CuGenDBv2

Gene ID	ClCG05G005163
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	preprotein translocase subunit SECE1
Genome location	CG_Chr05:4977911..4978450
RNA-Seq Expression	ClCG05G005163
Synteny	ClCG05G005163
Gene Ontology terms	GO:0009306 - protein secretion (biological process) GO:0071806 - protein transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domains	IPR038379 - SecE superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049363.1 preprotein translocase subunit SECE1 [Cucumis melo var. makuwa]

4.4e-81

93.89

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Query:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG
        MAVPI LKFPTVPS LTNR AS FVP LRRSS HHSHPHSQHTIRLPTIRS RNIKFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLG
Subjt:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG

Query:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQEALKQRKVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_004134136.1 preprotein translocase subunit SECE1 [Cucumis sativus]

5.2e-82

93.3

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISLKFPTVPS LTNR AS FVPLRRSS HHSHPHSQHTIR PTIRS RN+KFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQ+KVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_008438678.1 PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]

2.6e-81

93.89

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Query:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG
        MAVPISLKFPTVPS LTNR AS FVP LR+SS HHSHPHSQHTIRLPTIRS RNIKFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLG
Subjt:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG

Query:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQEALKQRKVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_022979428.1 preprotein translocase subunit SECE1 [Cucurbita maxima]

3.6e-75

88.27

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISL+FP VPS LT+RAAS FV LRRSS+H SHPHS  TIRLP +RSRRN KFSAVNAVQESQENTESDGV VQAGPPTEE KT DQ AESG NLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQRKVEKEG LIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

XP_038896581.1 preprotein translocase subunit SECE1 [Benincasa hispida]

4.1e-79

91.62

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISLKFPTVPS LTNR+AS F+ LRRSSAHHSHPHSQHTIRLPTIR  R I FSAVNAVQESQENTES+GV VQAGPPTEEPKT DQSAESGANLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQRKVEKEG LIGGVAEEI+EIEWPAF+KVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5J0 Uncharacterized protein

2.5e-82

93.3

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISLKFPTVPS LTNR AS FVPLRRSS HHSHPHSQHTIR PTIRS RN+KFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQ+KVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A1S3AWM4 preprotein translocase subunit SECE1

1.2e-81

93.89

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Query:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG
        MAVPISLKFPTVPS LTNR AS FVP LR+SS HHSHPHSQHTIRLPTIRS RNIKFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLG
Subjt:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG

Query:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQEALKQRKVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A5D3D089 Preprotein translocase subunit SECE1

2.1e-81

93.89

Show/hide

Query:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG
        MAVPI LKFPTVPS LTNR AS FVP LRRSS HHSHPHSQHTIRLPTIRS RNIKFSAVNAVQESQENTESDGV VQAGPPTEEPKT DQSAESGANLG
Subjt:  MAVPISLKFPTVPSALTNRAASWFVP-LRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLG

Query:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        AEIQEALKQRKVEKEG LIGGVAEEI+EIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  AEIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A6J1GWU8 preprotein translocase subunit SECE1

8.6e-75

88.27

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISL+FPTVPS  TNRAAS FV LRRSSA+HSHPH   TIRLP IRSRRN  FSAVNAVQESQENTESDGV VQAGPP EE KT DQ AESG NLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQRKVEKEG LIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

A0A6J1IW64 preprotein translocase subunit SECE1

1.7e-75

88.27

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Query:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA
        MAVPISL+FP VPS LT+RAAS FV LRRSS+H SHPHS  TIRLP +RSRRN KFSAVNAVQESQENTESDGV VQAGPPTEE KT DQ AESG NLGA
Subjt:  MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGA

Query:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        EIQEALKQRKVEKEG LIGGVAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Subjt:  EIQEALKQRKVEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

SwissProt top hits

e value

%identity

Alignment

O23342 Preprotein translocase subunit SECE1

1.9e-26

51.77

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Query:  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLG
        IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI+ A++QRK  E+E G    + GVAEE++EIEWPAF+KVLG
Subjt:  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLG

Query:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        TTGVV+GVIAGSSVVLLTVN LLAELSDRVF G+GVQDFFS
Subjt:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Arabidopsis top hits

e value

%identity

Alignment

AT4G14870.1 secE/sec61-gamma protein transport protein

1.3e-27

51.77

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Query:  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLG
        IR  T  + R        A+++ ++   S+        P EE  + +      + +GAEI+ A++QRK  E+E G    + GVAEE++EIEWPAF+KVLG
Subjt:  IRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRK-VEKEGG---LIGGVAEEIREIEWPAFRKVLG

Query:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
        TTGVV+GVIAGSSVVLLTVN LLAELSDRVF G+GVQDFFS
Subjt:  TTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Sequences

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CDS sequence

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ATGGCCGTTCCGATCTCCCTGAAATTTCCGACGGTACCATCCGCTTTAACCAACAGAGCCGCCTCCTGGTTCGTACCACTACGGCGGAGCTCCGCTCATCATTCTCATCC
TCATTCACAACACACGATCAGACTCCCGACGATTAGGTCCAGAAGGAACATTAAGTTCTCCGCCGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGGG
TGGGAGTTCAAGCAGGGCCACCGACGGAGGAGCCGAAAACGACCGACCAATCGGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAG
GTGGAGAAAGAAGGGGGCCTGATCGGCGGAGTGGCGGAGGAGATTAGGGAGATTGAGTGGCCGGCGTTCCGTAAGGTTTTGGGCACGACGGGGGTAGTGATCGGAGTTAT
TGCTGGCTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTATTGGCAGAGTTGTCCGACCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA

mRNA sequence

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Protein sequence

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MAVPISLKFPTVPSALTNRAASWFVPLRRSSAHHSHPHSQHTIRLPTIRSRRNIKFSAVNAVQESQENTESDGVGVQAGPPTEEPKTTDQSAESGANLGAEIQEALKQRK
VEKEGGLIGGVAEEIREIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

ClCG05G005163 (gene) of Watermelon (Charleston Gray) v2.5 genome