; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G005170 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G005170
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionRibosomal protein
Genome locationCG_Chr05:4985493..4987314
RNA-Seq ExpressionClCG05G005170
SyntenyClCG05G005170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138029.1 uncharacterized protein LOC111009286 [Momordica charantia]2.0e-0829.32Show/hide
Query:  KNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN----------------------------------------------------EKEKH
        + DH   D+ D D  DI NM       +I G LF KLDRGS+                                                     E++  
Subjt:  KNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN----------------------------------------------------EKEKH

Query:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR
        DV+KKL TP FNQL  P HEP C                            D+ I +   RA + H                                  
Subjt:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR

Query:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
           +T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

XP_022934433.1 uncharacterized protein LOC111441610 isoform X1 [Cucurbita moschata]1.1e-0629.96Show/hide
Query:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK
        DH   D+ D +F DI NM       +I G LF KLDRGS+                             N+K                          E 
Subjt:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK

Query:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM
        +D +KKL TP FNQL +P HEP C                            D+ I +   RA + H   +G                            
Subjt:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM

Query:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
             T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

XP_022973751.1 uncharacterized protein LOC111472322 [Cucurbita maxima]9.7e-0829.32Show/hide
Query:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKH
        DH   D+ D +F DI NM       +I G LF KLDRGS+                                                       E+E +
Subjt:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKH

Query:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR
        D +KKL TP FNQL +P HEP C                            D+ I +   RA + H                                  
Subjt:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR

Query:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
           +T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

XP_023540951.1 uncharacterized protein LOC111801183 [Cucurbita pepo subsp. pepo]1.1e-0629.96Show/hide
Query:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK
        DH   D+ D +F DI NM       +I G LF KLDRGS+                             N+K                          E 
Subjt:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK

Query:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM
        +D +KKL TP FNQL +P HEP C                            D+ I +   RA + H   +G                            
Subjt:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM

Query:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
             T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

XP_038896573.1 uncharacterized protein LOC120084825 [Benincasa hispida]1.3e-0729.81Show/hide
Query:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD
        H   D+ DLDF +I NM       +I G LF KLDRGS+                                                       E+E  D
Subjt:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD

Query:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD
        V+KKL TP FNQL  P HEP C                            D+ I +   RA + H                                   
Subjt:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD

Query:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
          +T K+VAV HSIS  MK D+TSRK SS  T   AVLAQ ALADDIHN V    K +   GKL+
Subjt:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

TrEMBL top hitse value%identityAlignment
A0A0A0KSG6 Uncharacterized protein6.8e-0728.68Show/hide
Query:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD
        H   D+ D DF DI NM       +I G LF KLD+ S+                                                       E+E  D
Subjt:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD

Query:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD
        V+KKL TP FNQL SP HEP C                            D+ I +   RA + H                                   
Subjt:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD

Query:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
          +T K+VAV HSISK MK D+TSRK SS      AVLAQ AL DDIHN +    K +   GKL+
Subjt:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

A0A1S3CAH6 uncharacterized protein LOC1034985146.8e-0729.06Show/hide
Query:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD
        H   D+ D DF DI NM       +I G LF KLDRGS+                                                       E+E  D
Subjt:  HHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKHD

Query:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD
        V+KKL TP FNQL    HEP C                            D+ I +   RA + H                                   
Subjt:  VKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRD

Query:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
          +T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN +    K +   GKL+
Subjt:  LTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

A0A6J1C8X9 uncharacterized protein LOC1110092869.5e-0929.32Show/hide
Query:  KNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN----------------------------------------------------EKEKH
        + DH   D+ D D  DI NM       +I G LF KLDRGS+                                                     E++  
Subjt:  KNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN----------------------------------------------------EKEKH

Query:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR
        DV+KKL TP FNQL  P HEP C                            D+ I +   RA + H                                  
Subjt:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR

Query:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
           +T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

A0A6J1F7N1 uncharacterized protein LOC111441610 isoform X15.2e-0729.96Show/hide
Query:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK
        DH   D+ D +F DI NM       +I G LF KLDRGS+                             N+K                          E 
Subjt:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQ-----------------------------NEK--------------------------EK

