; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

ClCG05G008100 (gene) of Watermelon (Charleston Gray) v2.5 genome

Gene IDClCG05G008100
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDNA-directed RNA polymerase III subunit RPC3
Genome locationCG_Chr05:8713268..8720307
RNA-Seq ExpressionClCG05G008100
SyntenyClCG05G008100
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR008806 - RNA polymerase III Rpc82, C -terminal
IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR039748 - DNA-directed RNA polymerase III subunit RPC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574180.1 DNA-directed RNA polymerase III subunit RPC3, partial [Cucurbita argyrosperma subsp. sororia]1.5e-27089.7Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRPIPDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+T+Q+SGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

XP_022945853.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita moschata]9.8e-27089.33Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRPIPDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+ +Q+SGDADGIILWRANFDEF+RCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

XP_022968436.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita maxima]8.3e-26989.33Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRPIPDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+ +Q+SGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPR+SLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

XP_023541704.1 DNA-directed RNA polymerase III subunit RPC3 [Cucurbita pepo subsp. pepo]4.8e-26989.14Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRP PDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+ +Q+SGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+T+PRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]8.5e-28293.82Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSN+LHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKL KDKDCEELLEGLLQNGRLSMEQMVERAQSSK A            GNRPIPD+VHDSL KLL AHFVERCPAPEP+LSPKVEEQPPP+K
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAKISEVPETLEQR+VESARPMEVLRFSMGDTNTEA KSEHYSQISGQKRKHDDLE VQDSGDAD +ILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLS+LGCPGMDDY+INLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEE+KELLSLPPDNRN
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
        EPL KRF+RL+ VRGLLQSSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

TrEMBL top hitse value%identityAlignment
A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC35.6e-26388.39Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLRKGPLTLRLLIRFTELT SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KF+AIAS+KL +DK+C+ELLEGLLQNGRLSMEQ+VERA+SS  A            GN PI DVVHDSL KLL AHFVERCPAPEPTLSPKVEE PPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAKISEVPETLEQRL+E+ARP+EVLRFSMGDTN EA KSEH+SQISGQKRKHDDLE  QDSGDADG ILWRAN+DEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGCPGMDDYKINLR+IIEQAQ DEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+EE+KELLSLP DN N
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
        +PL K+ +   NVR LL+SSL+KLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC34.6e-26588.2Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLRKGPLTLRLLIRFTELT SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIAS+KL +DK+C+ELLEGLLQNGRLSMEQMVERA+SS  A            GNRPIPDVVHDSL KLL AHFVERCPAPEPTLSPKVEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAKI EVPETLEQRL+E+ARP+EVLRFSMGDTN EA KSEHYSQISGQKRKHD+LE  QDSG ADG ILWRAN+DEFIRCLRHKAC+EHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        GVVNVLSA LEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGCPGMDDYKINLR+I+EQAQ DEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+EE+KELLSLP DN N
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
        +PL K+ +    VR LL+SSL+KLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

A0A6J1CHB3 DNA-directed RNA polymerase III subunit RPC31.2e-26589.89Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQ GIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTEL SSQVNNSLLILIQHNCVQAFT+VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLA+ASEKLEKDK+CEELLEGLLQNGRLSMEQ+VERA+SSK A            GNRPIPDVVH+SL KLLTAHFVERCPAPEP LS +VEEQPPP+K
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAKISEVPETLEQRLV  ARPMEVLRFSM +TNTEA KSE    ISGQKRKHD+LE VQ+SGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        GVVNVLSAILEATRSSEK VKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQI+EVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LS+TGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALT PRHSLCLLWRVD+YNLWEHVLDEMYHASLNLQLRQAYEME+DKELLSLPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC34.7e-27089.33Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRPIPDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+ +Q+SGDADGIILWRANFDEF+RCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

A0A6J1HUV1 DNA-directed RNA polymerase III subunit RPC34.0e-26989.33Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
        M  TQYGIKYAVHIITAHFGNLVAKVCETLLR+GPLTLRLLIRFTEL+SSQ+NNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFS

