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ClCG05G005167 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G005167
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionFerredoxin
Genome locationCG_Chr05:4984693..4985136
RNA-Seq ExpressionClCG05G005167
SyntenyClCG05G005167
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582296.1 Ferredoxin C 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7092.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQIGCS+R LVVRSYKVVIEHEG++TELEVDADESIL SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_004134137.1 ferredoxin C 1, chloroplastic [Cucumis sativus]9.2e-6993.2Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQP KLSSV   RPTTQI CSRR LVVRSYKVVIEHEG++TELEVD DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVV QGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_022956084.1 uncharacterized protein LOC111457884 [Cucurbita moschata]4.4e-7192.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQ+GCS+R LVVRSYKVVIEHEG++TELEVDADESIL SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_022979429.1 uncharacterized protein LOC111479154 [Cucurbita maxima]1.7e-7092.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQIGCS+R LVVRSYKVVIEHEG++TELEVDADESIL+SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_023526556.1 uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]2.6e-7193.2Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCS+R LVVRSYKVVIEHEG++TELEVDADESIL SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

TrEMBL top hitse value%identityAlignment
A0A0A0L4U6 Ferredoxin4.4e-6993.2Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQP KLSSV   RPTTQI CSRR LVVRSYKVVIEHEG++TELEVD DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVV QGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A1S3AX36 Ferredoxin7.6e-6992.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQP KLSSV   +PTT I CSRR LVVRSYKVVIEHEG++TELEVD DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A5D3D1U0 Ferredoxin7.6e-6992.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQP KLSSV   +PTT I CSRR LVVRSYKVVIEHEG++TELEVD DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A6J1GY17 Ferredoxin2.1e-7192.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQ+GCS+R LVVRSYKVVIEHEG++TELEVDADESIL SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A6J1IWL8 Ferredoxin8.1e-7192.52Show/hide
Query:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD
        MATLHFVPSAFSLPKQKQPTKLSSVFKLR TTQIGCS+R LVVRSYKVVIEHEG++TELEVDADESIL+SALD GL+IPHDCKLGVCMTCPARLVSG VD
Subjt:  MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVD

Query:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        QSEGMLSDDVVE+GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  QSEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

SwissProt top hitse value%identityAlignment
O23344 Ferredoxin C 1, chloroplastic4.3e-4563.01Show/hide
Query:  SAFSLPKQKQPTKLSSVFKLRPTTQIGCSRR-------CLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ
        S  SLPK       S  F LR  T    + R        ++ R+YKVV+EH+GK+TELEV+ DE+ILS ALD+GL++P+DC LGVCMTCPA+LV+GTVDQ
Subjt:  SAFSLPKQKQPTKLSSVFKLRPTTQIGCSRR-------CLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ

Query:  SEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        S GMLSDDVVE+GY+LLC +YP SDCHIK IPEEELL+LQLATAND
Subjt:  SEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

P00247 Ferredoxin1.8e-1950Show/hide
Query:  SYKVVI--EHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL
        +YKV +  + EG +  +EVD D  IL +A + GL++P+ C+ G C TC  ++ SGTVDQS +  L DD +E GY L CVAYP SDC I+T  EEEL
Subjt:  SYKVVI--EHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL

P00248 Ferredoxin8.2e-2050Show/hide
Query:  SYKVVI--EHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL
        +YKV +  E EG +  +EV  D+ IL +A + G+++P+ C+ G C TC  +L+SGTVDQS +  L DD +E GY L CVAYP SDC I+T  EEEL
Subjt:  SYKVVI--EHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL

P00252 Ferredoxin-14.8e-2051.06Show/hide
Query:  YKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL
        YKV +++ EG  T ++V  DE IL  A D GL++P+ C+ G C TC  ++VSGTVDQS +  L DD +E+GY L CVAYP SD  I+T  EE+L
Subjt:  YKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL

P08451 Ferredoxin-24.8e-2047.96Show/hide
Query:  SYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGM-LSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQ
        +Y+V + ++G+S     D+D+S+L SA   G+++P  C  GVC TC AR++SG VDQ + M +  +  +QGY+LLCVAYPRSD  I+T  E+EL ALQ
Subjt:  SYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGM-LSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQ

