDKS YTYG+CSQFSPSPFSSVYVSTE HGERKG RHKAMFY ++
Subjt:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

A0A5D3D2D9 Protein TRIGALACTOSYLDIACYLGLYCEROL 44.0e-2977.91Show/hide
Query:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        R WVGLVGQFRPKKLIS +KA+LS  D  EL  LKDVAR  LDKS YTYG+CSQFSPSPFSSVYVSTE HGERKG RHKAMFY ++
Subjt:  RTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

A0A6J1CYP7 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic7.0e-3488.1Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        WVGLVGQFRPKKLISSIKAELSA DSLELPVLKDVA QFLDKSLYTYGLCSQFSPSPFSS++ STE HGE+KG RHKAMFY K+
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

A0A6J1IIJ0 protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic-like isoform X11.9e-2666.67Show/hide
Query:  MHSLIVAFYRT--WVGLVGQFRPKKLISSIKAEL-SAADSLE-LPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV
        + SL++ F     WVGLVGQFRPKK+IS+IK +L S  D+LE LP LKDVA  FLDK+LY+YGLCSQFSP+PFSSV+ STE HG+RKG RHKAMFY ++
Subjt:  MHSLIVAFYRT--WVGLVGQFRPKKLISSIKAEL-SAADSLE-LPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G44640.1 FUNCTIONS IN: molecular_function unknown5.0e-1649.37Show/hide
Query:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAM
        W+GLVGQF+PKKL + IKA++S A+  +L V+KD A+  +DKSLY+ GL +Q +    SS+ +STE  G++ G R+K M
Subjt:  WVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCACTAATTGTGGCCTTCTATCGCACGTGGGTTGGATTGGTTGGCCAATTTCGTCCAAAGAAACTGATATCTTCAATAAAAGCCGAACTTTCTGCTGCGGACAG
CCTTGAGCTCCCTGTCTTGAAAGACGTTGCTAGACAGTTTCTGGACAAGTCGCTCTATACATATGGACTATGCTCTCAGTTTTCTCCTAGTCCATTTTCATCTGTATATG
TCAGCACAGAAGGGCATGGTGAGAGGAAAGGGCATCGCCACAAGGCGATGTTTTATCAAAAGGTCAGCATTGTAGTCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTCACTAATTGTGGCCTTCTATCGCACGTGGGTTGGATTGGTTGGCCAATTTCGTCCAAAGAAACTGATATCTTCAATAAAAGCCGAACTTTCTGCTGCGGACAG
CCTTGAGCTCCCTGTCTTGAAAGACGTTGCTAGACAGTTTCTGGACAAGTCGCTCTATACATATGGACTATGCTCTCAGTTTTCTCCTAGTCCATTTTCATCTGTATATG
TCAGCACAGAAGGGCATGGTGAGAGGAAAGGGCATCGCCACAAGGCGATGTTTTATCAAAAGGTCAGCATTGTAGTCATCTAA
Protein sequenceShow/hide protein sequence
MHSLIVAFYRTWVGLVGQFRPKKLISSIKAELSAADSLELPVLKDVARQFLDKSLYTYGLCSQFSPSPFSSVYVSTEGHGERKGHRHKAMFYQKVSIVVI