Query:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK
        KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQ++ERA+SSK A            GNRPIPDVV++SL KLL AHFVERCPAPEPTLSP+VEEQPPPRK
Subjt:  KFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRK

Query:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
        RGAKAAK+SEVP TLEQRLVESARPMEV+RFS+G+TNTEA +SEHYS ISGQKRK  DL+ +Q+SGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD
Subjt:  RGAKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDD

Query:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF
        G VNVLSAILEATRSSEKIVKTEITVPLSL+NIYEEVMKNEVGRSMTLDRVEASLSALGC GM+DYKINL+KIIEQAQIDEVESIVLKRYGRDAYRMFRF
Subjt:  GVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRF

Query:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN
        LSKTGGLVETEKISDS+FVDKNEAPKILYRLWKDEYLYMEKVA+TVPR+SLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME+DKELL+LPPD R 
Subjt:  LSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRN

Query:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         PL+KR+NRLRNVR LL+SSLLKLDDALMLFHDF
Subjt:  EPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

SwissProt top hitse value%identityAlignment
Q2TBL4 DNA-directed RNA polymerase III subunit RPC36.8e-2425.45Show/hide
Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQHN V          +    +   +Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG
        +  A + L  D   E ++E LL NG+++M  +V+     K A +    +     G       V ++  +L+  HFV+RCP    T +      PP     
Subjt:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG

Query:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV
        A    +SE    L  +L    +     R S  +  T   K++        K+  D+ E + D G     I W+AN D F +  R +A +  V ++ D   
Subjt:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV

Query:  VNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGR
          ++  +L   R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL K +       +ES+V +R+G 
Subjt:  VNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGR

Query:  DAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDK
           R+FR + +   L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +E+K
Subjt:  DAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDK

Query:  ELL
         LL
Subjt:  ELL

Q55FJ5 DNA-directed RNA polymerase III subunit rpc32.0e-1520.44Show/hide
Query:  YGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTSSQVNNSLLILIQHNCV---QAFTAVTEGEF-----GDAPKADTQYLALFSNI
        Y  K A+ I+   FG+ V KV E L+++G  + +++ +       LT  ++   LL+LIQHN V   +    +T+ E      G+   +D+ Y A+  N 
Subjt:  YGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTSSQVNNSLLILIQHNCV---QAFTAVTEGEF-----GDAPKADTQYLALFSNI

Query:  LHRMRFSKFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVE
        +HR+RF KF+     K  K  +   +LE L+ +GRL M+ ++++A   +         V  F     I     D+ +KL+   F+ R P P P    +  
Subjt:  LHRMRFSKFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVE

Query:  E--QPPPRKRGAKAAKISEV---------PETLE----------QRLVESARPMEVLRFSMGDTNTEAGKSEHYSQIS--------------------GQ
               +K G   A  + V         P  L             +  SA   E L    G ++T    S+     +                    G+
Subjt:  E--QPPPRKRGAKAAKISEV---------PETLE----------QRLVESARPMEVLRFSMGDTNTEAGKSEHYSQIS--------------------GQ

Query:  KRKHDDLETVQDSGDADGI---------------------------------------------------------------------ILWRANFDEFIR
        KRK  D+    D  + D +                                                                     +LW  N+++FI 
Subjt:  KRKHDDLETVQDSGDADGI---------------------------------------------------------------------ILWRANFDEFIR

Query:  CLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSALGC--PGM----------------D
          + KAC + V  + +     + +A+++  + S +  +  +T  +  +NI EE  ++ +  + M   ++E  LS +    P M                 
Subjt:  CLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKN-EVGRSMTLDRVEASLSALGC--PGM----------------D

Query:  DYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS------LCLLWRVD
         Y++N+  II   +   VESI+ +++G +  R+F+ L     L+E ++I++ + +  NE   +L+ + +   + +++    +PR S         L+ VD
Subjt:  DYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS------LCLLWRVD

Query:  RYNLWEHVLDEMYHASLNLQLRQAYEMEEDKE----LLSLPPDNRNEPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
           +     ++++ A  N + R   E+E  K+    L  L  D   E   K + +   +   L + +L LD+ L+  + F
Subjt:  RYNLWEHVLDEMYHASLNLQLRQAYEMEEDKE----LLSLPPDNRNEPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF