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 13.3e-1635.92Show/hide
Query:  VPSAFSLPKQKQPTKL--------SSVFKLRPTTQIGCSRRCLVVRSYKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSG
        + S   L +Q+ P  L         S+F L+ +T  G   R   + +YKV  I  EG+  E+E + D  +L +A + GL++P+ C+ G C +C  ++VSG
Subjt:  VPSAFSLPKQKQPTKL--------SSVFKLRPTTQIGCSRRCLVVRSYKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSG

Query:  TVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELL
        ++DQS +  L D+ + +GY L CVAYP SD  I+T  EE ++
Subjt:  TVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELL

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein1.6e-1536.21Show/hide
Query:  SVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAY
        S+F L+  T  G   R   + +YKV         E+E D D  +L +A + G+++P+ C+ G C +C  ++VSG+VDQS +  L D+ + +G+ L C AY
Subjt:  SVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLLCVAY

Query:  PRSDCHIKTIPEEELL
        P SD  I+T  EE+++
Subjt:  PRSDCHIKTIPEEELL

AT2G27510.1 ferredoxin 35.4e-1947.87Show/hide
Query:  YKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL
        YKV ++  +G+  E EV  D+ IL +A + G+++P+ C+ G C TC  ++VSG VDQS+G  L D  +E+GY L CVAYP+SDC I T  E EL
Subjt:  YKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEEL

AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein3.1e-4663.01Show/hide
Query:  SAFSLPKQKQPTKLSSVFKLRPTTQIGCSRR-------CLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ
        S  SLPK       S  F LR  T    + R        ++ R+YKVV+EH+GK+TELEV+ DE+ILS ALD+GL++P+DC LGVCMTCPA+LV+GTVDQ
Subjt:  SAFSLPKQKQPTKLSSVFKLRPTTQIGCSRR-------CLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQ

Query:  SEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        S GMLSDDVVE+GY+LLC +YP SDCHIK IPEEELL+LQLATAND
Subjt:  SEGMLSDDVVEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

AT5G10000.1 ferredoxin 43.3e-1637.5Show/hide
Query:  PTKLSSVFKLRPTTQIGCSR------RCLVVRSYKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLSDDV
        P++     +L  TT  G S       +     S KV +I  EG+  E+E + D  IL SA + GLE+P+ C+ G C TC  +LVSG VDQS G  L ++ 
Subjt:  PTKLSSVFKLRPTTQIGCSR------RCLVVRSYKV-VIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLSDDV

Query:  VEQGYSLLCVAYPRSDCHIKTIPEEELL
        +++GY L C+A P  DC + T  + +L+
Subjt:  VEQGYSLLCVAYPRSDCHIKTIPEEELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCTACCCAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAAATAGGCTGCTC
AAGGCGGTGCTTGGTGGTCCGGTCATACAAAGTAGTAATCGAGCACGAGGGGAAGTCCACCGAGCTGGAGGTCGATGCCGACGAGAGCATATTAAGCAGTGCATTGGACA
ATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTT
GTGGAGCAAGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCACATAAAAACCATCCCTGAGGAAGAATTGTTGGCACTTCAATTAGCCACGGCTAATGA
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCTTCATTTTGTTCCATCCGCTTTCTCTCTACCCAAACAAAAGCAACCCACCAAGCTTTCCTCAGTCTTCAAGCTCAGACCCACAACCCAAATAGGCTGCTC
AAGGCGGTGCTTGGTGGTCCGGTCATACAAAGTAGTAATCGAGCACGAGGGGAAGTCCACCGAGCTGGAGGTCGATGCCGACGAGAGCATATTAAGCAGTGCATTGGACA
ATGGCTTAGAAATTCCTCACGATTGCAAGCTTGGAGTGTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTT
GTGGAGCAAGGCTATTCGCTTCTGTGTGTGGCTTATCCCCGCTCAGACTGCCACATAAAAACCATCCCTGAGGAAGAATTGTTGGCACTTCAATTAGCCACGGCTAATGA
CTAA
Protein sequenceShow/hide protein sequence
MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSRRCLVVRSYKVVIEHEGKSTELEVDADESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDV
VEQGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND