| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6574158.1 DNA-directed RNA polymerases II, IV and V subunit 6A, partial [Cucurbita argyrosperma subsp. sororia] | 2.5e-64 | 73.66 | Show/hide |
Query: YRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDP
Y+Y S ILIS FCCRYEDEPPEPE+EEGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDP
Subjt: YRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDP
Query: LEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVGGA
LEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVGGA
Subjt: LEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVGGA
|
|
| XP_004140788.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis sativus] | 7.4e-61 | 67.82 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG YEDEPPEPEIEEGAEEEL+NNNNDD+PGEPVEAEEKEDEEP+ R RKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| XP_022141284.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Momordica charantia] | 2.5e-61 | 69.31 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG YEDEPPEPE+EEGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| XP_022923151.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 3.0e-62 | 69.31 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG Y+DEPPEPE+EEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| XP_022944842.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 9.7e-61 | 67.82 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYND+DMG YEDEPPEPE+EEGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L8L8 Uncharacterized protein | 3.6e-61 | 67.82 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG YEDEPPEPEIEEGAEEEL+NNNNDD+PGEPVEAEEKEDEEP+ R RKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| A0A6J1CI61 DNA-directed RNA polymerases II, IV and V subunit 6A | 1.2e-61 | 69.31 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG YEDEPPEPE+EEGAEEELDNNNNDDV GEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| A0A6J1E614 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 1.5e-62 | 69.31 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG Y+DEPPEPE+EEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| A0A6J1HXF2 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 4.7e-61 | 67.82 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYND+DMG YEDEPPEPE+EEGAEEELDNNN DDVPGEPVEAE+KEDEEP+ERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| A0A6J1J2R7 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 1.5e-62 | 69.31 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYNDLDMG Y+DEPPEPE+EEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG +YEDWGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: GA
GA
Subjt: GA
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O88828 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 7.0e-22 | 46.75 | Show/hide |
Query: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
++EE +E LD+ N + G E VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPD
Subjt: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Query: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
G +YEDWGVDELI+ D
Subjt: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
|
|
| P61217 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 9.2e-22 | 46.75 | Show/hide |
Query: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
++EE +E LD+ N + G E VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPD
Subjt: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Query: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
G +YEDWGVDELI+ D
Subjt: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
|
|
| P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 7.0e-22 | 46.75 | Show/hide |
Query: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
++EE +E LD+ N + G E VE + + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP IRRYLPD
Subjt: EIEEGAEEELDNNNNDDVPG-EPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPD
Query: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
G +YEDWGVDELI+ D
Subjt: GRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVED
|
|
| Q9FJ98 DNA-directed RNA polymerases II, IV and V subunit 6A | 5.0e-52 | 59.2 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MAD+DYND+D + G YEDEP EPEIEEG EE+++ NDDV GEP+EAE+K + EPV+R RKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPDG ++E+WGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: G
G
Subjt: G
|
|
| Q9SJ96 DNA-directed RNA polymerases II and V subunit 6B | 1.4e-49 | 58.21 | Show/hide |
Query: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
MADDDYN++D + G YEDEP EPEIEEG EE+ D NDDV +P+E E+K + EPV+R RKTSKFMTKYERARILGTRALQI
Subjt: MADDDYNDLDMGNTGRYRYFSAPILISDFCCRYEDEPPEPEIEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKTSKFMTKYERARILGTRALQI
Query: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
SMNAPVMVELEGETDPLEIAMKELR+RKIPFTIRRYLPD +YE+WGVDELIVEDSWKRQVG
Subjt: SMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGRLGLLDLVLFISSIPIHLPAGVCRKLKTSEPVGWVGSLCAYEDWGVDELIVEDSWKRQVG
Query: G
G
Subjt: G
|
|
