; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G006200 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G006200
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDynein light chain
Genome locationCG_Chr05:6170468..6174752
RNA-Seq ExpressionClCG05G006200
SyntenyClCG05G006200
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597532.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3678.22Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNFDLELNAKCFD
        MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF    ++ C  
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNFDLELNAKCFD

Query:  L
        L
Subjt:  L

KAG7028990.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]3.6e-3585.56Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]3.6e-3585.56Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

XP_022955505.1 dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita moschata]2.3e-3486.81Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MNQES R++P+PLMVKPES+DRK SS AAA +KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAEHIKKEFD+ HGPTWHCIVGRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]3.0e-3791.11Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MNQESHR++P PLMVKPES DRKPSSAAAVSKKIVIKSADMF DMQKEAIDIAIAAFEKHSVEKD+AE IKK+FDKNHGPTWHCIVGRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

TrEMBL top hitse value%identityAlignment
A0A6J1G0U9 Dynein light chain1.8e-3585.56Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MN +S R++PSPLMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

A0A6J1GVA3 Dynein light chain1.1e-3486.81Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MNQES R++P+PLMVKPES+DRK SS AAA +KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAEHIKKEFD+ HGPTWHCIVGRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSS-AAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

A0A6J1I9I2 Dynein light chain2.1e-3384.44Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MN +S R++PS LMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

A0A6J1IC60 Dynein light chain2.1e-3384.44Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MN +S R++PS LMVKPES+DRKPSSAA V KKIVIKSADMFGDMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

A0A6J1IQ69 Dynein light chain7.4e-3484.44Show/hide
Query:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        MNQES R++P+PLMVKPES+DRK SS AA +KKIVIKSADMFG MQKEA+DIAIAAFEKHSVEKDVAE IKKEFD+ HGPTWHCIVGRNF
Subjt:  MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic7.9e-1765.57Show/hide
Query:  VSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        V +K VIK+ADM  DMQ++AID A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Subjt:  VSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

Q39580 Dynein 8 kDa light chain, flagellar outer arm3.0e-1661.9Show/hide
Query:  AAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        A+ S K VIK+ADM  +MQ +A+D A  A EK+++EKD+A +IKKEFD+ H PTWHCIVGRNF
Subjt:  AAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

Q3MHR3 Dynein light chain 2, cytoplasmic3.0e-1664.41Show/hide
Query:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

Q96FJ2 Dynein light chain 2, cytoplasmic3.0e-1664.41Show/hide
Query:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

Q9D0M5 Dynein light chain 2, cytoplasmic3.0e-1664.41Show/hide
Query:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A +IKKEFDK + PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 116.4e-0641.67Show/hide
Query:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSVE--KDVAEHIKKEFDKNHGPTWHCIVGRNF
        K +++ +DM   MQ +A+  A  A +   V   K +A HIKKEFD+ +G  W C+VG NF
Subjt:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSVE--KDVAEHIKKEFDKNHGPTWHCIVGRNF

AT3G16120.1 Dynein light chain type 1 family protein3.2e-0540Show/hide
Query:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSV--EKDVAEHIKKEFDKNHGPTWHCIVGRNF
        K  ++  DM   MQ +A+ IA  + +   V     +A HIKKEFD+ +G  W C+VG NF
Subjt:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSV--EKDVAEHIKKEFDKNHGPTWHCIVGRNF

AT4G15930.1 Dynein light chain type 1 family protein8.3e-2281.36Show/hide
Query:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        K+ VIKSADM  DMQKEAI+IAI+AFEK+SVEKD+AE+IKKEFDK HG TWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF

AT4G27360.1 Dynein light chain type 1 family protein9.3e-0538.33Show/hide
Query:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSVEK--DVAEHIKKEFDKNHGPTWHCIVGRNF
        K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+++G  W CIVG +F
Subjt:  KIVIKSADMFGDMQKEAIDIAIAAFEKHSVEK--DVAEHIKKEFDKNHGPTWHCIVGRNF

