; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G007940 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G007940
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
Genome locationCG_Chr05:8593099..8594899
RNA-Seq ExpressionClCG05G007940
SyntenyClCG05G007940
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014778.1 hypothetical protein SDJN02_22407 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-3052.56Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RN+RR LRLDRHL DTADSTLDSPQK+ K H+ SG                    +G S     
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

XP_022984701.1 uncharacterized protein LOC111482903 isoform X2 [Cucurbita maxima]8.1e-3153.21Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RNHRR LRLDRHL DTADSTLDSPQK+ K H+ SG                    +G S     
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

XP_023552559.1 uncharacterized protein LOC111810184 isoform X2 [Cucurbita pepo subsp. pepo]2.4e-3052.56Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RNHRR LRLDRHL DTADSTLDSP K+ K H+ SG                    +G S     
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]2.8e-3156.96Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRN-HRRCLRLDRHLPDTADSTLDSPQK-DTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYS
        ES VQFS+T PFWTNEKH+HFLNSMEASFV+SMFE+RN HRR LRLDRHLPDTADSTLDSPQK DTKNHATS E+  +               NG S   
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRN-HRRCLRLDRHLPDTADSTLDSPQK-DTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYS

Query:  LGRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
          R +  +P ++     DQ               VVPQ+EKRAVEDEDE DHP+S +N
Subjt:  LGRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]3.7e-3156.33Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRN-HRRCLRLDRHLPDTADSTLDSPQK-DTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYS
        ES VQFS+T PFWTNEKH+HFLNSMEASFV+SMFE+RN HRR LRLDRHLPDTADSTLDSPQK DTKNHATS                     NG S   
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRN-HRRCLRLDRHLPDTADSTLDSPQK-DTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYS

Query:  LGRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
          R +  +P ++     DQ               VVPQ+EKRAVEDEDE DHP+S +N
Subjt:  LGRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

TrEMBL top hitse value%identityAlignment
A0A6J1CHV7 uncharacterized protein LOC1110116404.4e-3055.41Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNH-RRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSL
        ES VQF++T   WTNEKH+HFLNSMEASFVRSMFE+R H RR LRLDRHLPDT+DSTLDSPQKD KNHATSG +                  +G S  S 
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNH-RRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSL

Query:  GRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
         R    +P ++   + DQ               VVPQMEKRAVEDEDE DHP+S IN
Subjt:  GRYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

A0A6J1E5I2 uncharacterized protein LOC111430892 isoform X18.2e-2950.64Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RN+RR L+LDRHL DTADSTLDSPQK+ K H+ S                 + D   +      
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

A0A6J1EAV1 uncharacterized protein LOC111430892 isoform X27.4e-3051.92Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RN+RR L+LDRHL DTADSTLDSPQK+ K H+ SG                    +G S     
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

A0A6J1J606 uncharacterized protein LOC111482903 isoform X23.9e-3153.21Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RNHRR LRLDRHL DTADSTLDSPQK+ K H+ SG                    +G S     
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X14.4e-3051.92Show/hide
Query:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG
        ES VQFS+T+PFWTNEKH+HFLNSMEASFVRSMF++RNHRR LRLDRHL DTADSTLDSPQK+ K H+ S                 + D   +      
Subjt:  ESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLG

Query:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN
        R +  +P +++    DQ               VVPQME+RAVEDEDE DHP+S +N
Subjt:  RYLFEMPESTVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCGGACGTGCAATTCAGCAAAACGGAGCCGTTTTGGACCAATGAGAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCAATGTTCGA
AAGTCGCAACCATCGCCGCTGTCTACGGCTGGACCGCCACTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCAGAAGGACACAAAAAACCATGCCACCTCCGGTG
AGTCGTTTAATGTTACATTTTTTCCCACTCATTTTCTAGCGCCTAAAAAATACGATAAAAATGGGAATAGTGAATATTCCTTAGGAAGATATTTATTTGAGATGCCAGAA
TCAACGGTAGATCTATCAGGAGATCAAGGAGGATATCATCTCTACCGCACACTTCGACTCAAGATCAGGCTAGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAAGATGA
AGATGAGAGTGACCATCCCATCTCATTTATCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCGGACGTGCAATTCAGCAAAACGGAGCCGTTTTGGACCAATGAGAAGCACGTGCACTTCTTGAATTCCATGGAAGCTTCTTTTGTCCGATCAATGTTCGA
AAGTCGCAACCATCGCCGCTGTCTACGGCTGGACCGCCACTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCAGAAGGACACAAAAAACCATGCCACCTCCGGTG
AGTCGTTTAATGTTACATTTTTTCCCACTCATTTTCTAGCGCCTAAAAAATACGATAAAAATGGGAATAGTGAATATTCCTTAGGAAGATATTTATTTGAGATGCCAGAA
TCAACGGTAGATCTATCAGGAGATCAAGGAGGATATCATCTCTACCGCACACTTCGACTCAAGATCAGGCTAGTGGTCCCACAGATGGAAAAGAGAGCAGTTGAAGATGA
AGATGAGAGTGACCATCCCATCTCATTTATCAACTAA
Protein sequenceShow/hide protein sequence
MEESDVQFSKTEPFWTNEKHVHFLNSMEASFVRSMFESRNHRRCLRLDRHLPDTADSTLDSPQKDTKNHATSGESFNVTFFPTHFLAPKKYDKNGNSEYSLGRYLFEMPE
STVDLSGDQGGYHLYRTLRLKIRLVVPQMEKRAVEDEDESDHPISFIN