; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G006103 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G006103
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Descriptiontranslocator protein homolog
Genome locationCG_Chr05:6060894..6061412
RNA-Seq ExpressionClCG05G006103
SyntenyClCG05G006103
Gene Ontology termsGO:0018216 - peptidyl-arginine methylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134488.1 translocator protein homolog [Cucumis sativus]4.2e-8189.53Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI PLW + LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVWNPLVLVIRSV++AFLFCVLD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSA+TYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

XP_016898980.1 PREDICTED: translocator protein homolog [Cucumis melo]5.0e-8290.7Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVW+PLVLVIRSV++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

XP_022973726.1 translocator protein homolog [Cucurbita maxima]3.8e-8291.76Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ PLW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        HLSLSVVWNPLVLVIR+++LAFLFCVLDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]1.9e-8191.18Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ PLW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        HLSLSVVWNPLVLVIR+++LAFLFCVLD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

XP_038878873.1 translocator protein homolog [Benincasa hispida]2.3e-8797.09Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRSARHFPNRNRPIWI PLW LHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVWNPLVLVIRSV+LAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSA+TYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

TrEMBL top hitse value%identityAlignment
A0A0A0L583 Uncharacterized protein2.0e-8189.53Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI PLW + LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVWNPLVLVIRSV++AFLFCVLD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSA+TYVFIDL
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

A0A1S4DTF2 translocator protein homolog2.4e-8290.7Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVW+PLVLVIRSV++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

A0A5D3CWC4 Translocator protein-like protein2.4e-8290.7Show/hide
Query:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY
        M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLY
Subjt:  MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLY

Query:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        IAHLSLSVVW+PLVLVIRSV++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Subjt:  IAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

A0A6J1FZS9 translocator protein homolog2.7e-8191.18Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ PLW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        HLSLSVVWNPLVLVIR+ +LAFLFCVLD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

A0A6J1ICB9 translocator protein homolog1.8e-8291.76Show/hide
Query:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA
        SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ PLW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIA
Subjt:  SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIA

Query:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL
        HLSLSVVWNPLVLVIR+++LAFLFCVLDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Subjt:  HLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

SwissProt top hitse value%identityAlignment
E2RDM9 Translocator protein 21.7e-0531.72Show/hide
Query:  AVSVAIPLFLTIAVIFLF-GRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVM--L
        A+ VA+P    I V  L   R  R +    +P W PP   L    I   F++G A++LVW D GG  G   ALPL +  + L+V W  L+    +    L
Subjt:  AVSVAIPLFLTIAVIFLF-GRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVM--L

Query:  AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITY
        A L  +L +  + +    +  +N  A  L+ P LAW    ++I Y
Subjt:  AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITY

O82245 Translocator protein homolog7.1e-3142.04Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WIPPLW LH + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI
        VW+P+   + S +      +     LF CY+ F  ++P A +L+KPCLAW A+++A+
Subjt:  VWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI

Q5TGU0 Translocator protein 24.3e-0433.04Show/hide
Query:  WIPPLWFLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVL--VIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPC
        W P    L L       ++G A++LVW D GG  G   ALPL +  + L++ W  LVL   + +  LA L  +L +  + +    +  +N  A  L+ P 
Subjt:  WIPPLWFLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVL--VIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPC

Query:  LAWTAYLSAITY
        LAW    SA+TY
Subjt:  LAWTAYLSAITY

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related5.0e-3242.04Show/hide
Query:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV
        K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WIPPLW LH + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +
Subjt:  KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSV

Query:  VWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI
        VW+P+   + S +      +     LF CY+ F  ++P A +L+KPCLAW A+++A+
Subjt:  VWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAAC
AATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCT
CCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGTTCCAACGCTCTTCCGCTCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGG
AATCCTCTGGTGCTCGTGATTCGCTCTGTCATGCTTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTCAATCCCTT
CGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTATTACTTATGTGTTCATTGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAAC
AATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCT
CCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGTTCCAACGCTCTTCCGCTCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGG
AATCCTCTGGTGCTCGTGATTCGCTCTGTCATGCTTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTCAATCCCTT
CGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTATTACTTATGTGTTCATTGATCTTTGA
Protein sequenceShow/hide protein sequence
MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW
NPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL