CuGenDBv2

Gene ID	ClCG05G003340
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	60S ribosomal protein L13a, putative
Genome location	CG_Chr05:3171772..3174339
RNA-Seq Expression	ClCG05G003340
Synteny	ClCG05G003340
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004133995.1 60S ribosomal protein L13a-2 [Cucumis sativus]

3.7e-104

86.08

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

XP_022147118.1 60S ribosomal protein L13a-4-like [Momordica charantia]

2.8e-104

85.65

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQL+VIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

XP_022924796.1 60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata]

4.9e-104

85.23

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVV+DARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

XP_023521847.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]

1.8e-103

85.65

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YEKKKQL KLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

XP_038878195.1 60S ribosomal protein L13a-4-like [Benincasa hispida]

4.1e-103

85.23

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYC LGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAY KKKQLTKLRVKAEKVADEKLGP+LQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L439 Uncharacterized protein

1.8e-104

86.08

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

A0A1S3AW63 60S ribosomal protein L13a-2-like

1.8e-104

86.08

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

A0A5A7U034 60S ribosomal protein L13a-4

1.8e-104

86.08

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

A0A6J1D0E7 60S ribosomal protein L13a-4-like

1.4e-104

85.65

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQL+VIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

A0A6J1EAG0 60S ribosomal protein L13a-4-like isoform X1

2.4e-104

85.23

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVV+DARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELERKRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

1.9e-90

72.57

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRLASI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIK                               ELE+KRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        Q  YE+KKQL KLRVKAE+VA EKLG QL ++AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Q9FKC0 60S ribosomal protein L13a-4

4.1e-98

77.64

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
           YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Q9LRX8 60S ribosomal protein L13a-2

7.1e-98

78.48

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YE+KKQLTKLR KAEKVA+EKLG QL V+A IKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Q9SFU1 60S ribosomal protein L13a-1

1.6e-97

76.37

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Q9SVR0 60S ribosomal protein L13a-3

3.0e-96

75.95

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        Q  YE+KKQL KLR KAEKVA+E+LG QL V+AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

1.1e-98

76.37

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

AT3G07110.2 Ribosomal protein L13 family protein

1.5e-98

76.37

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YE+KKQL+KLR KAEKVA+EKLG QL V+AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

5.0e-99

78.48

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKER+
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
        QA YE+KKQLTKLR KAEKVA+EKLG QL V+A IKY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

2.9e-99

77.64

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
           YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

2.9e-99

77.64

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK                               ELE KRKERA
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERA

Query:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY
           YE+KKQL KLRVKAEKVA+EKLG QL ++AP+KY
Subjt:  QAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Sequences

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CDS sequence

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ATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCATCACATGCTCGGGAGGCTTGCTTCGATCATAGCTAAGGAACTTCTCAATGGCCAGAA
GGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGCATGAATACCAAACCCTCTCATG
GACCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCCCGATTGAAGGCATAT
GAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCCGATGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTC
ATCAGAAGTGGGATGGAACCACTACGACACTATCAAGGTAGGCATTAAGATTGATGAATCTATACCATTCCACAAGGTTTCTGTTCACAAATTCTATCGGCCAACGCTAT
TAAATCAACATATTGCCATAGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACTAAGTTGAGGGTTAAAGCTGAGAAGGTT
GCAGACGAGAAGCTTGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAG

mRNA sequence

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CCTAGCTGCTCGCTGAGACTGAGAGAGTAGCCGCTGAACCAAAAATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCATCACATGCTCGGG
AGGCTTGCTTCGATCATAGCTAAGGAACTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTA
CATGAGGTTCTTGAGGAAGCGCATGAATACCAAACCCTCTCATGGACCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACA
AGACAAAGCGTGGAGCTGCTGCTCTTGCCCGATTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCCGATGCTCTCAAGGTTTTG
AGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTACGACACTATCAAGGTAGGCATTAAGATTGATGAATCTATACC
ATTCCACAAGGTTTCTGTTCACAAATTCTATCGGCCAACGCTATTAAATCAACATATTGCCATAGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGA
AGAAGAAGCAGTTGACTAAGTTGAGGGTTAAAGCTGAGAAGGTTGCAGACGAGAAGCTTGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAGTTTGTTTGCGAG
ATTTGTGTTGAGTGAGAATGCTTAATGTTATGGAGTTGCAGTTGAATTTACATTTTGCATTTTCTTTTTTAGTACCATTTTGTTGTCTATTGATGTTGGTCGCCATTTTT
CTTATCCTTTTTTCTTCGGATTTTGAAATTAGATAAATTTTGGGGATCACTTATTATTCCTTATTCTACTCTACTTCAATAGATCTCATACCCTGAAAATTTGTTATATT
TGACATGAATGTGTCTTTGAATGGACCACGCCCATTCGTCAAA

Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKVGIKIDESIPFHKVSVHKFYRPTLLNQHIAIELERKRKERAQAAYEKKKQLTKLRVKAEKV
ADEKLGPQLQVIAPIKY

ClCG05G003340 (gene) of Watermelon (Charleston Gray) v2.5 genome