Q5XIL3 DNA-directed RNA polymerase III subunit RPC31.1e-2124.25Show/hide
Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG
          I + K       E ++E LL NG+++M  +V+     K A +    +     G       V ++  +L   HFV+RCP     L P  +   P     
Subjt:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG

Query:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV
        A    I+E    L  +L              G     + +       + + R  D+ E   D G     I W+ N D F +  R +A +  V ++ D   
Subjt:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV

Query:  VNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGR
          ++  +L   R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL K +       +ES++ +R+G 
Subjt:  VNVLSAILEATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGR

Query:  DAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDK
           R+FR + +   L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +E+K
Subjt:  DAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDK

Query:  ELL
         LL
Subjt:  ELL

Q9BUI4 DNA-directed RNA polymerase III subunit RPC34.0e-2425.6Show/hide
Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QHN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG
        +   ++ L  D   E ++E LL NG+L+M  +V+     K A +    +     G       V ++  +L   HFV+RCP+  PT        PPP    
Subjt:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG

Query:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFD---
        A    I+E    L  +L    +     R S  +      K++        K   D+ E + D G     I W+AN D F +  R +A +  V ++ D   
Subjt:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFD---

Query:  DGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYG
          +V  +  + E T SS        T PLS + I+        + K  + + +TL  D     +   G  G   Y INL K +       +ES+V +R+G
Subjt:  DGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYG

Query:  RDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEED
            R+FR + +    +E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +E+
Subjt:  RDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEED

Query:  KELL
        K LL
Subjt:  KELL

Q9D483 DNA-directed RNA polymerase III subunit RPC31.1e-2124.15Show/hide
Query:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKF

Query:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG
          I + K       E ++E LL NG+++M  +V+     K A +    +     G       V ++  +L   HFV+RCP    T S   +  PPP    
Subjt:  LAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRG

Query:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV
        A    I+E    L  +L    +           T     K   Y+         D+ E   D G     I W+ N D F +  R +A +  V ++ D   
Subjt:  AKAAKISEVPETLEQRLVESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGV

Query:  VNVLSAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDA
          ++  +L  +  +        T PLS + I+        + K  + + +TL  D     +   G  G   + INL K +       +ES++ +R+G   
Subjt:  VNVLSAILEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDA

Query:  YRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKEL
         R+FR + +   L E +++ D + +   EA  +LY++  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R+ +E +E+K L
Subjt:  YRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKEL

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT3G49000.1 RNA polymerase III subunit RPC82 family protein2.6e-12745.99Show/hide
Query:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMR
        M M+++GI YA+HIIT  FG++V+KVCE LLRKGPL+ R + R  E  +  ++V + L +LIQHNCVQAF+   E   G   KA  QY+ LF+NILHR+R
Subjt:  MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMR

Query:  FSKFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPP
        ++KF  I +E+L  D  C  +L+GLL NGRL++ Q +ER + S               GN    + + DSL KL+ A FVER P+PEP L  K  E+ P 
Subjt:  FSKFLAIASEKLEKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPP

Query:  RKRGAKAAKISEVPETLEQRLVESARPMEVLRFSM-GDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQ
        ++RGAKAAKI + PETLE+++VE+A P++ +RF +  + ++ +  ++  S I+  KRK  D+    D+ D+   ++WR NF+EFI  LRHKAC+E V+ +
Subjt:  RKRGAKAAKISEVPETLEQRLVESARPMEVLRFSM-GDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQ

Query:  FDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGM----------DDYKINLRKIIEQAQIDEVESIVL
         D+G   VL A+LE  RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L               D Y ++ + II  AQ DE+E++V+
Subjt:  FDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCPGM----------DDYKINLRKIIEQAQIDEVESIVL

Query:  KRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME
        +RYG++A+RMFR+LS+ G  VET+KI+D++  +K + P+ L ++WKD YL+M+K+A+T P  ++  LLW+V++  +   +LDEMYHASLNL LR A+E+E
Subjt:  KRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYMEKVALTVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEME

Query:  EDKELLSLPPDNRNEPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF
         +KELL LP D    PLK+R  +++  R LL S++ KLDDA+MLFHDF
Subjt:  EDKELLSLPPDNRNEPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATGACTCAGTACGGCATCAAATATGCCGTCCACATTATCACTGCACACTTCGGAAATCTCGTCGCTAAAGTGTGCGAAACCCTGCTCCGAAAGGGACCTCTAAC
GCTGAGACTTCTTATACGATTCACAGAACTTACCTCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTTCAAGCCTTCACTGCAGTGACAGAAG
GTGAGTTTGGAGACGCACCCAAGGCTGATACACAATACTTGGCATTATTTAGTAATATACTTCATCGTATGAGATTTTCCAAATTCCTGGCAATTGCTTCGGAAAAGCTC
GAGAAAGATAAAGATTGTGAAGAACTTCTCGAGGGTCTCCTGCAGAATGGCAGGCTTTCAATGGAACAAATGGTTGAAAGAGCACAGTCAAGTAAAAGTGCAGGCAAGTT
TGTTACCTGCATTGTTTCTGCATTTATAGGAAACCGTCCAATCCCGGATGTTGTACATGACAGTCTATCTAAACTTTTGACTGCCCATTTTGTTGAACGCTGTCCAGCCC
CTGAACCAACTCTTTCACCCAAAGTTGAAGAACAGCCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTGCCAGAGACCTTAGAACAACGTCTTGTA
GAATCAGCACGCCCAATGGAAGTTCTAAGATTTTCAATGGGTGATACTAACACAGAAGCTGGAAAGAGTGAACATTATTCACAAATATCTGGACAGAAGCGCAAGCACGA
TGATCTGGAGACGGTGCAAGATTCTGGAGATGCAGATGGTATTATTCTTTGGCGTGCCAACTTTGATGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATG
TTAGATCACAGTTTGATGACGGAGTGGTAAATGTGTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATTGTGAAAACAGAGATAACAGTTCCTTTATCATTG
GATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTCTCCGCATTGGGTTGTCCGGGGATGGATGATTATAA
AATTAATTTACGGAAGATCATTGAACAAGCTCAAATTGATGAGGTTGAATCAATTGTTTTAAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTCCTGTCAAAAA
CTGGTGGCTTGGTTGAGACAGAAAAGATTTCCGATAGTTCATTTGTTGATAAGAATGAGGCGCCTAAAATTTTATATAGGTTGTGGAAGGATGAATACCTATACATGGAG
AAAGTAGCTCTAACAGTACCTAGGCATTCCCTATGCCTGTTGTGGAGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTT
GCAGCTACGACAGGCTTATGAGATGGAAGAAGACAAAGAGCTGCTGAGTCTTCCACCAGATAATCGCAACGAGCCGCTCAAGAAAAGATTTAATCGTTTGAGGAATGTCA
GAGGACTCCTGCAGTCGTCACTGCTGAAGCTCGACGATGCTCTAATGCTTTTCCATGACTTCTAA
mRNA sequenceShow/hide mRNA sequence
GGAAGCGGCTACATATACACTTGGAGAGAGAGGGCGTGTGAAATTTCTGCAGAGGGAGAAAAGGAAGCCGCCGGTGTGGGTCTCCCCATCCATCTGCTTCAGCGTCCGGT
TCGCTGTTACGTTACCAGCGTGCGTATTCTCCGGTTTGCAGGGGTATTTCAGTCGTGTGGGTCTCCGATTTAGAGAGGGTGTTTGTCCGGTGTTTGGGTCTCGGTTTCAG
AGGCCGTATTTGGTGCGTGGTCTCTCGGTAATCAGTGTGAGTTGGTAGACGGTAAAGTCGGCGATTGGGTCTCGGTCAAGGGGCGATTGGGTCCGTTTCGCTGTTATTGT
TATTTGGGTATATTGAACTATAAATTGTTGGTCGGTACTTAAGGATACTTGATGCCATAGACGCACAGCAATCTTAACGAAGGCAACCATGGTGATGACTCAGTACGGCA
