; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G007987 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G007987
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMyb transcription factor
Genome locationCG_Chr05:8639377..8639949
RNA-Seq ExpressionClCG05G007987
SyntenyClCG05G007987
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439216.1 PREDICTED: transcription factor LAF1-like isoform X1 [Cucumis melo]1.0e-5587.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

XP_008439218.1 PREDICTED: transcription factor LAF1-like isoform X2 [Cucumis melo]1.1e-5791.94Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQ
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN+WS+IAQ
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQ

Query:  HLVGRTDNEIKNYWNSHLKKKVVS
        HL GRTDNEIKNYWNSHLKKKVVS
Subjt:  HLVGRTDNEIKNYWNSHLKKKVVS

XP_008439219.1 PREDICTED: transcription factor LAF1-like isoform X3 [Cucumis melo]1.0e-5587.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

XP_008439220.1 PREDICTED: transcription factor LAF1-like isoform X4 [Cucumis melo]1.0e-5587.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

XP_011652772.1 LOW QUALITY PROTEIN: transcription factor LAF1 [Cucumis sativus]8.8e-5587.2Show/hide
Query:  MESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRT
        M   ETEKEK KKKGL SPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN+WS+IAQHL GRT
Subjt:  MESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRT

Query:  DNEIKNYWNSHLKKKVVSGLEDSKS
        DNEIKNYWNSHLKKKVV   +D KS
Subjt:  DNEIKNYWNSHLKKKVVSGLEDSKS

TrEMBL top hitse value%identityAlignment
A0A072W078 Myb transcription factor7.3e-4779.31Show/hide
Query:  EKEKRK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIK
        EK K K +KGLWSPEED KLR++ILK+GHGCW+SVPIKAGL RN KSCRLRWINYLRPGLKRG FS+QEEE ILTLHH+LGNKWS+IAQHL GRTDNEIK
Subjt:  EKEKRK-KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIK

Query:  NYWNSHLKKKVVSGLE
        NYW+S+LKK+V   +E
Subjt:  NYWNSHLKKKVVSGLE

A0A1S3AXV7 transcription factor LAF1-like isoform X25.4e-5891.94Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQ
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN+WS+IAQ
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQ

Query:  HLVGRTDNEIKNYWNSHLKKKVVS
        HL GRTDNEIKNYWNSHLKKKVVS
Subjt:  HLVGRTDNEIKNYWNSHLKKKVVS

A0A1S3AY85 transcription factor LAF1-like isoform X45.0e-5687.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

A0A1S3AYA7 transcription factor LAF1-like isoform X35.0e-5687.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

A0A1S3AYW8 transcription factor LAF1-like isoform X15.0e-5687.69Show/hide
Query:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K
        QRREREM   ETEKEK KKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRW NYLRPGLKRGMFSQQE+EKILTLH LLGN      +
Subjt:  QRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGN------K

Query:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS
        WS+IAQHL GRTDNEIKNYWNSHLKKKVVS
Subjt:  WSKIAQHLVGRTDNEIKNYWNSHLKKKVVS

SwissProt top hitse value%identityAlignment
P20027 Myb-related protein Hv332.7e-3867.59Show/hide
Query:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW
        + + +KGLWSPEEDEKL + I+++G GCW+SVP  A L R  KSCRLRWINYLRP LKRG FSQQEE+ I+ LH +LGN+WS+IA HL GRTDNEIKN+W
Subjt:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW

Query:  NSHLKKKV
        NS +KKK+
Subjt:  NSHLKKKV

Q8LPH6 Transcription factor MYB862.7e-3868.52Show/hide
Query:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW
        +++ +KGLWSPEEDEKL ++I ++GHGCW+SVP  AGL R  KSCRLRWINYLRP LKRG FSQ EE  I+ LH  LGN+WS+IA  L GRTDNEIKN+W
Subjt:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW

Query:  NSHLKKKV
        NS LKKK+
Subjt:  NSHLKKKV

Q9C6U1 Transcription factor MYB835.1e-3762.83Show/hide
Query:  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYWNSHL
        +KGLWSP+EDEKL  ++L NG GCW+ +   AGLLR  KSCRLRWINYLRP LKRG FS QEE+ I  LH +LGN+WS+IA  L GRTDNEIKN+WNS L
Subjt:  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYWNSHL

Query:  KKKVVSGLEDSKS
        KK++ +   ++ S
Subjt:  KKKVVSGLEDSKS

Q9LTV4 Transcription factor MYB101.3e-3765.49Show/hide
Query:  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYWNSHL
        K+G WS EE E+LRSFILKNGH  W S+P  AGL+R  KSCRLRWINYLRPGLKRG F+++EE+ I+ LH   GNKWSKIA +  GRTDNEIKN WN+HL
Subjt:  KKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYWNSHL

