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ClCG05G003760 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G003760
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:3518788..3519279
RNA-Seq ExpressionClCG05G003760
SyntenyClCG05G003760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI37230.3 unnamed protein product, partial [Vitis vinifera]2.6e-0751.22Show/hide
Query:  VIRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTCSIIPNQYAIPPNAKSAIPISSPPKNFLFPPSNPHSSTVLSIS
        +I   SGR SLITG +L     A  RGN S+S +FTP   S++ +  AI P A SA PISSPPKNF  P   P SS +LS S
Subjt:  VIRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTCSIIPNQYAIPPNAKSAIPISSPPKNFLFPPSNPHSSTVLSIS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATTTTTTTTTATTTTTTATTTTTTTTTTTTTAAATTGCAGCAGTTGCTCCCTCCGGCGCCGGAAAGCCGCCGTCATTAGGTTCCAATCCGGCAGATTATCTCT
GATCACCGGCGCTTCCCTGAATCTTCCAGCCCAAGCATACACCCGAGGGAACTCATCGGCGTCCAACACTTTCACTCCCGTCACTTGTTCAATCATTCCCAACCAATACG
CAATCCCGCCGAACGCCAAATCCGCCATTCCGATCTCATCTCCGCCGAAAAATTTCCTTTTTCCGCCGTCGAATCCCCATTCCTCGACGGTTCTCAGCATCTCCAAGCTC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATTTTTTTTTATTTTTTATTTTTTTTTTTTTAAATTGCAGCAGTTGCTCCCTCCGGCGCCGGAAAGCCGCCGTCATTAGGTTCCAATCCGGCAGATTATCTCT
GATCACCGGCGCTTCCCTGAATCTTCCAGCCCAAGCATACACCCGAGGGAACTCATCGGCGTCCAACACTTTCACTCCCGTCACTTGTTCAATCATTCCCAACCAATACG
CAATCCCGCCGAACGCCAAATCCGCCATTCCGATCTCATCTCCGCCGAAAAATTTCCTTTTTCCGCCGTCGAATCCCCATTCCTCGACGGTTCTCAGCATCTCCAAGCTC
TGA
Protein sequenceShow/hide protein sequence
MFDFFLFFIFFFLNCSSCSLRRRKAAVIRFQSGRLSLITGASLNLPAQAYTRGNSSASNTFTPVTCSIIPNQYAIPPNAKSAIPISSPPKNFLFPPSNPHSSTVLSISKL