TCAAATATGCCGTCCACATTATCACTGCACACTTCGGAAATCTCGTCGCTAAAGTGTGCGAAACCCTGCTCCGAAAGGGACCTCTAACGCTGAGACTTCTTATACGATTC
ACAGAACTTACCTCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTTCAAGCCTTCACTGCAGTGACAGAAGGTGAGTTTGGAGACGCACCCAA
GGCTGATACACAATACTTGGCATTATTTAGTAATATACTTCATCGTATGAGATTTTCCAAATTCCTGGCAATTGCTTCGGAAAAGCTCGAGAAAGATAAAGATTGTGAAG
AACTTCTCGAGGGTCTCCTGCAGAATGGCAGGCTTTCAATGGAACAAATGGTTGAAAGAGCACAGTCAAGTAAAAGTGCAGGCAAGTTTGTTACCTGCATTGTTTCTGCA
TTTATAGGAAACCGTCCAATCCCGGATGTTGTACATGACAGTCTATCTAAACTTTTGACTGCCCATTTTGTTGAACGCTGTCCAGCCCCTGAACCAACTCTTTCACCCAA
AGTTGAAGAACAGCCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTGCCAGAGACCTTAGAACAACGTCTTGTAGAATCAGCACGCCCAATGGAAG
TTCTAAGATTTTCAATGGGTGATACTAACACAGAAGCTGGAAAGAGTGAACATTATTCACAAATATCTGGACAGAAGCGCAAGCACGATGATCTGGAGACGGTGCAAGAT
TCTGGAGATGCAGATGGTATTATTCTTTGGCGTGCCAACTTTGATGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTTAGATCACAGTTTGATGACGG
AGTGGTAAATGTGTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATTGTGAAAACAGAGATAACAGTTCCTTTATCATTGGATAACATATATGAGGAGGTAA
TGAAGAATGAAGTAGGACGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTCTCCGCATTGGGTTGTCCGGGGATGGATGATTATAAAATTAATTTACGGAAGATCATT
GAACAAGCTCAAATTGATGAGGTTGAATCAATTGTTTTAAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTCCTGTCAAAAACTGGTGGCTTGGTTGAGACAGA
AAAGATTTCCGATAGTTCATTTGTTGATAAGAATGAGGCGCCTAAAATTTTATATAGGTTGTGGAAGGATGAATACCTATACATGGAGAAAGTAGCTCTAACAGTACCTA
GGCATTCCCTATGCCTGTTGTGGAGAGTAGACAGATATAATTTGTGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACAGGCTTATGAG
ATGGAAGAAGACAAAGAGCTGCTGAGTCTTCCACCAGATAATCGCAACGAGCCGCTCAAGAAAAGATTTAATCGTTTGAGGAATGTCAGAGGACTCCTGCAGTCGTCACT
GCTGAAGCTCGACGATGCTCTAATGCTTTTCCATGACTTCTAAATGAAGGATTTAGATTAATGGCTCATTGAGGAGTGGAGTGTATATGGAGGAAGCTTCTTTCAAACAT
CAGAAGAAAAATTGT
Protein sequenceShow/hide protein sequence
MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTSSQVNNSLLILIQHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKL
EKDKDCEELLEGLLQNGRLSMEQMVERAQSSKSAGKFVTCIVSAFIGNRPIPDVVHDSLSKLLTAHFVERCPAPEPTLSPKVEEQPPPRKRGAKAAKISEVPETLEQRLV
ESARPMEVLRFSMGDTNTEAGKSEHYSQISGQKRKHDDLETVQDSGDADGIILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSL
DNIYEEVMKNEVGRSMTLDRVEASLSALGCPGMDDYKINLRKIIEQAQIDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLWKDEYLYME
KVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRQAYEMEEDKELLSLPPDNRNEPLKKRFNRLRNVRGLLQSSLLKLDDALMLFHDF