Query:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM
        +D +KKL TP FNQL +P HEP C                            D+ I +   RA + H   +G                            
Subjt:  HDVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRM

Query:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
             T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  RDLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

A0A6J1I8E0 uncharacterized protein LOC1114723224.7e-0829.32Show/hide
Query:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKH
        DH   D+ D +F DI NM       +I G LF KLDRGS+                                                       E+E +
Subjt:  DHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQN------------------------------------------------------EKEKH

Query:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR
        D +KKL TP FNQL +P HEP C                            D+ I +   RA + H                                  
Subjt:  DVKKKLGTPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMR

Query:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE
           +T K+VAV HSISK MK D+TSRK SS      AVLAQ ALADDIHN V    K +   GKL+
Subjt:  DLTLTIKIVAVVHSISKHMKSDMTSRKISSIYT---AVLAQGALADDIHNSVKPSSKID--PGKLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22450.1 Ribosomal L18p/L5e family protein4.1e-0446.03Show/hide
Query:  LTIKIVAVVHSISKHMKSDMTSRK---ISSIYTAVLAQGALADDIHNSVKPSSKID--PGKLE
        +T K+V V HSISK MK D+ SR+     +   AVLAQ +L DDIH+ +    K D   GKL+
Subjt:  LTIKIVAVVHSISKHMKSDMTSRK---ISSIYTAVLAQGALADDIHNSVKPSSKID--PGKLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATA
TCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACA
ACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGG
ACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGT
CGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTG
AACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAG
CATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAA
GATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAAAAGGAAAGTTGAAGACGAACTTGGATCAAACAAATCAACCCAGGTCACAAGTTCAGATCATTCAATAAAATTACAAATGGTTCATCCAGGCCTTAGATA
TCTCCATTATTCATTACTGGTGAACCCCATTCAGTTGCTTATAATGTTGAATTTGAAGAATGATCATCACTCAGCTGATCATTATGATTTAGATTTTCATGATATTCACA
ACATGATAGTATATTCAATAAGCTCACAAATACATGGATATCTTTTCGATAAGCTCGATCGAGGTTCCCAGAATGAAAAAGAGAAACATGATGTTAAGAAGAAGCTCGGG
ACACCCATGTTTAATCAGCTTATTAGTCCTTGCCATGAGCCATTATGTTATGGGTATAGTCATGGTGTTATAGGACTCCATCAACCATGCCAATGCTCAAGAACTAAGGT
CGTGACACGTGGCTTGCCACGTGACCTAACCATCAAAAGGCGTATGTCTCGAGCCCCATTGGAGCACACTGAGATTAAGGGGAAGCAACACCAAGGTCGTTCTCGACTTG
AACCAAATCTCCAAATAGCCGACCCATCCAAGCATAGGAGACAATTGAACAGAATGAGGGATCTAACACTAACGATTAAGATTGTCGCTGTGGTACATTCAATTTCTAAG
CATATGAAATCTGACATGACATCAAGAAAGATATCCTCTATCTATACGGCTGTTTTGGCTCAGGGAGCATTGGCTGATGATATCCACAATTCAGTAAAACCAAGCAGCAA
GATAGACCCAGGAAAGCTGGAAGATCATAAAGTTGCCATTTGA
Protein sequenceShow/hide protein sequence
MGGKRKVEDELGSNKSTQVTSSDHSIKLQMVHPGLRYLHYSLLVNPIQLLIMLNLKNDHHSADHYDLDFHDIHNMIVYSISSQIHGYLFDKLDRGSQNEKEKHDVKKKLG
TPMFNQLISPCHEPLCYGYSHGVIGLHQPCQCSRTKVVTRGLPRDLTIKRRMSRAPLEHTEIKGKQHQGRSRLEPNLQIADPSKHRRQLNRMRDLTLTIKIVAVVHSISK
HMKSDMTSRKISSIYTAVLAQGALADDIHNSVKPSSKIDPGKLEDHKVAI