AT5G20110.1 Dynein light chain type 1 family protein5.8e-0747.76Show/hide
Query:  AAAVSKKIVIKSADMFGDMQKEAIDIA---IAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF
        AAA    + I +ADM G MQ  A   A   + + EK S  K +A ++KKEFDK +GP WHCIVG +F
Subjt:  AAAVSKKIVIKSADMFGDMQKEAIDIA---IAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGAATCTCATCGCACCAGTCCTTCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCGTCTCCAAGAAAATCGTCATCAA
GAGCGCCGATATGTTCGGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACACATAAAGAAGGAGT
TCGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGATCTAGAGCTGAATGCTAAATGCTTTGACCTAAAGTTGATATGTCACTTGTTCATATGT
GACACACGAGACGAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGTTGATGATCGTTCTCCCCTTGAAAAGGATGCCACCAATTTG
GCGAGCTTGCGTCAATGATGCTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTATGTAAATCACCTGGTGTTGCATTTTCTATATTGTAACTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAGAACGAGCGAGTAGAGAGGAGTGGGCGTCGAGAATCTTAGAGAAGAGACGCAGAGTGATAGTGGATGAGAGCGAGTGCCTTTCTTCTCTCACTCGCTCTT
CTTCATCTCTTACCACCAGAACAATATTCTCTGAAAGCTCCACCAAGTCATGAACCAAGAATCTCATCGCACCAGTCCTTCACCTCTAATGGTGAAGCCTGAATCTCAGG
ATCGCAAACCCTCATCTGCCGCTGCCGTCTCCAAGAAAATCGTCATCAAGAGCGCCGATATGTTCGGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTT
GAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACACATAAAGAAGGAGTTCGATAAGAATCATGGACCCACCTGGCATTGCATCGTCGGTCGTAATTTTGATCTAGAGCT
GAATGCTAAATGCTTTGACCTAAAGTTGATATGTCACTTGTTCATATGTGACACACGAGACGAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTC
AAATCTGGTTGATGATCGTTCTCCCCTTGAAAAGGATGCCACCAATTTGGCGAGCTTGCGTCAATGATGCTACAACTATTTCTTGTATGTATAATCTAGTCTGCCAGTAT
GTAAATCACCTGGTGTTGCATTTTCTATATTGTAACTAATTTATCACTGGGGAGTAGATTAAATGGTGAAACAAGAATTCCATTTACATAATGTATCAAAAGGTCTCTTT
GTCAATATCACTAAAACAGAAGGCTGCAGTACAAGCTTGAAAATGAAAAAGAAAATGCTCTGTCATTGCCAAATGGTCAATGTCTGGTCAATGTCGCTTGAAATTTTGTC
ATTGTGTGTTGATAGATGAGTTTATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGTTGTGGTTCAATTTTCAAATACTGGCTGTGAAATATGCCTTGGA
AGTTGATCAGCTAGCTATATAAGAGTAAAGGCACCATTGTAGTAGTACAAGTACAATACAAGATAGGGTGTAGTAAAAAGGGGTAGTGCAGACTGGAATTTTGAAACAAG
AAGAGTTTTTGTAGTGTTGCTGAATGAAGGAAGGAGTTAAAGCTCTCTTAATTTAGTACTAGAGAAATGAGATTCTGCAGCATATTTGTGTTGATTCGTTACTCTTGATT
CCTTTTATTATTATAATGGCTTTGTCTTTTACACAACTTAGCAGCGCTACCCTCAACTTTCTTTGGCAGGGGAGGAACTTTGGGGCCTGCTTGGCTACTTTGTTCTGGAT
ATGTAAAATAGAAAAAGGATAAAAACTCTAATAAACATATGTTTTCTTATTAATATATTTTAGATTATATAATCTTGTAAAATAATTATTATACAAAACTAATAATATAA
AGTTGATTCATAAATTAATTAATAATAATTTGGCATCAATCTAATATTTAGTTAGATAAGTCAATAATTTCATTGATTTTGTCAAAGATTTAGCCTGTCAAAGGAAATTT
AATCCGTATCTTTAGGCTTGTTGATCTTCTTAGATGATCTATCTTTGAGCTTGAGGATTTTCTTAGATGAACGATTCTTGGACATATTGATTGGCTTGTTGTTCAACAAC
TTGGATTGACCTTTGGTTTGTTGATCGATTAGAACCAACCTCTGGCTTGTTGATTAACTTGTTTAGGTTATTGGCTGGTTGTTCGACTTGGATCAACCTTTGACTTGTTG
ATTGATTTGGATCGGCCTATTAATCGGCTTGTGGAGTTTTTCTTGAATTTGAGGAGAATGAGTCTACAACTTGCAAGTTGTGAAGAGACTATTAATTCGTTGAAATCTTC
ATGTTTTTTAGGAGACTAATCTTCGGTTTATAGATGGCAAAAAGACAATCTCAATTTGTTGAAGTCTTCAAATCTTTGAACAGATCAATCTTCATGTTTTTTAGGAGACT
AATCTTCAGTTTATAGATGGCAAAAAGACAGTCTCAATTTGTTGAAGTCTTCAAGTCTTTGAACAGATCAATCTTCAACTTGTAGATACTTGTAGATGGGCGAAGAGGCG
ATCAATTTGTTGAAGAAGAGACGCTCAATTCATTAAAGAAGAGATGATCAATTCATTGGAGAAGAGACATGCAATTTGTTGAAGAAGAGGCTATTAGTTTGTTGGAGTCT
CTTGGTTTTTGAAATGATGGGGTGGTCTCCTTTATTTATAAAATTTTGGGAGACCCTATTTGAGCTTGAGCTTGATTGACATTGACCAACTTTTAGGCTCGGACTTAATT
TAATTTATTTTTTAATAGACCTTTATTTAAACTTGACCCAATTTACTTTAATAAACTCAGTTGACC
Protein sequenceShow/hide protein sequence
MNQESHRTSPSPLMVKPESQDRKPSSAAAVSKKIVIKSADMFGDMQKEAIDIAIAAFEKHSVEKDVAEHIKKEFDKNHGPTWHCIVGRNFDLELNAKCFDLKLICHLFIC
DTRDEPFCLLLPGSESSFTFQIWLMIVLPLKRMPPIWRACVNDATTISCMYNLVCQYVNHLVLHFLYCN