CuGenDBv2

Gene ID	ClCG05G008430
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Sterol regulatory element-binding protein cleavage-activating protein, putative
Genome location	CG_Chr05:9088439..9089002
RNA-Seq Expression	ClCG05G008430
Synteny	ClCG05G008430
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021855 - PAM68-like

Homology

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GenBank top hits

e value

%identity

Alignment

TYK23016.1 putative Sterol regulatory element-binding protein cleavage-activating protein [Cucumis melo var. makuwa]

1.6e-78

83.51

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI
        MK+  CSFRQALL  KP P NQR   INDSTI+KN SNFTT+ RGQVQVNAKGFTGSPATAK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRI
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI

Query:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        LAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE  R
Subjt:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

XP_004150568.1 uncharacterized protein PAM68-like [Cucumis sativus]

3.7e-75

80.42

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITR
        MK+L CSF QALL S P PWNQR   IN STI+ NL+NFT T  RGQVQVNAKGFT SP TAK+RETTA+         NNNED+DDEIPEAVYSRIITR
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITR

Query:  ILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        ILAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE RR
Subjt:  ILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

XP_008439311.1 PREDICTED: uncharacterized protein PAM68-like [Cucumis melo]

2.5e-79

84.04

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI
        MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPATAK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRI
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI

Query:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        LAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE  R
Subjt:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

XP_023541387.1 uncharacterized protein PAM68-like [Cucurbita pepo subsp. pepo]

6.0e-73

75.94

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Query:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL
        MKALVCSFR AL  SKP PW QR++I+DST +KNL  FT + RGQ+Q+NAKGFTGSPATAKDRET  KK SGQNN+      +DDEIPEAV  RIITRIL
Subjt:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL

Query:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        AFVGVPMAFGVTL+KI +A+ EQ LW VPIWLPF T FLTFGAST+GIAYGTLSTSLDPEK+G+LFGW++AQKNWVEMWKEEDEA R
Subjt:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

XP_038877436.1 uncharacterized protein PAM68-like [Benincasa hispida]

2.7e-81

85.03

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Query:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL
        MKALVCSF QALL SKP PWNQR++INDSTI+K LSNFT   RGQVQVNAKGF+GSP+TAKDRE  AKK SGQ   NN  ED+DDEIPEAVYSRIITRIL
Subjt:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL

Query:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        AFVGVPMAFGVTLLKIFQAIKEQN+WDVPIWLPF TTFLTFGAST+GIAYGTLSTSLDPEKKGS+FGWE+AQKNWVEMWKEEDE  R
Subjt:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLM4 Uncharacterized protein

1.8e-75

80.42

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITR
        MK+L CSF QALL S P PWNQR   IN STI+ NL+NFT T  RGQVQVNAKGFT SP TAK+RETTA+         NNNED+DDEIPEAVYSRIITR
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFT-TSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITR

Query:  ILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        ILAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE RR
Subjt:  ILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

A0A1S3AZ57 uncharacterized protein PAM68-like

1.2e-79

84.04

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI
        MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPATAK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRI
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI

Query:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        LAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE  R
Subjt:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

A0A5A7STB5 Putative Sterol regulatory element-binding protein cleavage-activating protein

1.2e-79

84.04

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI
        MK+  CSFRQALL  KP P NQR   INDSTI+KNLSNFTT+ RGQVQVNAKGFTGSPATAK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRI
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI

Query:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        LAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE  R
Subjt:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

A0A5D3DHC5 Putative Sterol regulatory element-binding protein cleavage-activating protein

7.8e-79

83.51

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Query:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI
        MK+  CSFRQALL  KP P NQR   INDSTI+KN SNFTT+ RGQVQVNAKGFTGSPATAK+RET AK  SGQ    NNNED+DDEIPEAVYSRIITRI
Subjt:  MKALVCSFRQALLFSKPQPWNQRNK-INDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRI

Query:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        LAFVG+PMAFGVTLLKIFQAIKEQNLWDVPIW+PFFTTFLTFGAST+GIAYGTLSTSLDPEKKGS+ GWE+AQKNWVEMWKEEDE  R
Subjt:  LAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

A0A6J1CGP3 uncharacterized protein PAM68-like

3.8e-73

75.94

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Query:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL
        MKAL+CS+RQAL  S+P PW  R++INDSTI+KNL+N +   RG V+VNAKGFTG+PATAK+RE  A+K SGQNN++N   D+DDEI EAV +RIITRIL
Subjt:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL

Query:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR
        AFVGVPMAFGV LLKIF+ IKEQ +WDVPIWLPF TTFLTFGAST+GIAYGTLS SLDPEK+GSLFGWE+AQKNWVEMWKEEDEA R
Subjt:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

SwissProt top hits

e value

%identity

Alignment

O49668 Protein PAM68, chloroplastic

2.6e-18

36.43

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Query:  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLT
        KGF   P   K +++   K   Q++ ++++EDEDD+          IPE V +R+I+R+   VG+P+  G+     F  +K     DVP W+PF  +F+ 
Subjt:  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLT

Query:  FGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK
        FG +  G++YG +S+S DP ++GSL GW +A+KNW   W+
Subjt:  FGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK

Q9LTD9 Uncharacterized protein PAM68-like

9.4e-29

37.91

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Query:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL
        M+AL+CS R   L S  +   +    N  T+     N       ++    KGF  S            + S +    + + ++D  IP+ V+ R++ RI+
Subjt:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL

Query:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEE
          VG P+  GV +LK+ + +K++N+WDVP+W+P+ TT +TFG+S +GIAYG+LST+LDP K  SLFG ++A++NWVEMWKE+
Subjt:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEE

Arabidopsis top hits

e value

%identity

Alignment

AT4G19100.1 Protein of unknown function (DUF3464)

1.8e-19

36.43

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Query:  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLT
        KGF   P   K +++   K   Q++ ++++EDEDD+          IPE V +R+I+R+   VG+P+  G+     F  +K     DVP W+PF  +F+ 
Subjt:  KGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDE----------IPEAVYSRIITRILAFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLT

Query:  FGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK
        FG +  G++YG +S+S DP ++GSL GW +A+KNW   W+
Subjt:  FGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWK

AT5G52780.1 Protein of unknown function (DUF3464)

6.7e-30

37.91

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Query:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL
        M+AL+CS R   L S  +   +    N  T+     N       ++    KGF  S            + S +    + + ++D  IP+ V+ R++ RI+
Subjt:  MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRIL

Query:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEE
          VG P+  GV +LK+ + +K++N+WDVP+W+P+ TT +TFG+S +GIAYG+LST+LDP K  SLFG ++A++NWVEMWKE+
Subjt:  AFVGVPMAFGVTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEE

Sequences

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CDS sequence

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ATGAAAGCCCTAGTGTGTTCCTTTCGCCAAGCTCTCCTCTTCTCGAAGCCTCAGCCATGGAATCAAAGAAACAAAATCAACGACTCAACAATCTCGAAGAATCTCAGCAA
TTTCACAACATCATGCAGAGGCCAAGTCCAAGTAAACGCCAAGGGCTTCACTGGTTCTCCGGCGACAGCAAAAGACAGAGAAACCACCGCGAAAAAGCGTTCCGGCCAAA
ACAACAACAACAACAACAACGAAGACGAGGACGATGAAATTCCAGAAGCCGTATACAGCAGGATTATAACGAGAATCTTGGCTTTCGTCGGAGTTCCGATGGCCTTCGGT
GTGACATTGCTGAAGATTTTTCAGGCGATCAAGGAGCAAAACCTTTGGGATGTGCCGATTTGGCTGCCATTTTTTACTACTTTCTTGACATTCGGAGCTTCGACGGTGGG
AATTGCTTACGGGACGTTATCGACGAGTTTGGATCCGGAGAAGAAAGGATCTCTGTTCGGATGGGAAGATGCGCAGAAGAATTGGGTTGAAATGTGGAAGGAGGAAGATG
AAGCCAGGCGCTGA

mRNA sequence

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Protein sequence

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MKALVCSFRQALLFSKPQPWNQRNKINDSTISKNLSNFTTSCRGQVQVNAKGFTGSPATAKDRETTAKKRSGQNNNNNNNEDEDDEIPEAVYSRIITRILAFVGVPMAFG
VTLLKIFQAIKEQNLWDVPIWLPFFTTFLTFGASTVGIAYGTLSTSLDPEKKGSLFGWEDAQKNWVEMWKEEDEARR

ClCG05G008430 (gene) of Watermelon (Charleston Gray) v2.5 genome