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ClCG05G004080 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G004080
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationCG_Chr05:3763551..3765149
RNA-Seq ExpressionClCG05G004080
SyntenyClCG05G004080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3786.32Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAA GEVG+H NGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]7.1e-3892.47Show/hide
Query:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDSK VNG KEKTMDSAA GEVG+HSNGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_022924268.1 uncharacterized protein LOC111431793 [Cucurbita moschata]2.7e-3786.32Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAA GEVG+H NGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_022979377.1 uncharacterized protein LOC111479120 [Cucurbita maxima]1.3e-3685.26Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAA GEVG+H N EDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]3.7e-3992.63Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        MDGDSK VNG KEK MDSAATGEVG+HSNGE+ SESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein3.4e-3892.47Show/hide
Query:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        GDSK VNG KEKTMDSAA GEVG+HSNGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
Subjt:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X21.1e-3692.31Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSK VNG KEKTMDSAA GEVG+HSNGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A5A7U1V8 Uncharacterized protein1.1e-3692.31Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
        MDGDSK VNG KEKTMDSAA GEVG+HSNGE+ SESNALLPPRRGGMSRK NKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCS
A0A6J1EBY1 uncharacterized protein LOC1114317931.3e-3786.32Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAA GEVG+H NGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791206.4e-3785.26Show/hide
Query:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        M GDS+ VNG  E+++DSAA GEVG+H N EDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEE+DSCSC+IM
Subjt:  MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein5.4e-0446.67Show/hide
Query:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWNDSNGNNLAEILEFQPSDVSDSGDE----EADSCSCIIM
AT1G55475.1 unknown protein5.4e-0444.19Show/hide
Query:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   +   +C CII+
Subjt:  KPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
AT2G33390.1 unknown protein3.0e-1847.31Show/hide
Query:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM
        G+ K  NG + K + S  + E+ +    E++SES  LLPPR+GGMSR ++K +  V+WND  G+NLAE+L ++PS+VSD+ D+++DSC C IM
Subjt:  GDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTGATTCTAAGGTTGTTAATGGGCGTAAAGAGAAGACTATGGACTCTGCGGCTACCGGCGAAGTTGGGAATCACAGTAACGGTGAAGATGACAGTGAATCGAA
TGCCCTATTGCCGCCGCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGATAGTAATGGTAATAACCTAGCGGAGATTTTGGAGT
TTCAACCGAGTGATGTGAGCGACTCTGGGGACGAGGAGGCTGACTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTCATGGGGCTGTTGGGTTCATAAATTTTGAACCCGTGAGCGTTGACCCAGTTGCGGAATCGGAGTTTTGAGTGGCTGAATTGTGAGAAATTTTCATTTTCCTTT
TCTTGGGGTTTAGATGGAGTGGATTTCTGAGATGATTCGATTCAGAAATCCGAAATCAGGGTCCGATTTTTGGTGTAGTTGATAGGGTAAATTTCCGATTGGATTTGTAG
TTAGTGAGAGTTTCGAACTATGGATGGTGATTCTAAGGTTGTTAATGGGCGTAAAGAGAAGACTATGGACTCTGCGGCTACCGGCGAAGTTGGGAATCACAGTAACGGTG
AAGATGACAGTGAATCGAATGCCCTATTGCCGCCGCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGAATGATAGTAATGGTAATAAC
CTAGCGGAGATTTTGGAGTTTCAACCGAGTGATGTGAGCGACTCTGGGGACGAGGAGGCTGACTCTTGCAGCTGTATAATTATGTAGATTATTACATCAACTATTAGTAT
ATAATGACAAGAACAATGTGGTTGCTTTAAGACTAAACTGATAATAATTGGAGATGTTTCTGACTGTATACCGGATTGCTTTGCTACTACGACGACTGGCAGAAAAGCTC
AAAGATCGGATGATTAACATGTCGTTGCACCTTGCGGTTTCTGACGATGCGTCCCTGTGACATCTTGTACTGTTTCAGTTTTTTCGAATTTGTAAGATCACTTCCCAGGT
GATATACTATATGGATGATGCTGATATTGATATTATTAAATCAAACATTCAGATTAGTTGAGCTTTTGACAGTGCAAATGAAACATTGTGTAATGCAAAC
Protein sequenceShow/hide protein sequence
MDGDSKVVNGRKEKTMDSAATGEVGNHSNGEDDSESNALLPPRRGGMSRKSNKPRMKVRWNDSNGNNLAEILEFQPSDVSDSGDEEADSCSCIIM