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ClCG05G004533 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G004533
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:4315244..4315549
RNA-Seq ExpressionClCG05G004533
SyntenyClCG05G004533
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]7.8e-3587.23Show/hide
Query:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV
        MAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A RST+  STHRRHAAP RVV+ALV
Subjt:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2672.92Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV
        IL+LLQL PN AGRTL EKP MVR  E      LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHYA + S Q  ST RR+A PVRVVEAL+
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-2174.32Show/hide
Query:  LQPNLAGRTLHEKPLMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTH
        L PN+AGRTLHE P MVR TE    LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  + ST+  S H
Subjt:  LQPNLAGRTLHEKPLMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]2.1e-3283.7Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV
        +LLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A+ STQ  STHRR+AAP RVV+ LV
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]1.3e-3785.44Show/hide
Query:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVE
        MKFL+  LAMAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A RST+  STHRRHAAP RVV+
Subjt:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVE

Query:  ALV
        ALV
Subjt:  ALV

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein1.0e-3283.7Show/hide
Query:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV
        +LLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A+ STQ  STHRR+AAP RVV+ LV
Subjt:  ILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV

A0A5A7U6N3 Putative transmembrane protein3.8e-3587.23Show/hide
Query:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV
        MAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A RST+  STHRRHAAP RVV+ALV
Subjt:  MAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV

A0A5D3CZY7 Putative transmembrane protein6.2e-3885.44Show/hide
Query:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVE
        MKFL+  LAMAILLLLQLQPNLAGRTLHEKP MVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A RST+  STHRRHAAP RVV+
Subjt:  MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVE

Query:  ALV
        ALV
Subjt:  ALV

A0A5N6QYI5 Uncharacterized protein1.4e-1055.7Show/hide
Query:  MKFLYITLAMAILL-LLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAD
        M+ L I LAM +LL LL +Q   A R LH +       +++LQSLQR  VPPSG SGCT+IPGT GPGCP+KE +YA D
Subjt:  MKFLYITLAMAILL-LLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAD

A0A5N6R1J5 Uncharacterized protein1.1e-1055.07Show/hide
Query:  MAILLLLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAD
        + +L LL +Q   A R LH +       +++LQSLQR +VPPSG SGCT+IPGT GPGCP+KE HYA D
Subjt:  MAILLLLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTCTCTATATAACTCTAGCAATGGCAATCCTTCTCCTGTTGCAGCTTCAGCCAAACTTGGCTGGTAGGACTTTGCATGAGAAACCACTTATGGTGAGAGGAAC
CGAGCTGAAGCTGCAATCTCTTCAGAGAGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCTGGCACCAACGGCCCCGGCTGTCCCCTAAAAGAGAGAC
ACTATGCTGCCGACCGTTCCACGCAACATCTGAGCACTCACCGACGCCATGCTGCCCCTGTTCGTGTCGTCGAGGCTCTCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTCTCTATATAACTCTAGCAATGGCAATCCTTCTCCTGTTGCAGCTTCAGCCAAACTTGGCTGGTAGGACTTTGCATGAGAAACCACTTATGGTGAGAGGAAC
CGAGCTGAAGCTGCAATCTCTTCAGAGAGTCAGTGTACCGCCCTCCGGCCCCTCCGGTTGCACCTTCATTCCTGGCACCAACGGCCCCGGCTGTCCCCTAAAAGAGAGAC
ACTATGCTGCCGACCGTTCCACGCAACATCTGAGCACTCACCGACGCCATGCTGCCCCTGTTCGTGTCGTCGAGGCTCTCGTCTGA
Protein sequenceShow/hide protein sequence
MKFLYITLAMAILLLLQLQPNLAGRTLHEKPLMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRSTQHLSTHRRHAAPVRVVEALV