; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G004490 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G004490
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMitochondrial group I intron splicing factor like
Genome locationCG_Chr05:4205509..4206060
RNA-Seq ExpressionClCG05G004490
SyntenyClCG05G004490
Gene Ontology termsGO:0045927 - positive regulation of growth (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER54806.1 hypothetical protein STAS_32418 [Striga asiatica]6.0e-1154.39Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN++A    R GK+CS+ ALQGF H++ DI+SGN++ K+LGIL +DM+G+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
GFZ14247.1 hypothetical protein Acr_24g0004370 [Actinidia rufa]7.0e-1261.4Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
KAA8527742.1 hypothetical protein F0562_035389 [Nyssa sinensis]1.3e-1057.89Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+C+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
PSR92891.1 Protein of unknown function DUF668 protein [Actinidia chinensis var. chinensis]7.0e-1261.4Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
XP_028113292.1 uncharacterized protein LOC114311349 [Camellia sinensis]1.3e-1057.89Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN+VAG   R GK+CSV ALQGF H++ DIV G ++ K+LG L +DMDG+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
TrEMBL top hitse value%identityAlignment
A0A2R6PKM2 Uncharacterized protein3.4e-1261.4Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5A7RC05 Uncharacterized protein2.9e-1154.39Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        L+DLN++A    R GK+CS+ ALQGF H++ DI+SGN++ K+LGIL +DM+G+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5B7AKR0 Uncharacterized protein (Fragment)2.9e-1159.65Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GKRC+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A5J5AD06 Uncharacterized protein6.4e-1157.89Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+C+V ALQGF H++ DIVSG ++ K LG L +DM+G+ +KM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
A0A7J0GTS7 Uncharacterized protein3.4e-1261.4Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDLN+VAG   R GK+CSV+ALQGF H++ DIV GN++ K LG L +DM+G+ KKM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23160.1 Protein of unknown function (DUF668)3.4e-1250.88Show/hide
Query:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM
        LDDL++VA    R GK+C+  ALQGF H++ DIV+G ++ +KLG L +DM+ + KKM
Subjt:  LDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGATGATTTGAACCAGGTGGCTGGCACTGAGCCCAGACGTGGGAAGAGATGCTCTGTTTCGGCCCTGCAGGGGTTCCACCATATACACACCGACATTGTTAGTGG
GAATCTTGAGGCGAAGAAGCTTGGGATTTTGACCCAAGACATGGACGGAATTCCGAAGAAAATGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGATGATTTGAACCAGGTGGCTGGCACTGAGCCCAGACGTGGGAAGAGATGCTCTGTTTCGGCCCTGCAGGGGTTCCACCATATACACACCGACATTGTTAGTGG
GAATCTTGAGGCGAAGAAGCTTGGGATTTTGACCCAAGACATGGACGGAATTCCGAAGAAAATGGGTTAA
Protein sequenceShow/hide protein sequence
MLDDLNQVAGTEPRRGKRCSVSALQGFHHIHTDIVSGNLEAKKLGILTQDMDGIPKKMG