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ClCG05G006270 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G006270
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionExopolygalacturonase-like
Genome locationCG_Chr05:6244527..6244739
RNA-Seq ExpressionClCG05G006270
SyntenyClCG05G006270
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016798 - hydrolase activity, acting on glycosyl bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049518.1 exopolygalacturonase-like [Cucumis melo var. makuwa]8.1e-1571.43Show/hide
Query:  MKLS--LLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKLS  LLLFS LLA      NFSAA GFD+ LPPSYP E P GDPW GLRVFDV+DYGAVADGKT ++L
Subjt:  MKLS--LLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

KAE8650398.1 hypothetical protein Csa_010965 [Cucumis sativus]2.1e-1572.86Show/hide
Query:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKL  SL LFSSLLA++L     SAA GFD+ LPPSYP E P GDPW GLRVFDVNDYG VADGKT NSL
Subjt:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

XP_004134495.1 exopolygalacturonase [Cucumis sativus]2.1e-1572.86Show/hide
Query:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKL  SL LFSSLLA++L     SAA GFD+ LPPSYP E P GDPW GLRVFDVNDYG VADGKT NSL
Subjt:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

XP_023539060.1 exopolygalacturonase-like [Cucurbita pepo subsp. pepo]8.4e-1261.84Show/hide
Query:  MKLS-LLLFSSLLALSLSPRNF-------SAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKLS L++F  LLA+S+S RNF       SAAG +D LL P    E P GDPW GL VFDV DYGA+ADGKTENSL
Subjt:  MKLS-LLLFSSLLALSLSPRNF-------SAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

XP_038885913.1 exopolygalacturonase-like [Benincasa hispida]1.6e-2386.76Show/hide
Query:  MKLSLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKLSLL+FS LLALSLS RNFSAAG FD LLPPSY  ESP GDPWMGLRVFDVNDYGA+ADGKTENSL
Subjt:  MKLSLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

TrEMBL top hitse value%identityAlignment
A0A0A0L932 Uncharacterized protein1.0e-1572.86Show/hide
Query:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKL  SL LFSSLLA++L     SAA GFD+ LPPSYP E P GDPW GLRVFDVNDYG VADGKT NSL
Subjt:  MKL--SLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

A0A5A7U2P8 Exopolygalacturonase-like3.9e-1571.43Show/hide
Query:  MKLS--LLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL
        MKLS  LLLFS LLA      NFSAA GFD+ LPPSYP E P GDPW GLRVFDV+DYGAVADGKT ++L
Subjt:  MKLS--LLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCACTACTTTTATTCTCCTCTCTTCTGGCCCTTTCTCTATCTCCCCGCAATTTCTCTGCCGCCGGTGGATTTGATTTGCTTCTTCCGCCGTCGTACCCGGT
GGAGTCCCCCGGTGGAGATCCTTGGATGGGACTGCGTGTTTTTGATGTAAATGATTATGGGGCAGTTGCTGATGGAAAGACGGAGAACAGCTTGGTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTTCACTACTTTTATTCTCCTCTCTTCTGGCCCTTTCTCTATCTCCCCGCAATTTCTCTGCCGCCGGTGGATTTGATTTGCTTCTTCCGCCGTCGTACCCGGT
GGAGTCCCCCGGTGGAGATCCTTGGATGGGACTGCGTGTTTTTGATGTAAATGATTATGGGGCAGTTGCTGATGGAAAGACGGAGAACAGCTTGGTAAATTAA
Protein sequenceShow/hide protein sequence
MKLSLLLFSSLLALSLSPRNFSAAGGFDLLLPPSYPVESPGGDPWMGLRVFDVNDYGAVADGKTENSLVN