CuGenDBv2

Gene ID	ClCG05G005980
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nucleolar protein 58
Genome location	CG_Chr05:5926361..5927701
RNA-Seq Expression	ClCG05G005980
Synteny	ClCG05G005980
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]

5.4e-58

73.4

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   +NKKNKRQK                               IV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]

4.5e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNKK NKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]

3.5e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNKK NKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]

4.5e-57

74.05

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSL-SVASIFPRNKSVVTVLQIVDDSECGVGKKPKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   +NKKNKRQKV IP      LY+L SVASIFP  +  +   +++      +G+ PK+
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSL-SVASIFPRNKSVVTVLQIVDDSECGVGKKPKK

XP_038890855.1 uncharacterized protein LOC120080295 [Benincasa hispida]

6.1e-62

75.81

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Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFL+RKLHQDPNALSSI+PQILDLAVRNAKASVLS G+SGSGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE S D+GEAMNSEPR+Q KKK KK+NKKNKRQK                               IV+DS CGVGKKPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAK0 Uncharacterized protein

2.6e-58

73.4

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   +NKKNKRQK                               IV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A1S3AY37 uncharacterized protein LOC103483832

5.4e-56

71.89

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKLHQDPNA SSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   +NKKNKRQK                               IV+DSECGVGK P  K
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---RNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKK

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X1

2.2e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNKK NKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X2

1.7e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNKK NKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A6J1IUT6 uncharacterized protein LOC111479494

2.9e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KNKK NKKNK+ K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18540.1 unknown protein

2.1e-36

63.97

Show/hide

Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSE-PRKQKKKNKKRNKKNKRQK
        +D EVS D+ +  N++  +K+KKKN K+ K+ K++K
Subjt:  DDPEVSFDEGEAMNSE-PRKQKKKNKKRNKKNKRQK

AT5G18540.2 unknown protein

2.1e-36

63.97

Show/hide

Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSE-PRKQKKKNKKRNKKNKRQK
        +D EVS D+ +  N++  +K+KKKN K+ K+ K++K
Subjt:  DDPEVSFDEGEAMNSE-PRKQKKKNKKRNKKNKRQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGAAGCAAATTTGCGCCTCTCCCATCCCAATCCACTTCCTCTCGATCTCAACCAAGGTTGGCTCATCCAGG
TGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCGAAAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCG
CTGTTCGGAATGCCAAAGCCTCTGTTCTATCCAGTGGCACGTCAGGTTCTGGCACGACTATTCGCCACGTGGATACATTCGATGATCCTGAGGTCTCTTTTGACGAAGGG
GAAGCCATGAATTCTGAGCCTAGAAAGCAAAAGAAGAAGAACAAGAAGAGAAATAAGAAGAATAAAAGGCAAAAGGTCGGAATCCCTTCATGGTTTTGTTTCAAGCTCTA
TAGTCTTAGTGTTGCCTCTATATTTCCTCGTAATAAATCTGTTGTGACTGTACTGCAGATTGTTGATGACTCGGAGTGTGGCGTTGGGAAAAAACCTAAAAAGAAGTTGA
GATTGTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAAATAGAGAAAATCCATAGCCATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGAAGCAAATTTGCGCCTCTCCCATCCCAATCCACTTCCTCTCGAT
CTCAACCAAGGTTGGCTCATCCAGGTGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCGAAAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCT
ATCAATCCCCAGATTTTGGACCTCGCTGTTCGGAATGCCAAAGCCTCTGTTCTATCCAGTGGCACGTCAGGTTCTGGCACGACTATTCGCCACGTGGATACATTCGATGA
TCCTGAGGTCTCTTTTGACGAAGGGGAAGCCATGAATTCTGAGCCTAGAAAGCAAAAGAAGAAGAACAAGAAGAGAAATAAGAAGAATAAAAGGCAAAAGGTCGGAATCC
CTTCATGGTTTTGTTTCAAGCTCTATAGTCTTAGTGTTGCCTCTATATTTCCTCGTAATAAATCTGTTGTGACTGTACTGCAGATTGTTGATGACTCGGAGTGTGGCGTT
GGGAAAAAACCTAAAAAGAAGTTGAGATTGTGAGCTGAAAGGAAACACAACTGGAGATATGATATTCAGTCTTCAGAAGATTGGGGAATTAACTTGAAAGGAGTTGGATG
AAACCATTTTGGAAGCAAGGCAGTTATTAAGCCCTACAGGGTTGTTGCTGTTCCTGATATTTTTTGAACAAGGAGAACTATTTAATCTCATATTCACGAGTCTAAAACAC
TTGATTGACTTGATTTCTCTAGTAAAAGAATGCTGTTTAGCTTCTCTTACTCATGTTGCAACATTTTATTTTTTGTTGGCAAATTGCAACTTTCTTTAAATCCAATGGTT
TAAATTCGATTGTTCATT

Protein sequence

Show/hide protein sequence

MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTFDDPEVSFDEG
EAMNSEPRKQKKKNKKRNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

ClCG05G005980 (gene) of Watermelon (Charleston Gray) v2.5 genome