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ClCG05G004450 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G004450
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:4183690..4185291
RNA-Seq ExpressionClCG05G004450
SyntenyClCG05G004450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI23584.3 unnamed protein product, partial [Vitis vinifera]2.9e-0532.32Show/hide
Query:  ISIPIPPRQLLPKPHCRLHDAVLPVVCRVCYPHPHRRLTSHFHPPQEHIPPHRTRPDLGLGQRHEVVRESGTQVQLAHSWESAKSRPAAAAWPGRAATVG
        +++P    QLL + H  LH A+  VV R+  PHPHR L  H    Q HI       D GL   HE                     PAA           
Subjt:  ISIPIPPRQLLPKPHCRLHDAVLPVVCRVCYPHPHRRLTSHFHPPQEHIPPHRTRPDLGLGQRHEVVRESGTQVQLAHSWESAKSRPAAAAWPGRAATVG

Query:  IGKQRSWARRGLKIWIMWLRRFRAADREEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTR
              WA                         QGRS+PLEKNLPW VVMR EPG   +S F R
Subjt:  IGKQRSWARRGLKIWIMWLRRFRAADREEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTR
XP_042942924.1 uncharacterized protein LOC122277109 [Carya illinoinensis]1.1e-0441.3Show/hide
Query:  AATVGIGKQRSWARRGLKIWIMWLRRFRAADREEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTRDRALRMEFIKDGLSQCWWLPVRV
        AA VGIG +RS    GLK   MW    R  + + A   Q RS PLEKNLPW V++R E   A    + R   + M  +  GL +C   PV V
Subjt:  AATVGIGKQRSWARRGLKIWIMWLRRFRAADREEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTRDRALRMEFIKDGLSQCWWLPVRV
TrEMBL top hitse value%identityAlignment
A0A0A0L773 Uncharacterized protein8.5e-2781.01Show/hide
Query:  EEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTRDRALRMEFIKDGLSQCWWLPVRVSMNSFPRFSTLHIFETKVS
        EEAERI GRSRPLEKNLPW+VV+RTEPGEA ASA T DRAL MEFIKDG SQC WLPV V MNSFPRFS LHIF  K+S
Subjt:  EEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTRDRALRMEFIKDGLSQCWWLPVRVSMNSFPRFSTLHIFETKVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTTGAAGAAATGCTTCGGTCAAAGCTTAGAAATTGTTATGACCTTGGGGGCATCTCCATCCCAATTCCTCCCCGCCAGCTCCTCCCCAAGCCGCACTGC
CGCCTCCATGACGCCGTCCTCCCCGTGGTGTGCAGAGTTTGCTATCCCCATCCTCACCGCCGCCTCACCTCTCACTTTCATCCCCCTCAAGAACACATCCCGCCT
CACCGAACTCGACCCGATCTTGGACTTGGCCAGCGCCATGAAGTAGTCCGGGAGAGTGGCACCCAAGTCCAGCTCGCTCATTCATGGGAGAGCGCCAAGAGCAGG
CCAGCGGCAGCGGCATGGCCTGGGAGGGCGGCCACGGTGGGTATAGGGAAACAGAGGAGCTGGGCCAGGAGGGGCTTGAAAATCTGGATCATGTGGTTGAGGCGG
TTTCGGGCGGCGGATAGGGAGGAAGCGGAGAGGATCCAGGGGAGATCGAGGCCGTTGGAGAAGAATTTGCCTTGGGAAGTTGTGATGAGAACCGAGCCAGGGGAG
GCTCCGGCTTCGGCCTTCACTAGGGACAGAGCTTTGAGGATGGAATTTATTAAGGATGGGTTGAGCCAGTGCTGGTGGTTGCCGGTTAGAGTTAGTATGAACAGC
TTCCCGCGCTTCTCAACGCTGCACATTTTCGAAACGAAGGTTTCAACAATTGTCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTTGAAGAAATGCTTCGGTCAAAGCTTAGAAATTGTTATGACCTTGGGGGCATCTCCATCCCAATTCCTCCCCGCCAGCTCCTCCCCAAGCCGCACTGC
CGCCTCCATGACGCCGTCCTCCCCGTGGTGTGCAGAGTTTGCTATCCCCATCCTCACCGCCGCCTCACCTCTCACTTTCATCCCCCTCAAGAACACATCCCGCCT
CACCGAACTCGACCCGATCTTGGACTTGGCCAGCGCCATGAAGTAGTCCGGGAGAGTGGCACCCAAGTCCAGCTCGCTCATTCATGGGAGAGCGCCAAGAGCAGG
CCAGCGGCAGCGGCATGGCCTGGGAGGGCGGCCACGGTGGGTATAGGGAAACAGAGGAGCTGGGCCAGGAGGGGCTTGAAAATCTGGATCATGTGGTTGAGGCGG
TTTCGGGCGGCGGATAGGGAGGAAGCGGAGAGGATCCAGGGGAGATCGAGGCCGTTGGAGAAGAATTTGCCTTGGGAAGTTGTGATGAGAACCGAGCCAGGGGAG
GCTCCGGCTTCGGCCTTCACTAGGGACAGAGCTTTGAGGATGGAATTTATTAAGGATGGGTTGAGCCAGTGCTGGTGGTTGCCGGTTAGAGTTAGTATGAACAGC
TTCCCGCGCTTCTCAACGCTGCACATTTTCGAAACGAAGGTTTCAACAATTGTCACTTGA
Protein sequenceShow/hide protein sequence
MRFEEMLRSKLRNCYDLGGISIPIPPRQLLPKPHCRLHDAVLPVVCRVCYPHPHRRLTSHFHPPQEHIPPHRTRPDLGLGQRHEVVRESGTQVQLAHSWESAKSR
PAAAAWPGRAATVGIGKQRSWARRGLKIWIMWLRRFRAADREEAERIQGRSRPLEKNLPWEVVMRTEPGEAPASAFTRDRALRMEFIKDGLSQCWWLPVRVSMNS
FPRFSTLHIFETKVSTIVT