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ClCG05G003010 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G003010
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptioncytochrome c oxidase-assembly factor COX23, mitochondrial
Genome locationCG_Chr05:2889591..2892831
RNA-Seq ExpressionClCG05G003010
SyntenyClCG05G003010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049122.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]3.2e-0693.75Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDPAPPYA+AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

XP_004133972.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus]3.5e-0587.5Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDP PPY +AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

XP_022147041.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Momordica charantia]6.0e-0587.5Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS +RD APPYA+AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

XP_022924627.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata]7.8e-0584.38Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDP+PPY +AARISDSPC+PQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

XP_038906947.1 cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]1.2e-0554.93Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLKSQRRAN------------VKNILMFTRNARRKRMRSVSF
        MAS SRDPAPPYA+AARISDSPCYPQYSASLK     N             K      R AR +R R+ SF
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLKSQRRAN------------VKNILMFTRNARRKRMRSVSF

TrEMBL top hitse value%identityAlignment
A0A0A0L4K5 CHCH domain-containing protein1.7e-0587.5Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDP PPY +AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

A0A5A7U004 Cytochrome c oxidase-assembly factor COX231.5e-0693.75Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDPAPPYA+AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

A0A6J1D157 cytochrome c oxidase-assembly factor COX23, mitochondrial2.9e-0587.5Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS +RD APPYA+AARISDSPCYPQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

A0A6J1E9H8 cytochrome c oxidase-assembly factor COX23, mitochondrial3.8e-0584.38Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDP+PPY +AARISDSPC+PQYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

A0A6J1ITM4 cytochrome c oxidase-assembly factor COX23, mitochondrial9.3e-0481.25Show/hide
Query:  MASASRDPAPPYATAARISDSPCYPQYSASLK
        MAS SRDP PPY +AARISDSPC+ QYSASLK
Subjt:  MASASRDPAPPYATAARISDSPCYPQYSASLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTCTAGGGATCCGGCTCCGCCGTATGCCACTGCTGCTAGAATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATCTCAGAGAAGAGC
AAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGAATGAGATCTGTCTCCTTTACAGCGGGAAGCTCGATTGGAACGCAACAAGAAACGGTCTTTC
TTCTCATGAAATTATCTTCAGGCGTGTTTATTGATGTTGAAGCTATAATCACGCTTAACCCTAGGGCTTTAAGTGGTCAAGAATTTACGACAGCAGCTGAGATTTCTACT
TCATTATGGACGGACTTTGGCCTGGCCATTGATACCTTATAA
mRNA sequenceShow/hide mRNA sequence
TCAGGCAGCCATTTTAACCGACCTCTATTTTTCACCGAGACAGAGTGAGCTTTTCCGCCATGGCTTCCGCTTCTAGGGATCCGGCTCCGCCGTATGCCACTGCTGCTAGA
ATTTCCGATTCTCCTTGTTATCCTCAGTACAGCGCTTCCCTGAAATCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAGAAAGAGAAT
GAGATCTGTCTCCTTTACAGCGGGAAGCTCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCATGAAATTATCTTCAGGCGTGTTTATTGATGTTGAAGCTATAATCA
CGCTTAACCCTAGGGCTTTAAGTGGTCAAGAATTTACGACAGCAGCTGAGATTTCTACTTCATTATGGACGGACTTTGGCCTGGCCATTGATACCTTATAA
Protein sequenceShow/hide protein sequence
MASASRDPAPPYATAARISDSPCYPQYSASLKSQRRANVKNILMFTRNARRKRMRSVSFTAGSSIGTQQETVFLLMKLSSGVFIDVEAIITLNPRALSGQEFTTAAEIST
SLWTDFGLAIDTL