Query:  KKKVVSGLEDSKS
        KK++V     S S
Subjt:  KKKVVSGLEDSKS

Q9M0K4 Transcription factor LAF16.6e-4572.36Show/hide
Query:  ETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEI
        +T+  +R +KGLWSPEEDEKLRSFIL  GH CWT+VPIKAGL RN KSCRLRWINYLRPGLKR M S +EEE ILT H  LGNKWS+IA+ L GRTDNEI
Subjt:  ETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEI

Query:  KNYWNSHLKKKVV--SGLEDSKS
        KNYW+SHLKKK +    L+D+KS
Subjt:  KNYWNSHLKKKVV--SGLEDSKS

Arabidopsis top hitse value%identityAlignment
AT3G13890.2 myb domain protein 261.9e-3965.45Show/hide
Query:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW
        +++ K+GLWSPEEDEKL ++I   GHGCW+SVP  AGL R  KSCRLRWINYLRP LKRG FS QE   I+ LH +LGN+W++IA+HL GRTDNE+KN+W
Subjt:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW

Query:  NSHLKKKVVS
        NS +KKK++S
Subjt:  NSHLKKKVVS

AT3G48920.1 myb domain protein 458.3e-4364.1Show/hide
Query:  EMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGR
        E  + E + +++++KGLWSPEEDEKLRS +LK GHGCW+++P++AGL RN KSCRLRW+NYLRPGLK+ +F++QEE  +L+LH +LGNKWS+I++ L GR
Subjt:  EMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGR

Query:  TDNEIKNYWNSHLKKKV
        TDNEIKNYW+S+LKK V
Subjt:  TDNEIKNYWNSHLKKKV

AT4G25560.1 myb domain protein 184.7e-4672.36Show/hide
Query:  ETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEI
        +T+  +R +KGLWSPEEDEKLRSFIL  GH CWT+VPIKAGL RN KSCRLRWINYLRPGLKR M S +EEE ILT H  LGNKWS+IA+ L GRTDNEI
Subjt:  ETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEI

Query:  KNYWNSHLKKKVV--SGLEDSKS
        KNYW+SHLKKK +    L+D+KS
Subjt:  KNYWNSHLKKKVV--SGLEDSKS

AT5G26660.1 myb domain protein 861.9e-3968.52Show/hide
Query:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW
        +++ +KGLWSPEEDEKL ++I ++GHGCW+SVP  AGL R  KSCRLRWINYLRP LKRG FSQ EE  I+ LH  LGN+WS+IA  L GRTDNEIKN+W
Subjt:  EKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNEIKNYW

Query:  NSHLKKKV
        NS LKKK+
Subjt:  NSHLKKKV

AT5G52260.1 myb domain protein 193.0e-4567.2Show/hide
Query:  MESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRT
        M  +    ++R++KGLWSPEED+KL+SFIL  GH CWT+VPI AGL RN KSCRLRWINYLRPGLKRG FS++EEE ILTLH  LGNKWS+IA++L GRT
Subjt:  MESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRT

Query:  DNEIKNYWNSHLKKKVVSGLEDSKS
        DNEIKNYW+S+LKK+ +      KS
Subjt:  DNEIKNYWNSHLKKKVVSGLEDSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGAAGAGAAAGAGAAATGGAAAGTACAGAAACAGAGAAAGAAAAAAGAAAGAAGAAAGGGTTATGGTCACCTGAGGAAGATGAAAAGTTGAGAAGCTTCATCCT
CAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGGTTACTAAGAAACTCAAAGAGCTGCAGATTGAGATGGATTAATTACCTAAGGCCAGGGCTGAAAA
GAGGAATGTTTAGCCAACAAGAAGAAGAGAAAATCTTGACCCTTCATCACTTGTTAGGCAACAAGTGGTCTAAGATAGCGCAGCATTTAGTAGGAAGAACAGACAACGAG
ATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTTGTCTCGGGTTTGGAGGATTCTAAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGAAGAGAAAGAGAAATGGAAAGTACAGAAACAGAGAAAGAAAAAAGAAAGAAGAAAGGGTTATGGTCACCTGAGGAAGATGAAAAGTTGAGAAGCTTCATCCT
CAAGAATGGCCATGGCTGCTGGACCTCTGTCCCCATTAAAGCTGGGTTACTAAGAAACTCAAAGAGCTGCAGATTGAGATGGATTAATTACCTAAGGCCAGGGCTGAAAA
GAGGAATGTTTAGCCAACAAGAAGAAGAGAAAATCTTGACCCTTCATCACTTGTTAGGCAACAAGTGGTCTAAGATAGCGCAGCATTTAGTAGGAAGAACAGACAACGAG
ATAAAGAACTATTGGAATTCTCATCTGAAGAAGAAAGTTGTCTCGGGTTTGGAGGATTCTAAAAGTTGA
Protein sequenceShow/hide protein sequence
MQRREREMESTETEKEKRKKKGLWSPEEDEKLRSFILKNGHGCWTSVPIKAGLLRNSKSCRLRWINYLRPGLKRGMFSQQEEEKILTLHHLLGNKWSKIAQHLVGRTDNE
IKNYWNSHLKKKVVSGLEDSKS